prot_F-serratus_M_contig115.1267.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig115.1267.1
Unique Nameprot_F-serratus_M_contig115.1267.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length226
Homology
BLAST of mRNA_F-serratus_M_contig115.1267.1 vs. uniprot
Match: A0A6H5KCG6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCG6_9PHAE)

HSP 1 Score: 184 bits (468), Expect = 1.040e-54
Identity = 100/215 (46.51%), Postives = 133/215 (61.86%), Query Frame = 0
Query:    6 YRPLVGSLMRLSVTTRPDIDNALRACARHSHNPSARHWKALQQIAAYVNFLKEIGLKFVLGSCLKL--TVFADADYAAAPNDRRPVSGVAVILGDTAIGWKSSTQKCVTTVACEAEYVALYDTSKEALFMRAVLVFLQPELTGMRVDVFGHNEGAKAIANNPSSASRSKHIDLKLHLIRGSVCAGDVRVLDVRTAEQHADVLIKPLWRKKFMLHR 218
            +R +VGSLM ++  TR DI NA+RA ARHSH P   HWKA Q+I  Y+     + LKF   S + +   V+ DAD+A+   DRR VSG  V +    + W S TQKCV+    EAEY+A+ D  KEALF+  +L FL+P +   ++DV   NEGA A+A NP S+SRSKHID++ H +R     G + V  V + EQHAD+L K L R  F +HR
Sbjct:   36 FREVVGSLMWIASQTRADISNAVRAVARHSHEPKKSHWKAAQKILNYLLETAHLTLKFKRDSSVDVGTLVYVDADFASKATDRRSVSGAMVFVAAMLVVWISRTQKCVSQSTSEAEYLAMGDGVKEALFVNGMLQFLRPSVKPRKIDVLEDNEGAIALAENPLSSSRSKHIDVRHHFLRNLTEEGVIEVTHVPSKEQHADILTKALPRDLFEVHR 250          
BLAST of mRNA_F-serratus_M_contig115.1267.1 vs. uniprot
Match: A0A6H5KBM6_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBM6_9PHAE)

HSP 1 Score: 183 bits (465), Expect = 2.150e-53
Identity = 99/215 (46.05%), Postives = 132/215 (61.40%), Query Frame = 0
Query:    6 YRPLVGSLMRLSVTTRPDIDNALRACARHSHNPSARHWKALQQIAAYVNFLKEIGLKFVLGSCLKLT--VFADADYAAAPNDRRPVSGVAVILGDTAIGWKSSTQKCVTTVACEAEYVALYDTSKEALFMRAVLVFLQPELTGMRVDVFGHNEGAKAIANNPSSASRSKHIDLKLHLIRGSVCAGDVRVLDVRTAEQHADVLIKPLWRKKFMLHR 218
            +R +VGSLM ++  TRPDI NALRA  RHSH P   HWKA Q+I  Y+     + LKF   + +  +  V+ DAD+A+  NDRR VSG  V++    + W S TQKCV+    EAEY A+ D  K+ALF+  +L FL+P     ++DV   NE A A+A NP S+SRSKHID++ H +R     G + V  V + EQHAD+L K L R  F +HR
Sbjct:  107 FREVVGSLMWIANQTRPDISNALRAVVRHSHEPKKSHWKAAQKILNYLLETAHLTLKFKPDNSVDASTLVYVDADFASKANDRRSVSGAIVLVASMPVVWISKTQKCVSQSISEAEYFAMGDGVKKALFVNGMLQFLRPSANPRKIDVLEDNEEAIALAENPLSSSRSKHIDVRHHFLRNLTEEGVIEVTHVPSEEQHADILTKALPRDLFEVHR 321          
BLAST of mRNA_F-serratus_M_contig115.1267.1 vs. uniprot
Match: A0A6H5K274_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K274_9PHAE)

