prot_F-serratus_M_contig1182.1457.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1182.1457.1
Unique Nameprot_F-serratus_M_contig1182.1457.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length189
Homology
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BLAST of mRNA_F-serratus_M_contig1182.1457.1 vs. uniprot
Match: D8LBV6_ECTSI (Heat shock protein 40 like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBV6_ECTSI)

HSP 1 Score: 111 bits (277), Expect = 1.220e-25
Identity = 76/195 (38.97%), Postives = 102/195 (52.31%), Query Frame = 0 
Query:    1 MFFGGMPAGGGGDMRRRGAGPF-----RVYRTGGGVRRGEGEGQQQGGSV-MNLLALLPFIMLLLLSLFGGQPEEV-YTFRQSSKHNIEKVTAPNTGVVEGIHYFVAPGFRQQYGGTREKLRRVEAQVTQTYKTYLRSECLDLHARRDQAKMKLRYRRSRLSREAYEQKVAELEAMLMPACDELVSKFNIYSKYN 188
            MFFG  P    G  RR+G G       RVYR GGGV RG G G  Q G++ MNLL LL  I+L+ L+LFGG+ +E  ++  ++S + + K T    GVV GI YFVAP FRQ+Y    E+LRR +                               +R  +  EAY+Q + E+E   +PAC+EL  KF+ +S YN
Sbjct:  237 MFFGQPP----GARRRQGRGGMPSFNTRVYRAGGGVDRGGGGGNGQEGAMGMNLLPLLGAIVLMFLTLFGGEQQEAAFSLERTSAYKVPKTTTQEKGVVGGIDYFVAPKFRQKYATNAERLRRAKR------------------------------KRRTMDSEAYDQLILEMETTPLPACEELAVKFSSHSTYN 397
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BLAST of mRNA_F-serratus_M_contig1182.1457.1 vs. uniprot
Match: A0A6H5JQ06_9PHAE (HSP40 like protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQ06_9PHAE)

HSP 1 Score: 108 bits (270), Expect = 2.120e-24
Identity = 69/140 (49.29%), Postives = 85/140 (60.71%), Query Frame = 0 
Query:    1 MFFGGMPAGGGGDMRRRGAGPF-----RVYRTGGGVRRGEGEGQ-QQGGSVMNLLALLPFIMLLLLSLFGGQPEEV-YTFRQSSKHNIEKVTAPNTGVVEGIHYFVAPGFRQQYGGTREKLRRVEAQVTQTYKTYLRSEC 133
            MFFG  P    G  RR+G G       RVYR GGGV RG G G  Q+G + MNLL LL  I+L+ L+LFGG+ +E  ++  ++S + I K T    GVV GI YFVAP FRQ+Y    E+LRRVE  VT+ YKT L   C
Sbjct:  268 MFFGQPP----GARRRQGRGGMPSFNTRVYRAGGGVDRGGGGGNGQEGATGMNLLPLLGAIVLMFLTLFGGEQQEAAFSLERTSAYKIPKTTTQEKGVVGGIDYFVAPKFRQKYATNAERLRRVEVAVTEQYKTNLILNC 403
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BLAST of mRNA_F-serratus_M_contig1182.1457.1 vs. uniprot
Match: A0DV75_PARTE (J domain-containing protein n=1 Tax=Paramecium tetraurelia TaxID=5888 RepID=A0DV75_PARTE)

HSP 1 Score: 52.4 bits (124), Expect = 8.550e-5
Identity = 36/99 (36.36%), Postives = 53/99 (53.54%), Query Frame = 0 
Query:   39 QQQGGSVMNLLALLPFIMLLLLSLFGG----QPEEVYTFRQSSKHNIEKVTAPNTGVVEGIHYFVAPGFRQQYGGTREKLRRVEAQVTQTYKTYLRSEC 133
            Q  G   M LL LLP IML+L S  G     Q   +Y+F++S  +     TA  T  ++ + Y+V   FR++   T+EKLR +E ++ Q Y   LR +C
Sbjct:  126 QNNGQGNMQLLQLLPIIMLILFSSSGFLNLFQSAPIYSFQRSYDYP----TAQTTKTLQ-VKYYVGNNFREEVS-TKEKLRELELEIEQHYVNQLRRDC 218
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1182.1457.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LBV6_ECTSI1.220e-2538.97Heat shock protein 40 like protein n=1 Tax=Ectocar... [more]
A0A6H5JQ06_9PHAE2.120e-2449.29HSP40 like protein n=1 Tax=Ectocarpus sp. CCAP 131... [more]
A0DV75_PARTE8.550e-536.36J domain-containing protein n=1 Tax=Paramecium tet... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 149..169
NoneNo IPR availablePANTHERPTHR43908FAMILY NOT NAMEDcoord: 1..177
NoneNo IPR availablePANTHERPTHR43908:SF3AT29763Pcoord: 1..177
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 66..188
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 45..65
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..44
NoneNo IPR availableTMHMMTMhelixcoord: 43..65
IPR015399Domain of unknown function DUF1977, DnaJ-likePFAMPF09320DUF1977coord: 68..177
e-value: 1.1E-14
score: 54.5

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1182contigF-serratus_M_contig1182:39300..51284 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1182.1457.1mRNA_F-serratus_M_contig1182.1457.1Fucus serratus malemRNAF-serratus_M_contig1182 36168..52316 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1182.1457.1 ID=prot_F-serratus_M_contig1182.1457.1|Name=mRNA_F-serratus_M_contig1182.1457.1|organism=Fucus serratus male|type=polypeptide|length=189bp
MFFGGMPAGGGGDMRRRGAGPFRVYRTGGGVRRGEGEGQQQGGSVMNLLA
LLPFIMLLLLSLFGGQPEEVYTFRQSSKHNIEKVTAPNTGVVEGIHYFVA
PGFRQQYGGTREKLRRVEAQVTQTYKTYLRSECLDLHARRDQAKMKLRYR
RSRLSREAYEQKVAELEAMLMPACDELVSKFNIYSKYN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015399DUF1977_DnaJ-like