prot_F-serratus_M_contig116.1327.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig116.1327.1
Unique Nameprot_F-serratus_M_contig116.1327.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length465
Homology
BLAST of mRNA_F-serratus_M_contig116.1327.1 vs. uniprot
Match: D8LN52_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN52_ECTSI)

HSP 1 Score: 645 bits (1665), Expect = 1.330e-229
Identity = 303/440 (68.86%), Postives = 361/440 (82.05%), Query Frame = 0
Query:    1 MFRVGWIFAADVASEFVPFTDIVSDVILLVSVWPSTQVFAPDDVEGCGERALWYLALAFTVIGTLVDLFPEMLLLTEIILHPGVFSSPSSMCKLTRLFFSDGKPVVVFASMDEHENPLDPSLVLIRDSLRRRLSSIAAGLFLRDGCLADLSPRWTYAGLVGLLVGGELLTAIGSSLFLRIEFGWPALISLLASLLALMISLRSHMREVGEKPLHRCTESPTDNGGRLGEFLLPGPVTFARYLMLVPVWPMILVYSESANFWPFTSSNPGDFSLPQSDEAMWVSPVDWLRIAVPELRVSDNNSPLSFIYWAIIPHLLWVLITGIWAVISGLARVFCWYVGHEEDWSAHSWGVYFASQESPFHVSSRRLQGALGLGFTTWVCKDLKRLLLFTAGLAVLCYQGYRRGTCMEQEWAFLFANAAWWIALIVAHIARRKNIFQPLS 440
            M +  W+ A D+A EFVPFTDI+SDVILL++VWP T V APDDVEGCGERALWYLAL+FTV+GTLVDLFPEMLL++EI LHP V +SP SM  L RL FSDGKPVVVFA+ +E E PL P L+ IRDSLRRRLSS+A   FLRDGC A  SP+WTYAGLVG+LVGGELLTAIG+ LFLRIEFGWPALISLLASLLAL+IS+R HMR VGEK LH C ES T NGGRL EFLLPGPVT  R+L+ VPVWPM+LVYSE A+FWPF+ ++ GD SLP S++++W +P DW R+AVP L  SDN+SPLS++YWAI+PHLLW L++ +W  + G A + CWY GH EDWSAHSWGVYF+SQESPF V S RLQ ALG+GFT W  ++ +RLL F+A LA +  QGYRRG C+EQEWAF+FA AAWWIA+++ H AR+KN+F+PL+
Sbjct:    1 MNKATWVIAIDIACEFVPFTDILSDVILLIAVWPRTAVIAPDDVEGCGERALWYLALSFTVVGTLVDLFPEMLLVSEIALHPSVLTSPGSMGTLLRLVFSDGKPVVVFAATEEFEKPLAPPLLAIRDSLRRRLSSVATAFFLRDGCGAS-SPKWTYAGLVGVLVGGELLTAIGACLFLRIEFGWPALISLLASLLALLISVRCHMRRVGEKTLHLCHESATGNGGRLFEFLLPGPVTLTRFLLAVPVWPMLLVYSEGASFWPFSMASRGDHSLPPSEDSLWANPWDWFRVAVPSLSRSDNDSPLSYVYWAIVPHLLWTLVSAVWVGLLGAANLVCWYFGHAEDWSAHSWGVYFSSQESPFSVWSARLQSALGMGFTAWAAREFRRLLAFSAALAAVVVQGYRRGACLEQEWAFVFAVAAWWIAVLIGHAARKKNMFKPLN 439          
BLAST of mRNA_F-serratus_M_contig116.1327.1 vs. uniprot
Match: A0A6H5JN14_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN14_9PHAE)

