prot_F-serratus_M_contig116.1323.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig116.1323.1
Unique Nameprot_F-serratus_M_contig116.1323.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length657
Homology
BLAST of mRNA_F-serratus_M_contig116.1323.1 vs. uniprot
Match: D8LN51_ECTSI (Whsc1 protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN51_ECTSI)

HSP 1 Score: 149 bits (377), Expect = 9.360e-34
Identity = 98/229 (42.79%), Postives = 115/229 (50.22%), Query Frame = 0
Query:   50 GATRSLEVLEAGTRGYACLFEAIGGAIQAVVNAEAKPFREARTELPTLKAASRWVAIETSWGYARALASELFRMKNNDA------GQHSSIATSAALPMDM-----SDIAVPRVTATEHLVNVNGDVAGVDGGKDRKNRASARPEDGERERLERKTANNNTEEPLDARYCICRGGEGEHGGVMVCCDGCSEWFHDSCVGLSPSAVDDLDDYYCLVCCESQPGKYGQYAH 267
            G   S E L  G R Y CLF+A+G  +QAVV +EAKPFREAR  LP L+ A+RW AIE SWGYARALASEL   + NDA      G H + A   A  +D       + AV   +AT       GDV                                      D  YCICRGG+   GGVMV CD C EW+H SCVGL+     +L  Y CLVCCE+ P K+G Y H
Sbjct: 1361 GERPSSEPLGTGVRLYNCLFDAVGDILQAVVRSEAKPFREARNNLPALREATRWAAIEPSWGYARALASELSWRRENDAPADVAAGVHVAAAAPMAAAVDSWSPAPGEPAVGAQSATVVQEEQGGDV--------------------------------------DV-YCICRGGD--DGGVMVECDLCGEWYHASCVGLTAQTAGELQQYRCLVCCEAHPEKHGPYKH 1548          
BLAST of mRNA_F-serratus_M_contig116.1323.1 vs. uniprot
Match: A0A6H5JSL4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSL4_9PHAE)

HSP 1 Score: 119 bits (298), Expect = 5.620e-24
Identity = 93/240 (38.75%), Postives = 108/240 (45.00%), Query Frame = 0
Query:   50 GATRSLEVLEAGTRGYACLFEAIGGAIQAVVNAEAKPFREARTELPTLKAASRWVAIETSWGYARALASELFRMKNNDA------GQHSSIATSAAL--PMDMSDIAVPRVTATEHLVNVNGDVAGVDGGKDRKNRASARPEDGERERLERKTANNNTEEPLDARYCICRGGEGEHGGVMVCCDGCSEWFHDSCVGLSPSAVDDLDDYYCLVCCESQPGKYGQYAHSWTTNVAIEAAVRR 281
            G   S E L  G R Y CLF+A+G  +QAVV AEAKPFREAR  LP L+ A+RW AIE SWGYARALASELF  + N A      G H + A +A +   +D S  A    T       V  +  G D                                 +D  YCICR  EG+ GGVMV CD C EW+H                                 A  W+TNVAIEAAVRR
Sbjct: 1225 GERPSSEPLGTGVRLYTCLFDAVGDILQAVVKAEAKPFREARNNLPALREATRWAAIEPSWGYARALASELFWRRENAAPAAAARGVHVAAAAAAQMVAEVDSSSPAPGEPTVGAQSARVVQEEQGGD---------------------------------VDV-YCICR--EGDDGGVMVECDLCGEWYH---------------------------------ASWWSTNVAIEAAVRR 1395          
BLAST of mRNA_F-serratus_M_contig116.1323.1 vs. uniprot
Match: UPI001EE534B5 (PHD finger protein ALFIN-LIKE 7-like n=1 Tax=Haliotis rubra TaxID=36100 RepID=UPI001EE534B5)

HSP 1 Score: 61.6 bits (148), Expect = 2.290e-7
Identity = 24/57 (42.11%), Postives = 35/57 (61.40%), Query Frame = 0
Query:  207 YCICRGGEGEHGGVMVCCDGCSEWFHDSCVGLSPSAVDDLDDYYCLVCCESQPGKYG 263
            YC CR  + + GG M+ CDGC EWFH +CVG++ +  + +D+Y+C  C     G  G
Sbjct:  114 YCPCR--QPDDGGFMIACDGCDEWFHGACVGVTETMAEAMDEYHCPTCGSGAVGPLG 168          
BLAST of mRNA_F-serratus_M_contig116.1323.1 vs. uniprot
Match: A0A6J8B799_MYTCO (CXXC1 n=1 Tax=Mytilus coruscus TaxID=42192 RepID=A0A6J8B799_MYTCO)