HSP 1 Score: 192 bits (487), Expect = 2.960e-53
Identity = 101/223 (45.29%), Postives = 141/223 (63.23%), Query Frame = 0
Query:    2 EFPLYRPLVGSLMRLSVTTRPDIDNALRACARHSHNPSARHWKALQQIAAYVNFLKEIGLKFVLGSCLKLTVFADADYAAAPNDRRPVSGVAVILGDTAIGWKSSTQKCVTTVACEAEYVALYDTSKEALFMRAVLVFLQPELTGMRVDVFGHNEGAKAIANNPSSASRSKHIDLKLHLIRGSVCAGDVRVLDVRTAEQHADVLIKPLWRKKFMLHRAALMNL 224
            E+P+ R  +GS+M +S  +RPD+  A+RA ARH+H P+ RHW A+Q+I  Y+   +++G+ +  GS L L V+ DA YA    DRR VSG+A  +G T +   S TQ  V+  + EAEY+A  +  KEALF+RAVL+F+ PE  G  + V   N+GA A+  NP S+ R+ HID++ H IRG   +GD+ V  V T EQHAD+L K L +     HR  LMNL
Sbjct:  535 EWPV-REAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQRGSGLGLAVYVDASYADT-EDRRSVSGLATTVGGTVVSHGSKTQSIVSLSSMEAEYIAAGEGVKEALFVRAVLLFVAPETRGSSIQVLEDNQGAMALVQNPLSSGRTTHIDVRFHFIRGLFGSGDISVKFVPTTEQHADLLTKALRKASLQYHRRKLMNL 755          
BLAST of mRNA_F-serratus_M_contig115.1267.1 vs. uniprot
Match: A0A6H5J8M4_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8M4_9PHAE)

HSP 1 Score: 179 bits (453), Expect = 1.110e-52
Identity = 96/216 (44.44%), Postives = 132/216 (61.11%), Query Frame = 0
Query:    6 YRPLVGSLMRLSVTTRPDIDNALRACARHSHNPSARHWKALQQIAAYVNFLKEIGLKFVLGSCLK---LTVFADADYAAAPNDRRPVSGVAVILGDTAIGWKSSTQKCVTTVACEAEYVALYDTSKEALFMRAVLVFLQPELTGMRVDVFGHNEGAKAIANNPSSASRSKHIDLKLHLIRGSVCAGDVRVLDVRTAEQHADVLIKPLWRKKFMLHR 218
            +R +VG LM ++  TRPDI NA+RA ARHSH P  R WKA Q+I  Y+     + LK+   S +      V+ DAD+A+   DRR VSG  VI+    + W S TQKCV+    EAEY+A+ D  KE+LF+  +L FL+P +   ++DV   NEGA A+A NP S+ RSKHID++ H +R     G + +  V + +QHAD+L K L R  F +HR
Sbjct:   17 FREVVGCLMWVANGTRPDISNAVRAVARHSHEPKKRDWKAAQKILNYLLATAHLTLKYKRDSTVDDVGTLVYVDADFASKATDRRSVSGALVIVAACLVAWLSWTQKCVSQSTSEAEYLAMGDGVKESLFVNGMLQFLRPSVEPRKIDVLEDNEGAIALAENPLSSCRSKHIDVRHHFLRNLTEEGVIEITHVPSEKQHADILTKALPRSIFEVHR 232          
BLAST of mRNA_F-serratus_M_contig115.1267.1 vs. uniprot
Match: A0A6H5JW47_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW47_9PHAE)

