prot_F-serratus_M_contig1156.1290.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_F-serratus_M_contig1156.1290.1
Unique Name	prot_F-serratus_M_contig1156.1290.1
Type	polypeptide
Organism	Fucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length	124

Homology

[Close]

BLAST of mRNA_F-serratus_M_contig1156.1290.1 vs. uniprot
Match: D7FWI9_ECTSI (Histone H2A n=6 Tax=Ectocarpus TaxID=2879 RepID=D7FWI9_ECTSI)

HSP 1 Score: 207 bits (528), Expect = 2.290e-67
Identity = 107/121 (88.43%), Postives = 115/121 (95.04%), Query Frame = 0

Query:    1 MTGKGKGGRGKKAASRSSKAGLQFPVGRIGRFLKIGKYSQRVGAGSLVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKASK 121
            M+GKGKGGRGKK+ +RS+KAGLQFPVGR+GRFLK GKY+ RVGAG+ VYLAAVLEYLTAEVLELAGNAARDNKKARI+PRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK  K
Sbjct:    1 MSGKGKGGRGKKSTTRSAKAGLQFPVGRVGRFLKKGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKTVK 121

[Close]

BLAST of mRNA_F-serratus_M_contig1156.1290.1 vs. uniprot
Match: A0A6H5KG79_9PHAE (Histone H2A n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KG79_9PHAE)

HSP 1 Score: 207 bits (528), Expect = 3.510e-67
Identity = 108/122 (88.52%), Postives = 116/122 (95.08%), Query Frame = 0

Query:    1 MTGKGKGGRGKKAASRSSKAGLQFPVGRIGRFLKIGKYSQRVGAGSLVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKASKG 122
            M+GKGKGGRGKK+ S+SSKAGLQFPV RIGR+LK GKY+ RVGAG+ VYLAAVLEYLTAEVLELAGNAARDNKKARI+PRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK+S G
Sbjct:    1 MSGKGKGGRGKKSTSKSSKAGLQFPVARIGRYLKRGKYATRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKSSVG 122

[Close]

BLAST of mRNA_F-serratus_M_contig1156.1290.1 vs. uniprot
Match: D7G193_ECTSI (Histone H2A n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G193_ECTSI)

HSP 1 Score: 207 bits (528), Expect = 1.340e-66
Identity = 107/121 (88.43%), Postives = 115/121 (95.04%), Query Frame = 0

Query:    1 MTGKGKGGRGKKAASRSSKAGLQFPVGRIGRFLKIGKYSQRVGAGSLVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKASK 121
            M+GKGKGGRGKK+ +RS+KAGLQFPVGR+GRFLK GKY+ RVGAG+ VYLAAVLEYLTAEVLELAGNAARDNKKARI+PRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK  K
Sbjct:   46 MSGKGKGGRGKKSTTRSAKAGLQFPVGRVGRFLKKGKYASRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKTVK 166

[Close]

BLAST of mRNA_F-serratus_M_contig1156.1290.1 vs. uniprot
Match: D7FVQ5_ECTSI (Histone H2A n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVQ5_ECTSI)

HSP 1 Score: 207 bits (528), Expect = 1.800e-66
Identity = 108/122 (88.52%), Postives = 116/122 (95.08%), Query Frame = 0

Query:    1 MTGKGKGGRGKKAASRSSKAGLQFPVGRIGRFLKIGKYSQRVGAGSLVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKASKG 122
            M+GKGKGGRGKK+ S+SSKAGLQFPV RIGR+LK GKY+ RVGAG+ VYLAAVLEYLTAEVLELAGNAARDNKKARI+PRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK+S G
Sbjct:   52 MSGKGKGGRGKKSTSKSSKAGLQFPVARIGRYLKRGKYATRVGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKARIIPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKSSVG 173

[Close]

BLAST of mRNA_F-serratus_M_contig1156.1290.1 vs. uniprot
Match: D8LLP0_ECTSI (Histone H2A n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LLP0_ECTSI)

HSP 1 Score: 202 bits (513), Expect = 4.030e-65
Identity = 104/118 (88.14%), Postives = 111/118 (94.07%), Query Frame = 0

Query:    1 MTGKGKGGRGKKAASRSSKAGLQFPVGRIGRFLKIGKYSQRVGAGSLVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKK 118
            M+GKGKGGRGKK  SRS+KAGLQFPVGRIGRF+K GKYS RVG G+ VY+AAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELN+LLG+ TIASGGVLPNIHAVLLPKK
Sbjct:    1 MSGKGKGGRGKKITSRSAKAGLQFPVGRIGRFIKQGKYSSRVGGGAPVYMAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNRLLGDATIASGGVLPNIHAVLLPKK 118

[Close]

BLAST of mRNA_F-serratus_M_contig1156.1290.1 vs. uniprot
Match: A0A836CG77_9STRA (Histone H2A n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A836CG77_9STRA)

