prot_F-serratus_M_contig1157.1294.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1157.1294.1
Unique Nameprot_F-serratus_M_contig1157.1294.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length392
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1157.1294.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003591Leucine-rich repeat, typical subtypeSMARTSM00369LRR_typ_2coord: 310..329
e-value: 73.0
score: 6.2
coord: 284..306
e-value: 7.0
score: 14.5
coord: 331..353
e-value: 44.0
score: 8.0
coord: 261..283
e-value: 16.0
score: 11.7
IPR001611Leucine-rich repeatPFAMPF13855LRR_8coord: 312..366
e-value: 2.5E-9
score: 36.8
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 262..283
score: 5.579
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 285..306
score: 7.096
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 219..383
e-value: 5.1E-23
score: 82.6
NoneNo IPR availablePANTHERPTHR24366:SF102LEUCINE RICH REPEAT CONTAINING 15coord: 255..372
NoneNo IPR availablePANTHERPTHR24366FAMILY NOT NAMEDcoord: 255..372
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 7..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 19..26
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..6
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 27..391
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..26
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..26
score: 0.702
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 235..374
NoneNo IPR availableTMHMMTMhelixcoord: 7..24

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1157contigF-serratus_M_contig1157:48239..54797 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1157.1294.1mRNA_F-serratus_M_contig1157.1294.1Fucus serratus malemRNAF-serratus_M_contig1157 47798..54806 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1157.1294.1 ID=prot_F-serratus_M_contig1157.1294.1|Name=mRNA_F-serratus_M_contig1157.1294.1|organism=Fucus serratus male|type=polypeptide|length=392bp
MKISSSTLVAVPLLGAFFAMMPFARAEWKTIEVEADETKFEISYEAGSDQ
PYRIVFTEDGVESVFTFEESGCVTTMEVDSEIYDIEDADDEDSVTVNLRS
STRRLHSKNHADGEGEGEDQHRFDSRRLYDCDDCEATWDVVCDEGVPCVC
NLRDIGAPLSAAAEHAVETLCEKMGNACSANGGEEACDGQCILSPTPTPT
PPPSGSDVNSCVDISVARTCEYRGPVDSPAPEDQELFLENCGLVDEDLDD
ISACFDKFGRSNIRYLFMTGNELTFLPEDIFSGANIEELWLSSNQLLSLP
AGLFESGVPVDLYIDNNQLKTLPEDIFVGRSRMSILSIQNNNLLALPEGI
FSGLTSLYRLRLTGNPDLECIPTNPADDENVTADAGILPCD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003591Leu-rich_rpt_typical-subtyp
IPR001611Leu-rich_rpt
IPR032675LRR_dom_sf