HSP 1 Score: 178 bits (451), Expect = 1.860e-52
Identity = 96/222 (43.24%), Postives = 131/222 (59.01%), Query Frame = 0
Query:    6 YRPLVGSLMRLSVTTRPDIDNALRACARHSHNPSARHWKALQQIAAYVNFLKEIGLKFVLGSCLKL--TVFADADYAAAPNDRRPVSGVAVILGDTAIGWKSSTQKCVTTVACEAEYVALYDTSKEALFMRAVLVFLQPELTGMRVDVFGHNEGAKAIANNPSSASRSKHIDLKLHLIRGSVCAGDVRVLDVRTAEQHADVLIKPLWRKKFMLHRAALMNLS 225
            +R +VG LM ++  TRPDI NA+RA ARHSH P   HWKA Q+I  Y+     + L F   S + +   V+  AD+A+   DRR VSG  V +    + W S TQKCV     EAEY+A+ D  KEALF   +L FL+P      + V   NEGA A+A+NP S+ R KHID++ H +R     G +++  V + EQHAD+L K L R+ F +HR  ++ LS
Sbjct:   11 FREVVGCLMWIACQTRPDISNAVRAVARHSHEPKLSHWKAAQKILNYLLGTAHLSLNFKRDSSVDVGTLVYVAADFASKATDRRSVSGALVFVAGMLVVWTSRTQKCVAQSTSEAEYLAMGDGVKEALFEDGMLQFLRPSEKSREIKVLEDNEGAIALADNPLSSGRRKHIDVRHHFLRSLTEEGRIKISHVSSKEQHADILTKALPRELFEVHRNFVLGLS 232          
BLAST of mRNA_F-serratus_M_contig115.1267.1 vs. uniprot
Match: A0A6H5KKK1_9PHAE (Integrase catalytic domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKK1_9PHAE)

HSP 1 Score: 189 bits (480), Expect = 9.710e-52
Identity = 101/215 (46.98%), Postives = 135/215 (62.79%), Query Frame = 0
Query:    6 YRPLVGSLMRLSVTTRPDIDNALRACARHSHNPSARHWKALQQIAAYVNFLKEIGLKFVLGSCLKLT--VFADADYAAAPNDRRPVSGVAVILGDTAIGWKSSTQKCVTTVACEAEYVALYDTSKEALFMRAVLVFLQPELTGMRVDVFGHNEGAKAIANNPSSASRSKHIDLKLHLIRGSVCAGDVRVLDVRTAEQHADVLIKPLWRKKFMLHR 218
            +R +VGSLM ++  TRPDI NA+RA ARHSH P   HWKA Q+I  Y+     + LKF   + +  +  V+ DAD+A+  NDRR VSG  V++    + W S TQKCV+    EAEY+A+ D  KEALF+  +L FL+P     ++DV   NEGA A+A NP S+SRSKHID++ H +R     G + V  V + EQHAD+L K L R  F +HR
Sbjct:  738 FREVVGSLMWIANQTRPDISNAVRAVARHSHEPKKSHWKAAQKILNYLLETAHLTLKFKPDNSVDASTLVYVDADFASKANDRRSVSGAIVLVASMPVVWISKTQKCVSQSTSEAEYLAMGDGVKEALFVNGMLQFLRPSAKPRKIDVLEDNEGAIALAENPLSSSRSKHIDVRHHFLRNLTEEGVIEVTHVPSEEQHADILTKALPRDLFEVHR 952          
BLAST of mRNA_F-serratus_M_contig115.1267.1 vs. uniprot
Match: A0A6H5JRL9_9PHAE (Integrase catalytic domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRL9_9PHAE)

HSP 1 Score: 189 bits (480), Expect = 1.330e-51
Identity = 101/215 (46.98%), Postives = 135/215 (62.79%), Query Frame = 0
Query:    6 YRPLVGSLMRLSVTTRPDIDNALRACARHSHNPSARHWKALQQIAAYVNFLKEIGLKFVLGSCLKLT--VFADADYAAAPNDRRPVSGVAVILGDTAIGWKSSTQKCVTTVACEAEYVALYDTSKEALFMRAVLVFLQPELTGMRVDVFGHNEGAKAIANNPSSASRSKHIDLKLHLIRGSVCAGDVRVLDVRTAEQHADVLIKPLWRKKFMLHR 218
            +R +VGSLM ++  TRPDI NA+RA ARHSH P   HWKA Q+I  Y+     + LKF   + +  +  V+ DAD+A+  NDRR VSG  V++    + W S TQKCV+    EAEY+A+ D  KEALF+  +L FL+P     ++DV   NEGA A+A NP S+SRSKHID++ H +R     G + V  V + EQHAD+L K L R  F +HR
Sbjct: 1005 FREVVGSLMWIANQTRPDISNAVRAVARHSHEPKKSHWKAAQKILNYLLETAHLTLKFKPDNSVDASTLVYVDADFASKANDRRSVSGAIVLVASMPVVWISKTQKCVSQSTSEAEYLAMGDGVKEALFVNGMLQFLRPSAKPRKIDVLEDNEGAIALAENPLSSSRSKHIDVRHHFLRNLTEEGVIEVTHVPSEEQHADILTKALPRDLFEVHR 1219          
BLAST of mRNA_F-serratus_M_contig115.1267.1 vs. uniprot
Match: A0A6H5JTP8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTP8_9PHAE)

