prot_F-serratus_M_contig117.1403.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig117.1403.1
Unique Nameprot_F-serratus_M_contig117.1403.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length711
Homology
BLAST of mRNA_F-serratus_M_contig117.1403.1 vs. uniprot
Match: D7G1A2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1A2_ECTSI)

HSP 1 Score: 551 bits (1421), Expect = 8.730e-183
Identity = 423/879 (48.12%), Postives = 477/879 (54.27%), Query Frame = 0
Query:    1 MPPNLVALFAHVMSRASEGVRGSGSRAHSWEEVLQPAFS-----------------AGSTSPGPF-PMSAQDWRKAEAFSVQLQSLLTSRQSRCTSNGHS----RAAG----------------HYA--NGVIMACSSPFVAASAHSDESQTESSSSAISTVASSEGESVSHANGKVKG-RAKPTEMHAAHAGASGAPPAASIASTPNEA--TAWPRHHAPRVTPKEPSR---ATEPSAPTKVVGRVAASRRVNVSADGAVASLEVSHPVPGAFETPSHQS-----------------YLSAPPGA---------PAGGNPRGRDTSPSRYPARLRSRRFPQLGGTVESPELPQLRGLGQGAATYSVD--ERDQSHGARRLSPRNSHASMVRGEH----PQD---------W------------------------HGAARAGASAHEHGHDVRGVGG--GQRDGMTTRAA-PKAAHDLESAKGA--------LCGTYTSHADVGAVGSPATMEFRPAPPPIMSST--------AATCESNPRPEITA-RPRQVLQGG-RSVGRATLIPRSSVGGRNYTDNQVKQLGLIEAAVVSNATARDRAMYNLPRQGRTLTLTNVFKFVALRGAGAMYRLATEKQIEAHTGRHSNFFDGKIDARIVSTIRKDIDDEAITKSRKFSKVLLSLVAEGCNYPDCDWDHNSFTSENIANLQARIEEETGTSALQFCSDAV-------------------------------SPDGASTSGADAAVAARLSPVCPSNLAGASSGPSNGAPSKRRLDLGRD--GGQTPSPSVKRLRRDSRARST---------GLESTPTAGGSGSGNAKSPPKEEDDMRAAEVLQGLKGV 705
            MPPNL+ LFAHVMSRA+EG     + AH W+EVL  A                   +G+ SPGP  PMSAQDWRKAEAFSV LQSLL +R + C SNG S    R AG                +Y   +G    CS    A+S  +D  +        S       +S  HANG+ KG RAK      A A  SGA      A+TPN A  TAWP+H  P  TPKE S      EPSAP K VGRVA SRRVN  A+GAVASL VS   PGAFETP+H +                      PG              + RGR+ SPSRYPARLRSRRFPQLGG                A     D  E  QS G RRLSPR+S  + V  EH    P D         W                         G    G   H+ G    G  G  G+  GM TRAA PK +++L  A  A        L G  T     GAV SP  M+FRPAPPPIMS           A    +PR E+ A RPRQVLQGG RS GRA  +PRSSVGGRNYTDN VKQLGLIEAAVV++ATARDRA YNLPRQGRTLTLTNVFKF+ALRGAGAMYRLA +KQ+EAHTGRHSNFFDGKIDARIV  I+KDI DEAITKSRKFSK+LLSLVAEGC +PDCDWDH SFTSE IANLQAR+E  TGTSAL+FC+D                                 S    S+  + +A A                       SKRRLDLGRD  GGQTPSP +K+L+R +RAR T         G+ESTPTA     GN+KSPPKEEDDMRAAEVLQGLK +
Sbjct:   14 MPPNLMTLFAHVMSRANEGGSRGSAAAHGWDEVLNAAXXXXXXXXXXXXXXXXXXXSGTISPGPCCPMSAQDWRKAEAFSVHLQSLLAARDALCGSNGSSSSSSRGAGATTGXXXXXXXXXXXXYYGPQSGAEGRCSP---ASSGPADGREP-------SPFPGGRKDSTPHANGRAKGGRAK------APAAPSGA------AATPNNAAGTAWPQH-VPGATPKESSSRGGGEEPSAPIKAVGRVAVSRRVNGGAEGAVASLAVSRAGPGAFETPAHSTSHHXXXXXXXXXXXXXXXXXXXPGTVDSXXXXXXXXXNSLRGREHSPSRYPARLRSRRFPQLGGXXXXXXXXXXXXXXXRAGDAGADGLEGHQSQGGRRLSPRHSPPASVGREHGRGIPSDARRQHNAHGWVVTAGAEKRAAGXXXXXXXXXXXXRGEEEGGVFTHDGGRGHEGGXGRAGEGYGMRTRAAAPKGSYELGPAAVASSGPSSSPLPGACTPQITTGAVVSPVPMDFRPAPPPIMSXXXXXXXXXXVAAGRPSPRAEVAAPRPRQVLQGGGRSGGRAAPLPRSSVGGRNYTDNHVKQLGLIEAAVVASATARDRATYNLPRQGRTLTLTNVFKFIALRGAGAMYRLAMDKQVEAHTGRHSNFFDGKIDARIVGVIKKDIGDEAITKSRKFSKILLSLVAEGCTHPDCDWDHTSFTSEKIANLQARMEASTGTSALKFCADPAVFLAAXXXXXXXXXXXXXXXXXXXXXXXXXXSGSIPSSPLSGSAFAGXXXXXXXXXXXXXXXXXXXXXXSKRRLDLGRDDDGGQTPSPRLKKLKRAARARVTTAGSAAADGGVESTPTA----EGNSKSPPKEEDDMRAAEVLQGLKDI 865          
BLAST of mRNA_F-serratus_M_contig117.1403.1 vs. uniprot
Match: A0A835YUT3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUT3_9STRA)