HSP 1 Score: 494 bits (1273), Expect = 1.010e-171
Identity = 237/342 (69.30%), Postives = 278/342 (81.29%), Query Frame = 0
Query:    1 MFRVGWIFAADVASEFVPFTDIVSDVILLVSVWPSTQVFAPDDVEGCGERALWYLALAFTVIGTLVDLFPEMLLLTEIILHPGVFSSPSSMCKLTRLFFSDGKPVVVFASMDEHENPLDPSLVLIRDSLRRRLSSIAAGLFLRDGCLADLSPRWTYAGLVGLLVGGELLTAIGSSLFLRIEFGWPALISLLASLLALMISLRSHMREVGEKPLHRCTESPTDNGGRLGEFLLPGPVTFARYLMLVPVWPMILVYSESANFWPFTSSNPGDFSLPQSDEAMWVSPVDWLRIAVPELRVSDNNSPLSFIYWAIIPHLLWVLITGIWAVISGLARVFCWYVGHEE 342
            M +  W+ A D+A EFVPFTDI+SDVILL++VWP T V APDDVEGCGERALWYLAL+FTV+GTLVDLFPEMLL++EI LHP V +SP SM  L RL FSDGKPVVVFA+ +E E PL P L+ IRDSLRRRLSS+A   FL DGC A  SP+WTYAGLVG+LVGGELLTAIG+ LFLRIEFGWPALISLLASLLAL+IS+R HMR VGEK LH C ES T NGGRL EFLLPGPVT  R+L+ VPVWPM+LVYSE A+FWPF+ ++ GD SLP S E++W +P DW R+AVP L  SDN+SP+S++YWAI+PHLLW L++ +W  + G A + CWY GH E
Sbjct:    1 MNKTTWVIAIDIACEFVPFTDILSDVILLIAVWPRTAVIAPDDVEGCGERALWYLALSFTVVGTLVDLFPEMLLVSEIALHPSVLTSPGSMGTLLRLVFSDGKPVVVFAATEEFEKPLAPPLLAIRDSLRRRLSSVATAFFLGDGCGAS-SPKWTYAGLVGVLVGGELLTAIGACLFLRIEFGWPALISLLASLLALLISVRCHMRRVGEKTLHLCHESATGNGGRLFEFLLPGPVTLTRFLLAVPVWPMLLVYSEGASFWPFSMASRGDHSLPPSGESLWANPWDWFRVAVPSLSRSDNDSPMSYVYWAIVPHLLWTLVSAVWVGLLGAANLVCWYFGHAE 341          
BLAST of mRNA_F-serratus_M_contig116.1327.1 vs. uniprot
Match: A0A6H5JNH5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNH5_9PHAE)

HSP 1 Score: 152 bits (385), Expect = 2.330e-41
Identity = 66/99 (66.67%), Postives = 81/99 (81.82%), Query Frame = 0
Query:  342 EDWSAHSWGVYFASQESPFHVSSRRLQGALGLGFTTWVCKDLKRLLLFTAGLAVLCYQGYRRGTCMEQEWAFLFANAAWWIALIVAHIARRKNIFQPLS 440
            EDWSAHSWGVYF+SQESPF V S RLQ ALG+GFT W  ++ +RLL F+A LA +  QGYRRG C+EQEWAF+FA AAWWI +++ H AR+KNIF+PL+
Sbjct:   10 EDWSAHSWGVYFSSQESPFSVWSWRLQSALGMGFTAWAAREFRRLLAFSAALAAVVVQGYRRGACLEQEWAFVFAVAAWWIVVLIGHAARKKNIFKPLN 108          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig116.1327.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LN52_ECTSI1.330e-22968.86Uncharacterized protein n=2 Tax=Ectocarpus silicul... [more]
A0A6H5JN14_9PHAE1.010e-17169.30Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JNH5_9PHAE2.330e-4166.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 51..69
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 328..382
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 156..176
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 177..181
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 238..255
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 182..201
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 383..401
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 70..155
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 413..430
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 202..237
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 431..464
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 402..412
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..50
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 306..327
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 256..305
NoneNo IPR availableTMHMMTMhelixcoord: 182..201
NoneNo IPR availableTMHMMTMhelixcoord: 411..430
NoneNo IPR availableTMHMMTMhelixcoord: 230..252
NoneNo IPR availableTMHMMTMhelixcoord: 306..328
NoneNo IPR availableTMHMMTMhelixcoord: 156..178

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig116contigF-serratus_M_contig116:703406..705279 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig116.1327.1mRNA_F-serratus_M_contig116.1327.1Fucus serratus malemRNAF-serratus_M_contig116 703406..706056 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig116.1327.1 ID=prot_F-serratus_M_contig116.1327.1|Name=mRNA_F-serratus_M_contig116.1327.1|organism=Fucus serratus male|type=polypeptide|length=465bp
MFRVGWIFAADVASEFVPFTDIVSDVILLVSVWPSTQVFAPDDVEGCGER
ALWYLALAFTVIGTLVDLFPEMLLLTEIILHPGVFSSPSSMCKLTRLFFS
DGKPVVVFASMDEHENPLDPSLVLIRDSLRRRLSSIAAGLFLRDGCLADL
SPRWTYAGLVGLLVGGELLTAIGSSLFLRIEFGWPALISLLASLLALMIS
LRSHMREVGEKPLHRCTESPTDNGGRLGEFLLPGPVTFARYLMLVPVWPM
ILVYSESANFWPFTSSNPGDFSLPQSDEAMWVSPVDWLRIAVPELRVSDN
NSPLSFIYWAIIPHLLWVLITGIWAVISGLARVFCWYVGHEEDWSAHSWG
VYFASQESPFHVSSRRLQGALGLGFTTWVCKDLKRLLLFTAGLAVLCYQG
YRRGTCMEQEWAFLFANAAWWIALIVAHIARRKNIFQPLSLIPRESGHGR
GVARITPAESYARS*
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