HSP 1 Score: 176 bits (445), Expect = 7.870e-51
Identity = 93/215 (43.26%), Postives = 130/215 (60.47%), Query Frame = 0
Query:    6 YRPLVGSLMRLSVTTRPDIDNALRACARHSHNPSARHWKALQQIAAYVNFLKEIGLKFVLGSCLKL--TVFADADYAAAPNDRRPVSGVAVILGDTAIGWKSSTQKCVTTVACEAEYVALYDTSKEALFMRAVLVFLQPELTGMRVDVFGHNEGAKAIANNPSSASRSKHIDLKLHLIRGSVCAGDVRVLDVRTAEQHADVLIKPLWRKKFMLHR 218
            +R +VG LM ++  TRP+  NA+R  ARHSH P    WKA Q+I +Y+     + LK+   + + +   V+ DAD+A+   DRR VSG  V +    + W + TQKCV+    EAEY+A+ D  KEALF+  +L FL+P     ++DVF  NEGA A+A NP S+SRSKHID++ H +R     G + V  V +  QHAD+L K L R  F +HR
Sbjct:   68 FREVVGCLMWIANNTRPETSNAVRTVARHSHEPKKSDWKAAQKILSYLKETAHLTLKYKQDTTVDVGTLVYVDADFASKATDRRSVSGALVRVAGCLVSWFAWTQKCVSLSTSEAEYIAMGDGVKEALFVNGMLQFLRPSAKPRKIDVFEDNEGAIALAENPLSSSRSKHIDVRHHFLRNLTEEGVIEVTHVPSKVQHADILTKALPRNLFEVHR 282          
BLAST of mRNA_F-serratus_M_contig115.1267.1 vs. uniprot
Match: A0A6H5JRE7_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRE7_9PHAE)

HSP 1 Score: 178 bits (452), Expect = 8.090e-51
Identity = 94/215 (43.72%), Postives = 130/215 (60.47%), Query Frame = 0
Query:    6 YRPLVGSLMRLSVTTRPDIDNALRACARHSHNPSARHWKALQQIAAYVNFLKEIGLKFVLGSCLKL--TVFADADYAAAPNDRRPVSGVAVILGDTAIGWKSSTQKCVTTVACEAEYVALYDTSKEALFMRAVLVFLQPELTGMRVDVFGHNEGAKAIANNPSSASRSKHIDLKLHLIRGSVCAGDVRVLDVRTAEQHADVLIKPLWRKKFMLHR 218
            +R +VG LM ++  TRP+  NA+R  ARHSH P    WKA Q+I +Y+     + LK+   + + +   V+ DAD+A+   DRR VSG  V++    + W S TQKCV+    EAEY+A+ D  KEA F+  +L FL+P     ++DVF  NEGA A+A NP S+SRSKHID++ H +R     G + V  V + EQHAD+L K L R  F  HR
Sbjct:  163 FREVVGCLMWIANNTRPETSNAVRTVARHSHEPKKSDWKAAQKILSYLKETAHLTLKYKQDTTVDVGTLVYVDADFASKATDRRSVSGALVLVVGCLVSWFSWTQKCVSLSTSEAEYIAMGDGVKEAFFVNGMLQFLRPSAKPRKIDVFEDNEGAIALAENPLSSSRSKHIDVRHHFLRNLTEEGVIEVTHVPSKEQHADILTKALPRNLFEFHR 377          
BLAST of mRNA_F-serratus_M_contig115.1267.1 vs. uniprot
Match: A0A6H5KZH7_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZH7_9PHAE)