HSP 1 Score: 62.0 bits (149), Expect = 4.400e-7
Identity = 29/74 (39.19%), Postives = 46/74 (62.16%), Query Frame = 0
Query:  207 YCICRGGEGEHGGVMVCCDGCSEWFHDSCVGLSPSAVDDLDDYYCLVCCESQPGKYGQYAHSWTTNVAIEAAVR 280
            YCIC+G +   G  M+ CDGC+EWF+ SCVG+SP   ++L +Y C  C E++  K      + +T++ +  +VR
Sbjct:  156 YCICKGLD--IGDFMLGCDGCTEWFYGSCVGISPQEAEELGEYLCQTCKEAKETK-----GATSTSIKLRRSVR 222          
BLAST of mRNA_F-serratus_M_contig116.1323.1 vs. uniprot
Match: A0A6J8E9P9_MYTCO (CXXC1 n=1 Tax=Mytilus coruscus TaxID=42192 RepID=A0A6J8E9P9_MYTCO)

HSP 1 Score: 62.4 bits (150), Expect = 9.360e-7
Identity = 26/52 (50.00%), Postives = 35/52 (67.31%), Query Frame = 0
Query:  207 YCICRGGEGEHGGVMVCCDGCSEWFHDSCVGLSPSAVDDLDDYYCLVCCESQ 258
            YCICRG + +    MV CDGC+EWFH  CVG+SP   ++L +Y C  C E++
Sbjct:  283 YCICRGPDIQD--FMVGCDGCTEWFHGRCVGISPQEAEELGEYLCQTCKEAK 332          
BLAST of mRNA_F-serratus_M_contig116.1323.1 vs. uniprot
Match: A0A8B6DIH2_MYTGA (COMPASS component SPP1 n=1 Tax=Mytilus galloprovincialis TaxID=29158 RepID=A0A8B6DIH2_MYTGA)

HSP 1 Score: 62.8 bits (151), Expect = 1.410e-6
Identity = 28/55 (50.91%), Postives = 35/55 (63.64%), Query Frame = 0
Query:  207 YCICRGGEGEHGGVMVCCDGCSEWFHDSCVGLSPSAVDDLDDYYCLVCCESQPGK 261
            YCICRG +   G  M+ CDGC+EWFH  CVG+SP   ++L +Y C  C E Q  K
Sbjct:  468 YCICRGPD--IGDFMIGCDGCTEWFHGRCVGISPQDGEELGEYLCKTCKEVQVTK 520          
BLAST of mRNA_F-serratus_M_contig116.1323.1 vs. uniprot
Match: A0A8B6HD80_MYTGA (Nucleosome-remodeling factor subunit BPTF n=1 Tax=Mytilus galloprovincialis TaxID=29158 RepID=A0A8B6HD80_MYTGA)

HSP 1 Score: 62.8 bits (151), Expect = 1.730e-6
Identity = 28/55 (50.91%), Postives = 35/55 (63.64%), Query Frame = 0
Query:  207 YCICRGGEGEHGGVMVCCDGCSEWFHDSCVGLSPSAVDDLDDYYCLVCCESQPGK 261
            YCICRG +   G  M+ CDGC+EWFH  CVG+SP   ++L +Y C  C E Q  K
Sbjct:  673 YCICRGPD--IGDFMIGCDGCTEWFHGRCVGISPQDGEELGEYLCKTCKEVQVTK 725          
BLAST of mRNA_F-serratus_M_contig116.1323.1 vs. uniprot
Match: A0A507CFN3_9FUNG (Uncharacterized protein n=2 Tax=Synchytrium endobioticum TaxID=286115 RepID=A0A507CFN3_9FUNG)

HSP 1 Score: 59.3 bits (142), Expect = 2.540e-5
Identity = 26/61 (42.62%), Postives = 35/61 (57.38%), Query Frame = 0
Query:  204 DARYCICRGGEGEHGGVMVCCDGCSEWFHDSCVGLSPSAVDDLDDYYCLVCCESQPGKYGQ 264
            DA YC+C+    E    MV CDGC +WFH  C+GLS +  D ++ Y C +C   Q G  G+
Sbjct: 1326 DATYCVCKSKYDEER-PMVQCDGCHDWFHLDCIGLSTAQADQMERYLCPICNPHQQGGVGK 1385          
BLAST of mRNA_F-serratus_M_contig116.1323.1 vs. uniprot
Match: A0A485KNS8_9STRA (Aste57867_9611 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KNS8_9STRA)

HSP 1 Score: 59.3 bits (142), Expect = 2.570e-5
Identity = 23/49 (46.94%), Postives = 32/49 (65.31%), Query Frame = 0
Query:  206 RYCICRGGEGEHGGVMVCCDGCSEWFHDSCVGLSPSAVDDLDDYYCLVC 254
            +YCICR     + G M+ C+GC +WFHD+CVG+S    + +DDY C  C
Sbjct: 1154 QYCICRQ---PYDGFMIGCEGCDDWFHDTCVGISKEKAEKVDDYVCPSC 1199          
BLAST of mRNA_F-serratus_M_contig116.1323.1 vs. uniprot
Match: A0A1E4TSM4_PACTA (PHD-type domain-containing protein n=1 Tax=Pachysolen tannophilus NRRL Y-2460 TaxID=669874 RepID=A0A1E4TSM4_PACTA)

