prot_F-serratus_M_contig119.1474.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_F-serratus_M_contig119.1474.1
Unique Name	prot_F-serratus_M_contig119.1474.1
Type	polypeptide
Organism	Fucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length	559

Homology

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BLAST of mRNA_F-serratus_M_contig119.1474.1 vs. uniprot
Match: D7G4F1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4F1_ECTSI)

HSP 1 Score: 87.4 bits (215), Expect = 1.080e-14
Identity = 71/232 (30.60%), Postives = 108/232 (46.55%), Query Frame = 0

Query:   94 GSVYLWAA----MVDGAAAT---DAIAGWIILMAQISCYILILANSPRRTLDDLHDDLIVHVPIYKTQTIEDISFEVFSAYTSDGATFIKTRHSVEPVSYALSPISAAVYLVVTFAVGDLRTALALLQT-------------RTLYNMILGVAILASFVLLVLASLSILFFLANDNASFIVGAAAVLFISDLDEKLWTALQMVSTRSRIFWCIEAFSVSLVLAIAGIAWFGN 305
            GSVYLWA       DG A     +A+A W+IL+ Q  CY  +                                      +   G  F  +  S E + Y++  I+ ++YL+++ AV DL    AL+               R L+    GV ++A+ + L+ AS+ +LFF + DN + ++GAAAVLFI+D+DEK  T L+ VS + R+FW +E   +S VLA   +   GN
Sbjct:   51 GSVYLWACGERDQDDGEAPVTVPEAVAAWVILLTQAICYARL--------------------------------------WYVGGNEFTDSDTSSETIDYSMLAIAVSMYLLLSIAVADLCGGCALVVEGRGSGDEFVWFTGRRLF----GVFLVATLLTLIGASVRVLFFSSEDNVNLVIGAAAVLFIADVDEKAHTVLKNVSGKWRLFWVLEVIGMSFVLATFSVKATGN 240

[Close]

BLAST of mRNA_F-serratus_M_contig119.1474.1 vs. uniprot
Match: A0A6H5JP75_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JP75_9PHAE)

HSP 1 Score: 76.3 bits (186), Expect = 5.520e-11
Identity = 51/139 (36.69%), Postives = 80/139 (57.55%), Query Frame = 0

Query:  171 GATFIKTRHSVEPVSYALSPISAAVYLVVTFAVGDLRTALALLQT-------------RTLYNMILGVAILASFVLLVLASLSILFFLANDNASFIVGAAAVLFISDLDEKLWTALQMVSTRSRIFWCIEAFSVSLVLA 296
            G  F +   S E V Y++  I+ ++YL+++ AV DL    AL+               R L+    GV ++ +F+ L+ AS+ +LFF + DN + ++GAAAVLFI+D+DEK  T L+  S +SR+ W +E   +S VLA
Sbjct:   83 GNQFTEGDTSSETVDYSILAIAVSMYLLLSIAVADLCGGSALVVEGRGSGDDFVWFTGRRLF----GVFLVVTFLTLIGASVRVLFFSSQDNVTLVIGAAAVLFIADVDEKAHTVLKNFSGKSRLCWVLEIIGMSFVLA 217

The following BLAST results are available for this feature:

BLAST of mRNA_F-serratus_M_contig119.1474.1 vs. uniprot

BLAST of mRNA_F-serratus_M_contig119.1474.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D7G4F1_ECTSI	1.080e-14	30.60	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5JP75_9PHAE	5.520e-11	36.69	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 207..217
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 457..467
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 252..270
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 304..331
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..111
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 271..281
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 527..553
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 423..433
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 488..526
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 218..246
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 554..558
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 247..251
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 373..391
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 332..352
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 131..185
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 468..487
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 112..130
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 392..396
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 434..456
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 353..372
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 397..422
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 186..206
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 282..303
None	No IPR available	TMHMM	TMhelix		coord: 282..304
None	No IPR available	TMHMM	TMhelix		coord: 221..243
None	No IPR available	TMHMM	TMhelix		coord: 398..420
None	No IPR available	TMHMM	TMhelix		coord: 184..206
None	No IPR available	TMHMM	TMhelix		coord: 435..457
None	No IPR available	TMHMM	TMhelix		coord: 107..129
None	No IPR available	TMHMM	TMhelix		coord: 469..491
None	No IPR available	TMHMM	TMhelix		coord: 330..352
None	No IPR available	TMHMM	TMhelix		coord: 527..549

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
F-serratus_M_contig119	contig	F-serratus_M_contig119:642588..644852 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Fucus serratus MALE	2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90	2022-09-16
OGS1.0 of Fucus serratus male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_F-serratus_M_contig119.1474.1	mRNA_F-serratus_M_contig119.1474.1	Fucus serratus male	mRNA	F-serratus_M_contig119 641405..645315 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_F-serratus_M_contig119.1474.1 ID=prot_F-serratus_M_contig119.1474.1|Name=mRNA_F-serratus_M_contig119.1474.1|organism=Fucus serratus male|type=polypeptide|length=559bp
MTTPDRGEGARIHERARAFIGKCLPWSIKPIPQGLEGPVPRGAGDERFES
REAGRTGTSPITAPAAVSAAAPTSASAAAPTANLDELWKYLPQGSVYLWA
AMVDGAAATDAIAGWIILMAQISCYILILANSPRRTLDDLHDDLIVHVPI
YKTQTIEDISFEVFSAYTSDGATFIKTRHSVEPVSYALSPISAAVYLVVT
FAVGDLRTALALLQTRTLYNMILGVAILASFVLLVLASLSILFFLANDNA
SFIVGAAAVLFISDLDEKLWTALQMVSTRSRIFWCIEAFSVSLVLAIAGI
AWFGNTAATSSEGIDMLKGILGSTPVLFDTGFVVMIGLIGATVGAWEIAL
FLQHVAERYTGREEVRPRNLGNCLLLNVLVMGHQMCLLFSAKMPWGTFFL
LGLVVLPLVLSAAAGVAMYFPCCTNVLSRGRLKILLGVGIGYVISVGHRF
LFLIMYFLGLQGQWSVEYWGAVAFTAALSLFLAVSLVKAIGESFESHSVD
MSVLTWRLKCCRRDSVGNPGHGDDPTVFGAVMIVWGLYLCAEFFLVLAIT
VHFRDVML*