HSP 1 Score: 196 bits (498), Expect = 1.080e-62
Identity = 102/123 (82.93%), Postives = 113/123 (91.87%), Query Frame = 0

Query:    1 MTGKGKGGRG---KKAASRSSKAGLQFPVGRIGRFLKIGKYSQRVGAGSLVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKAS 120
            M GKGKGGRG   KK+ S+SSKAGLQFPV R+GRFLK+G+Y++RVGAG+ VYLAAVLEYL AE+LELAGNAARDNKK+RIVPRHIQLAVRNDEELNKLLG VTIASGGVLPNIHAVLLPKK +
Sbjct:    1 MAGKGKGGRGAEAKKSTSKSSKAGLQFPVARLGRFLKVGRYAERVGAGAPVYLAAVLEYLCAEILELAGNAARDNKKSRIVPRHIQLAVRNDEELNKLLGNVTIASGGVLPNIHAVLLPKKTA 123

[Close]

BLAST of mRNA_F-serratus_M_contig1156.1290.1 vs. uniprot
Match: C1EAM9_MICCC (Histone H2A n=7 Tax=cellular organisms TaxID=131567 RepID=C1EAM9_MICCC)

HSP 1 Score: 193 bits (491), Expect = 1.000e-61
Identity = 99/121 (81.82%), Postives = 111/121 (91.74%), Query Frame = 0

Query:    1 MTGKGKGGRGKKAASRSSKAGLQFPVGRIGRFLKIGKYSQRVGAGSLVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKASK 121
            M+G+GKG  GKKA SRS+KAGLQFPVGRI R+LK+GKY+ RVGAG+ VYLAAVLEYL AEVLELAGNA+RDNKK RIVPRHIQLA+RNDEEL+KLLG VTIASGGVLPNIH+VLLPKK+ K
Sbjct:    1 MSGRGKGKSGKKAVSRSAKAGLQFPVGRIARYLKVGKYATRVGAGAPVYLAAVLEYLAAEVLELAGNASRDNKKTRIVPRHIQLAIRNDEELSKLLGTVTIASGGVLPNIHSVLLPKKSKK 121

[Close]

BLAST of mRNA_F-serratus_M_contig1156.1290.1 vs. uniprot
Match: A0A061QUG5_9CHLO (Histone H2A n=4 Tax=core chlorophytes TaxID=2692248 RepID=A0A061QUG5_9CHLO)

HSP 1 Score: 192 bits (487), Expect = 6.010e-61
Identity = 99/119 (83.19%), Postives = 109/119 (91.60%), Query Frame = 0

Query:    3 GKGKGGRGKKAASRSSKAGLQFPVGRIGRFLKIGKYSQRVGAGSLVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKASK 121
            GKGK   GKKA SRS+KAGLQFPVGR+ R+LK GKY+ R+GAG+ VYLAAVLEYLTAEVLELAGNAARDNKK RIVPRHIQLAVRNDEEL+KLLG+VTIASGGVLPNIH+VLLPKK+ K
Sbjct:    5 GKGKSAAGKKAVSRSAKAGLQFPVGRVARYLKKGKYATRIGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKTRIVPRHIQLAVRNDEELSKLLGDVTIASGGVLPNIHSVLLPKKSDK 123

[Close]

BLAST of mRNA_F-serratus_M_contig1156.1290.1 vs. uniprot
Match: H2A_CHLRE (Histone H2A n=45 Tax=Chlamydomonadales TaxID=3042 RepID=H2A_CHLRE)

HSP 1 Score: 191 bits (486), Expect = 7.270e-61
Identity = 102/123 (82.93%), Postives = 110/123 (89.43%), Query Frame = 0

Query:    1 MTGKGKGGR-GKKAASRSSKAGLQFPVGRIGRFLKIGKYSQRVGAGSLVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKASKG 122
            M G+GKG   GKKA SRS+KAGLQFPVGRI R+LK GKY++R+GAG+ VYLAAVLEYLTAEVLELAGNAARDNKK RIVPRHIQLA+RNDEEL KLLGEVTIASGGVLPNIHAVLLPKK   G
Sbjct:    1 MAGRGKGKTSGKKAVSRSAKAGLQFPVGRIARYLKKGKYAERIGAGAPVYLAAVLEYLTAEVLELAGNAARDNKKNRIVPRHIQLAIRNDEELGKLLGEVTIASGGVLPNIHAVLLPKKTKGG 123

[Close]

BLAST of mRNA_F-serratus_M_contig1156.1290.1 vs. uniprot
Match: A0A7S0S3G4_9CHLO (Histone H2A n=2 Tax=Chlamydomonas leiostraca TaxID=1034604 RepID=A0A7S0S3G4_9CHLO)

HSP 1 Score: 191 bits (486), Expect = 9.720e-61
Identity = 98/116 (84.48%), Postives = 108/116 (93.10%), Query Frame = 0