HSP 1 Score: 57.8 bits (138), Expect = 3.630e-5
Identity = 28/59 (47.46%), Postives = 35/59 (59.32%), Query Frame = 0
Query:  198 NTEEPLDARYCICRGGEGEHGGVMVCCDGCSEWFHDSCVGLSPSAVDDLDDYYCLVCCE 256
            NT E L   YCICR    ++G +MVCCDGC +WFH  C GL       + +YYC+ C E
Sbjct:   31 NTGEEL---YCICR--RPDNGELMVCCDGCDQWFHFKCKGLDLKLDKLVSNYYCIFCDE 84          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig116.1323.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 13
Match NameE-valueIdentityDescription
D8LN51_ECTSI9.360e-3442.79Whsc1 protein n=1 Tax=Ectocarpus siliculosus TaxID... [more]
A0A6H5JSL4_9PHAE5.620e-2438.75Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
UPI001EE534B52.290e-742.11PHD finger protein ALFIN-LIKE 7-like n=1 Tax=Halio... [more]
A0A6J8B799_MYTCO4.400e-739.19CXXC1 n=1 Tax=Mytilus coruscus TaxID=42192 RepID=A... [more]
A0A6J8E9P9_MYTCO9.360e-750.00CXXC1 n=1 Tax=Mytilus coruscus TaxID=42192 RepID=A... [more]
A0A8B6DIH2_MYTGA1.410e-650.91COMPASS component SPP1 n=1 Tax=Mytilus galloprovin... [more]
A0A8B6HD80_MYTGA1.730e-650.91Nucleosome-remodeling factor subunit BPTF n=1 Tax=... [more]
A0A507CFN3_9FUNG2.540e-542.62Uncharacterized protein n=2 Tax=Synchytrium endobi... [more]
A0A485KNS8_9STRA2.570e-546.94Aste57867_9611 protein n=1 Tax=Aphanomyces stellat... [more]
A0A1E4TSM4_PACTA3.630e-547.46PHD-type domain-containing protein n=1 Tax=Pachyso... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001965Zinc finger, PHD-typeSMARTSM00249PHD_3coord: 207..255
e-value: 1.0E-7
score: 41.6
IPR019787Zinc finger, PHD-fingerPFAMPF00628PHDcoord: 207..256
e-value: 2.8E-8
score: 33.5
IPR019787Zinc finger, PHD-fingerPROSITEPS50016ZF_PHD_2coord: 205..257
score: 8.894
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 169..261
e-value: 1.9E-15
score: 58.7
IPR037869Spp1/CFP1PANTHERPTHR46174FAMILY NOT NAMEDcoord: 182..260
IPR019786Zinc finger, PHD-type, conserved sitePROSITEPS01359ZF_PHD_1coord: 208..254
IPR011011Zinc finger, FYVE/PHD-typeSUPERFAMILY57903FYVE/PHD zinc fingercoord: 196..263

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig116contigF-serratus_M_contig116:641026..646199 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig116.1323.1mRNA_F-serratus_M_contig116.1323.1Fucus serratus malemRNAF-serratus_M_contig116 640366..647187 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig116.1323.1 ID=prot_F-serratus_M_contig116.1323.1|Name=mRNA_F-serratus_M_contig116.1323.1|organism=Fucus serratus male|type=polypeptide|length=657bp
MEGRTLGFARGKGKDRSKSRRGPEYHHRTESLDPPLSLIGSPASDAKDVG
ATRSLEVLEAGTRGYACLFEAIGGAIQAVVNAEAKPFREARTELPTLKAA
SRWVAIETSWGYARALASELFRMKNNDAGQHSSIATSAALPMDMSDIAVP
RVTATEHLVNVNGDVAGVDGGKDRKNRASARPEDGERERLERKTANNNTE
EPLDARYCICRGGEGEHGGVMVCCDGCSEWFHDSCVGLSPSAVDDLDDYY
CLVCCESQPGKYGQYAHSWTTNVAIEAAVRRLTLKKTPKALAIGKTQTKN
RTPMFSTKAEGSSCATASCSNHATEVDEGGGSSVEGTDDAAVCSKTRLRD
MSSCAKDFPGAKRARAAAWISDFVERHHAELRMPWPIKPPPKASAEIQET
HETFFYQPLSDGGCVSNEGHDDGPHDEEDKEKTGDWKGNKMSRGSGQGAI
LPAFSALPSSTKEFLDLGLVTENADDERLPPSRVCPVRVNIWSEGDAGVR
DKHGSGGDSLSPFAMMLRNGDHNPYSDVQQTEQQQAEGGTSGTVSSSWIK
LPQCSPLGLAPYPTLHPVIDMNSYLASSSQVPINAAHMAHIPRMPVWSGG
AFSQIVASRYCVQGVNIQQDQLQSPVGVSTSAASAVAPTVMPSDNEASNA
PMPGMA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001965Znf_PHD
IPR019787Znf_PHD-finger
IPR013083Znf_RING/FYVE/PHD
IPR037869Spp1/CFP1
IPR019786Zinc_finger_PHD-type_CS
IPR011011Znf_FYVE_PHD