HSP 1 Score: 184 bits (468), Expect = 5.500e-50
Identity = 100/215 (46.51%), Postives = 133/215 (61.86%), Query Frame = 0
Query:    6 YRPLVGSLMRLSVTTRPDIDNALRACARHSHNPSARHWKALQQIAAYVNFLKEIGLKFVLGSCLKL--TVFADADYAAAPNDRRPVSGVAVILGDTAIGWKSSTQKCVTTVACEAEYVALYDTSKEALFMRAVLVFLQPELTGMRVDVFGHNEGAKAIANNPSSASRSKHIDLKLHLIRGSVCAGDVRVLDVRTAEQHADVLIKPLWRKKFMLHR 218
            +R +VGSLM ++  TR DI NA+RA ARHSH P   HWKA Q+I  Y+     + LKF   S + +   V+ DAD+A+   DRR VSG  V +    + W S TQKCV+    EAEY+A+ D  KEALF+  +L FL+P +   ++DV   NEGA A+A NP S+SRSKHID++ H +R     G + V  V + EQHAD+L K L R  F +HR
Sbjct: 1179 FREVVGSLMWIASQTRADISNAVRAVARHSHEPKKSHWKAAQKILNYLLETAHLTLKFKRDSSVDVGTLVYVDADFASKATDRRSVSGAMVFVAAMLVVWISRTQKCVSQSTSEAEYLAMGDGVKEALFVNGMLQFLRPSVKPRKIDVLEDNEGAIALAENPLSSSRSKHIDVRHHFLRNLTEEGVIEVTHVPSKEQHADILTKALPRDLFEVHR 1393          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig115.1267.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KCG6_9PHAE1.040e-5446.51Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KBM6_9PHAE2.150e-5346.05Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5K274_9PHAE2.960e-5345.29Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5J8M4_9PHAE1.110e-5244.44Uncharacterized protein n=3 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JW47_9PHAE1.860e-5243.24Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KKK1_9PHAE9.710e-5246.98Integrase catalytic domain-containing protein n=2 ... [more]
A0A6H5JRL9_9PHAE1.330e-5146.98Integrase catalytic domain-containing protein n=2 ... [more]
A0A6H5JTP8_9PHAE7.870e-5143.26Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JRE7_9PHAE8.090e-5143.72Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KZH7_9PHAE5.500e-5046.51Uncharacterized protein n=3 Tax=Ectocarpus sp. CCA... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 6..214
NoneNo IPR availablePANTHERPTHR11439:SF275coord: 6..214

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig115contigF-serratus_M_contig115:772482..773159 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig115.1267.1mRNA_F-serratus_M_contig115.1267.1Fucus serratus malemRNAF-serratus_M_contig115 772482..773159 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig115.1267.1 ID=prot_F-serratus_M_contig115.1267.1|Name=mRNA_F-serratus_M_contig115.1267.1|organism=Fucus serratus male|type=polypeptide|length=226bp
DEFPLYRPLVGSLMRLSVTTRPDIDNALRACARHSHNPSARHWKALQQIA
AYVNFLKEIGLKFVLGSCLKLTVFADADYAAAPNDRRPVSGVAVILGDTA
IGWKSSTQKCVTTVACEAEYVALYDTSKEALFMRAVLVFLQPELTGMRVD
VFGHNEGAKAIANNPSSASRSKHIDLKLHLIRGSVCAGDVRVLDVRTAEQ
HADVLIKPLWRKKFMLHRAALMNLS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039537Retrotran_Ty1/copia-like