prot_F-serratus_M_contig1167.1368.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1167.1368.1
Unique Nameprot_F-serratus_M_contig1167.1368.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length333
Homology
BLAST of mRNA_F-serratus_M_contig1167.1368.1 vs. uniprot
Match: D7G8W0_ECTSI (C2 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8W0_ECTSI)

HSP 1 Score: 285 bits (729), Expect = 6.450e-92
Identity = 153/287 (53.31%), Postives = 206/287 (71.78%), Query Frame = 0
Query:   23 AEIRGDLTVKVMNGVNLKNMDVFGTCNPYVLVKLRSSVDSMTTAVKDGEDNPSWQETFIFRGVACTDGLQISLMEKEGGREGVVSVAEYIPPTLWGFPGIGGAEREVQVTMPSTAGRKSDRPSVGTVVIRLQYRAELPLRPAFGLLKMAAVKTGVLTEKAKIDYAVGVIINLLQLSSIPVTMVGGMADNMTKTQKIATG-SAIAIA---GMGVVTVLMALAIPVALVAIFFLPVTVIGGFALAVMAAVLAPVAMILGWIIFCTSPVQCRMWMPFVFWALLTVPYVNK 305
            A++ GDLTV+V+ G+NL+N+  FGTCNPYVL+K+ SS ++ TT V++ + NPSW ETFIFR VA TD LQISLMEKEG REGVVSV   +  T WGFPG+GG ER ++VTMP T    +  P++GTVV++LQYRA+L  R  FG++K AA KT +LT+KAKID  V  ++N+L     PV M  G+A  +TK QKI  G SA A++   G G    L+ALA+PV  +A+ FLP+T++GGF LAV   V+ P  + LGW++ C+ PVQCR+WMP++FWA+   P ++K
Sbjct:    4 ADVFGDLTVQVLRGINLQNLKAFGTCNPYVLLKMTSSPETKTTGVRESDANPSWHETFIFRNVASTDALQISLMEKEGSREGVVSVRGGVRATEWGFPGVGGGERVLEVTMPCTTDT-TGVPNMGTVVLKLQYRAQLKFRAPFGVIKTAAAKTAILTDKAKIDVVVDKVMNVLFK---PVAMAEGVAKRLTKAQKIIYGGSAAAVSSAVGGGASMTLLALAVPVLFMALLFLPLTLMGGFFLAVAMLVIMPCVLALGWVVLCSRPVQCRVWMPWLFWAMCKSPILHK 286          
BLAST of mRNA_F-serratus_M_contig1167.1368.1 vs. uniprot
Match: A0A251P601_PRUPE (C2 domain-containing protein n=7 Tax=Prunus TaxID=3754 RepID=A0A251P601_PRUPE)

HSP 1 Score: 55.8 bits (133), Expect = 5.550e-6
Identity = 26/76 (34.21%), Postives = 41/76 (53.95%), Query Frame = 0
Query:   26 RGDLTVKVMNGVNLKNMDVFGTCNPYVLVKLRSSVDSMTTAVKDGEDNPSWQETFIFRGVACTDGLQISLMEKEGG 101
            RG L V ++N   LKN ++FG  +PYV++  +      T A   G  NP W E+F+F      + L + +M+K+ G
Sbjct:    3 RGTLEVNLVNAKGLKNTEIFGKMDPYVVITCKKQQKKSTVATAMGS-NPEWNESFVFGISDDVNELHVMIMDKDSG 77          
BLAST of mRNA_F-serratus_M_contig1167.1368.1 vs. uniprot
Match: A0A6J5UV13_PRUAR (C2 domain-containing protein n=2 Tax=Prunus armeniaca TaxID=36596 RepID=A0A6J5UV13_PRUAR)

HSP 1 Score: 55.8 bits (133), Expect = 6.840e-6
Identity = 27/76 (35.53%), Postives = 41/76 (53.95%), Query Frame = 0
Query:   26 RGDLTVKVMNGVNLKNMDVFGTCNPYVLVKLRSSVDSMTTAVKDGEDNPSWQETFIFRGVACTDGLQISLMEKEGG 101
            RG L V ++N   LKN +VFG  +PYV++  +      T A   G  NP W E+F+F      + L + +M+K+ G
Sbjct:    3 RGTLEVNLVNAKGLKNTEVFGKMDPYVVITCKKQQKKSTVATAMGS-NPEWNESFVFGVSDDVNELHVMIMDKDTG 77          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1167.1368.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G8W0_ECTSI6.450e-9253.31C2 domain-containing protein n=2 Tax=Ectocarpus Ta... [more]
A0A251P601_PRUPE5.550e-634.21C2 domain-containing protein n=7 Tax=Prunus TaxID=... [more]
A0A6J5UV13_PRUAR6.840e-635.53C2 domain-containing protein n=2 Tax=Prunus armeni... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000008C2 domainSMARTSM00239C2_3ccoord: 28..128
e-value: 9.1E-6
score: 35.2
IPR000008C2 domainPFAMPF00168C2coord: 27..100
e-value: 2.1E-11
score: 44.0
IPR000008C2 domainPROSITEPS50004C2coord: 14..110
score: 11.744
IPR035892C2 domain superfamilyGENE3D2.60.40.150coord: 13..112
e-value: 6.6E-15
score: 57.1
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 250..254
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..185
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 221..249
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 280..285
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 286..303
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 186..209
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 304..332
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 210..220
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 255..279
NoneNo IPR availableSUPERFAMILY49562C2 domain (Calcium/lipid-binding domain, CaLB)coord: 20..99
NoneNo IPR availableTMHMMTMhelixcoord: 186..208
NoneNo IPR availableTMHMMTMhelixcoord: 258..280
NoneNo IPR availableTMHMMTMhelixcoord: 221..243

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1167contigF-serratus_M_contig1167:158074..166557 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1167.1368.1mRNA_F-serratus_M_contig1167.1368.1Fucus serratus malemRNAF-serratus_M_contig1167 157545..166742 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1167.1368.1 ID=prot_F-serratus_M_contig1167.1368.1|Name=mRNA_F-serratus_M_contig1167.1368.1|organism=Fucus serratus male|type=polypeptide|length=333bp
MSCLVLYRSLARAYSFEKKTSMAEIRGDLTVKVMNGVNLKNMDVFGTCNP
YVLVKLRSSVDSMTTAVKDGEDNPSWQETFIFRGVACTDGLQISLMEKEG
GREGVVSVAEYIPPTLWGFPGIGGAEREVQVTMPSTAGRKSDRPSVGTVV
IRLQYRAELPLRPAFGLLKMAAVKTGVLTEKAKIDYAVGVIINLLQLSSI
PVTMVGGMADNMTKTQKIATGSAIAIAGMGVVTVLMALAIPVALVAIFFL
PVTVIGGFALAVMAAVLAPVAMILGWIIFCTSPVQCRMWMPFVFWALLTV
PYVNKVRTHSQTLAPLHDRSQSLALYSYCTRT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000008C2_dom
IPR035892C2_domain_sf