HSP 1 Score: 187 bits (474), Expect = 1.020e-47
Identity = 88/142 (61.97%), Postives = 110/142 (77.46%), Query Frame = 0
Query:  438 RSSVGGRNYTDNQVKQLGLIEAAVVSNATARDRAMYNLPRQGRTLTLTNVFKFVALRGAGAMYRLATEKQIEAHTGRHSNFFDGKIDARIVSTIRKDIDDEAITKSRKFSKVLLSLVAEGCNYPDCDWDHNSFTSENIANLQ 579
            R+SVGGRNYTD Q++QL LIEA VV+ AT  D A +NLPRQ RTL LTN+FK++ALRGA  ++ +A  + +E  TGRHSNF+DGKID RIV+ ++ D+DD A T SRKFSKVLLSL+AEGC  P CDW + +F S+NI  LQ
Sbjct:  369 RTSVGGRNYTDEQLRQLQLIEAEVVARATPGDHAAFNLPRQARTLALTNMFKYIALRGAARLHAMAVARGLEGRTGRHSNFYDGKIDTRIVAVVKHDMDDAAATASRKFSKVLLSLLAEGCGDPSCDWSYATFASDNINRLQ 510          
BLAST of mRNA_F-serratus_M_contig117.1403.1 vs. uniprot
Match: A0A835YSU2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSU2_9STRA)

HSP 1 Score: 109 bits (273), Expect = 1.320e-21
Identity = 64/151 (42.38%), Postives = 88/151 (58.28%), Query Frame = 0
Query:  398 PPIMSSTAATCESNPRPEITARPRQVLQGGRSVGRATLIPRSSVGGRNYTDNQVKQLGLIEAAVVSNATARDRAMYNLPRQGRTLTLTNVFKFVALRGAGAMYRLATEKQIEAHTGRHSNFFDGKIDARIVSTIRKDIDDEAITKSRKFSK 548
            PP  +  A   E+    E+ A   Q  Q      RA    R+S          +  L  IEA V + AT  DRA ++LPRQ RTL LTN+FK++ALRGA  M+ LA  + +    G+HSNF+DGKIDAR+V+ +R+D+ D+  T++RKFSK
Sbjct:  260 PPAETIAAIAAENFTDAELDAALVQPQQ------RARFAVRASXXXXXXXXXXLAALQGIEARVAARATDADRAAFSLPRQARTLALTNMFKYIALRGAAQMHALAVLRGLHTCGGKHSNFYDGKIDARVVAIVRRDVGDDVATQTRKFSK 404          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig117.1403.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G1A2_ECTSI8.730e-18348.12Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YUT3_9STRA1.020e-4761.97Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YSU2_9STRA1.320e-2142.38Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 5..12
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 13..16
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 17..710
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..4
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..16

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig117contigF-serratus_M_contig117:721648..724278 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig117.1403.1mRNA_F-serratus_M_contig117.1403.1Fucus serratus malemRNAF-serratus_M_contig117 720726..724281 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig117.1403.1 ID=prot_F-serratus_M_contig117.1403.1|Name=mRNA_F-serratus_M_contig117.1403.1|organism=Fucus serratus male|type=polypeptide|length=711bp
MPPNLVALFAHVMSRASEGVRGSGSRAHSWEEVLQPAFSAGSTSPGPFPM
SAQDWRKAEAFSVQLQSLLTSRQSRCTSNGHSRAAGHYANGVIMACSSPF
VAASAHSDESQTESSSSAISTVASSEGESVSHANGKVKGRAKPTEMHAAH
AGASGAPPAASIASTPNEATAWPRHHAPRVTPKEPSRATEPSAPTKVVGR
VAASRRVNVSADGAVASLEVSHPVPGAFETPSHQSYLSAPPGAPAGGNPR
GRDTSPSRYPARLRSRRFPQLGGTVESPELPQLRGLGQGAATYSVDERDQ
SHGARRLSPRNSHASMVRGEHPQDWHGAARAGASAHEHGHDVRGVGGGQR
DGMTTRAAPKAAHDLESAKGALCGTYTSHADVGAVGSPATMEFRPAPPPI
MSSTAATCESNPRPEITARPRQVLQGGRSVGRATLIPRSSVGGRNYTDNQ
VKQLGLIEAAVVSNATARDRAMYNLPRQGRTLTLTNVFKFVALRGAGAMY
RLATEKQIEAHTGRHSNFFDGKIDARIVSTIRKDIDDEAITKSRKFSKVL
LSLVAEGCNYPDCDWDHNSFTSENIANLQARIEEETGTSALQFCSDAVSP
DGASTSGADAAVAARLSPVCPSNLAGASSGPSNGAPSKRRLDLGRDGGQT
PSPSVKRLRRDSRARSTGLESTPTAGGSGSGNAKSPPKEEDDMRAAEVLQ
GLKGVGASSG*
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