Query:    6 KGGRGKKAASRSSKAGLQFPVGRIGRFLKIGKYSQRVGAGSLVYLAAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVTIASGGVLPNIHAVLLPKKASK 121
            KGG GKKA SRS+KAGLQFPVGRI R+LK GKY++R+GAG+ VYLAAVLEYL AEVLELAGNAARDNKK RIVPRHIQLA+RNDEEL+KLLGEVTIASGGVLPNIH+VLLPKK+ K
Sbjct:   16 KGGSGKKAQSRSAKAGLQFPVGRIARYLKKGKYAERIGAGAPVYLAAVLEYLCAEVLELAGNAARDNKKTRIVPRHIQLAIRNDEELSKLLGEVTIASGGVLPNIHSVLLPKKSKK 131

The following BLAST results are available for this feature:

BLAST of mRNA_F-serratus_M_contig1156.1290.1 vs. uniprot

BLAST of mRNA_F-serratus_M_contig1156.1290.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FWI9_ECTSI	2.290e-67	88.43	Histone H2A n=6 Tax=Ectocarpus TaxID=2879 RepID=D7...	[more]
A0A6H5KG79_9PHAE	3.510e-67	88.52	Histone H2A n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta...	[more]
D7G193_ECTSI	1.340e-66	88.43	Histone H2A n=1 Tax=Ectocarpus siliculosus TaxID=2...	[more]
D7FVQ5_ECTSI	1.800e-66	88.52	Histone H2A n=1 Tax=Ectocarpus siliculosus TaxID=2...	[more]
D8LLP0_ECTSI	4.030e-65	88.14	Histone H2A n=2 Tax=Ectocarpus TaxID=2879 RepID=D8...	[more]
A0A836CG77_9STRA	1.080e-62	82.93	Histone H2A n=2 Tax=Tribonema minus TaxID=303371 R...	[more]
C1EAM9_MICCC	1.000e-61	81.82	Histone H2A n=7 Tax=cellular organisms TaxID=13156...	[more]
A0A061QUG5_9CHLO	6.010e-61	83.19	Histone H2A n=4 Tax=core chlorophytes TaxID=269224...	[more]
H2A_CHLRE	7.270e-61	82.93	Histone H2A n=45 Tax=Chlamydomonadales TaxID=3042 ...	[more]
A0A7S0S3G4_9CHLO	9.720e-61	84.48	Histone H2A n=2 Tax=Chlamydomonas leiostraca TaxID...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002119	Histone H2A	PRINTS	PR00620	HISTONEH2A	coord: 41..56 score: 79.35 coord: 70..84 score: 74.98 coord: 56..69 score: 90.54 coord: 98..116 score: 76.04 coord: 12..34 score: 72.34
IPR002119	Histone H2A	SMART	SM00414	h2a4	coord: 3..121 e-value: 8.7E-75 score: 264.4
IPR032454	Histone H2A, C-terminal domain	PFAM	PF16211	Histone_H2A_C	coord: 90..122 e-value: 1.2E-19 score: 69.8
IPR009072	Histone-fold	GENE3D	1.10.20.10		coord: 2..123 e-value: 2.1E-59 score: 200.8
IPR009072	Histone-fold	SUPERFAMILY	47113	Histone-fold	coord: 3..121
IPR007125	Histone H2A/H2B/H3	PFAM	PF00125	Histone	coord: 11..87 e-value: 2.6E-14 score: 53.7
None	No IPR available	PANTHER	PTHR23430:SF251		coord: 5..119
None	No IPR available	PANTHER	PTHR23430	HISTONE H2A	coord: 5..119
IPR032458	Histone H2A conserved site	PROSITE	PS00046	HISTONE_H2A	coord: 20..26

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
F-serratus_M_contig1156	contig	F-serratus_M_contig1156:124513..124884 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Fucus serratus MALE	2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90	2022-09-16
OGS1.0 of Fucus serratus male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_F-serratus_M_contig1156.1290.1	mRNA_F-serratus_M_contig1156.1290.1	Fucus serratus male	mRNA	F-serratus_M_contig1156 124513..124884 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_F-serratus_M_contig1156.1290.1 ID=prot_F-serratus_M_contig1156.1290.1|Name=mRNA_F-serratus_M_contig1156.1290.1|organism=Fucus serratus male|type=polypeptide|length=124bp
MTGKGKGGRGKKAASRSSKAGLQFPVGRIGRFLKIGKYSQRVGAGSLVYL
AAVLEYLTAEVLELAGNAARDNKKARIVPRHIQLAVRNDEELNKLLGEVT
IASGGVLPNIHAVLLPKKASKGT*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR002119	Histone_H2A
IPR032454	Histone_H2A_C
IPR009072	Histone-fold
IPR007125	Histone_H2A/H2B/H3
IPR032458	Histone_H2A_CS