prot_F-serratus_M_contig114.1222.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_F-serratus_M_contig114.1222.1
Unique Name	prot_F-serratus_M_contig114.1222.1
Type	polypeptide
Organism	Fucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length	169

Homology

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BLAST of mRNA_F-serratus_M_contig114.1222.1 vs. uniprot
Match: A0A6H5JWV5_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JWV5_9PHAE)

HSP 1 Score: 257 bits (657), Expect = 1.470e-85
Identity = 125/169 (73.96%), Postives = 141/169 (83.43%), Query Frame = 0

Query:    1 MKVNVPWSRLRQNPRDVREKAAAGYDERNEPPRL-KEAERKVTWDVTDFGRRMAFGGIVGGITGIAFGAMDGHRSIRDDKIGRFPTMALKTKEFMRLTALSGTIFTGFFCAYQGAKYGATLVRKEDDFWNVLIASAISFAPMVPFPVMRNRYPYAAVLVGMDTLNNHVL 168
            M VNVPWS LR NPRD RE+AAA +    + P L K+ E ++ WDVTDFG+RMAFGGIVGG+TGI FGAMDGHR+IRDD +G+FPT ALKTKEF RLTALSGTIFTGFFC YQG KYGA L RKEDDFWNVLIASA SFAPM+  P MR+RYPYAA+L+ MDTLNNH+L
Sbjct:    1 MTVNVPWSTLRPNPRDQRERAAAEFPGGGKAPPLDKDGEPEIAWDVTDFGKRMAFGGIVGGVTGITFGAMDGHRAIRDDSMGKFPTTALKTKEFTRLTALSGTIFTGFFCTYQGMKYGAKLARKEDDFWNVLIASAGSFAPMLVVPAMRSRYPYAAILIAMDTLNNHIL 169

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BLAST of mRNA_F-serratus_M_contig114.1222.1 vs. uniprot
Match: A0A835YQU0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQU0_9STRA)

HSP 1 Score: 152 bits (385), Expect = 3.180e-44
Identity = 83/167 (49.70%), Postives = 108/167 (64.67%), Query Frame = 0

Query:    3 VNVPWSRLRQNPRDVREKAA-AGYDERNEPPRLKEAERKVTWDVTDFGRRMAFGGIVGGITGIAFGAMDGHRSIRDDKIGRFPTMALKTKEFMRLTALSGTIFTGFFCAYQGAKYGATLVRKEDDFWNVLIASAISFAPMVPFPVMRNRYPYAAVLVGMDTLNNHVL 168
            VNVPW  LR NPR  R++ + A   + ++P    +A     +D+    R++ FG   GG+TGI FG MD HR I   K G+F T+A K KE  R+TA +GT+F G+F AYQG KYG    R ED F+NV +A+AIS AP+VPFP +R R PY A LV +DTLN+HVL
Sbjct:    6 VNVPWRELRHNPRTERDRLSEAELSDESKPE--SDATFMDRFDMGMMNRKLIFGVACGGVTGIMFGLMDSHRVI--SKTGQFFTLAAKVKETTRMTAFTGTVFGGYFAAYQGIKYGIQAYRGEDTFFNVFMATAISIAPVVPFPALRARLPYMAFLVAIDTLNSHVL 168

[Close]

BLAST of mRNA_F-serratus_M_contig114.1222.1 vs. uniprot
Match: A0A7S2GUV3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2GUV3_9STRA)

HSP 1 Score: 70.5 bits (171), Expect = 1.690e-11
Identity = 42/119 (35.29%), Postives = 62/119 (52.10%), Query Frame = 0

Query:   41 VTWDVTDFGRRMAFGGIVGGITGIAFGAMDGHRSIRD-DKIGRFPTMALKTKEFMRLTALSGTIFTGFFCAYQGAKYGATLVRKEDDFWNVLIASAISFAPMVPFPVMRNRYPYAAVLV 158
            V +   D  R + FG  +G ITG+AFG MDG RS+ + + +    + A K K   + T  SG +F  FF ++   KYG  ++    D   V IA A++   +V  P  R   PYAA+L+
Sbjct:  144 VPYSTPDLFRNLTFGVTLGSITGMAFGFMDGMRSVGESNSVLANASNAAKGKYLFQGTVRSGMVFGAFFGSFHAIKYGIRVMSDPGDAAEVSIAGAVTLGGLVVKPATRASLPYAAMLI 262

The following BLAST results are available for this feature:

BLAST of mRNA_F-serratus_M_contig114.1222.1 vs. uniprot

BLAST of mRNA_F-serratus_M_contig114.1222.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 3


Match Name	E-value	Identity	Description
A0A6H5JWV5_9PHAE	1.470e-85	73.96	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]
A0A835YQU0_9STRA	3.180e-44	49.70	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A7S2GUV3_9STRA	1.690e-11	35.29	Hypothetical protein (Fragment) n=1 Tax=Helicothec...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 115..125
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 73..92
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..51
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 93..114
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 145..168
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 126..144
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 52..72
None	No IPR available	TMHMM	TMhelix		coord: 92..114
None	No IPR available	TMHMM	TMhelix		coord: 52..69
None	No IPR available	TMHMM	TMhelix		coord: 127..146

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
F-serratus_M_contig114	contig	F-serratus_M_contig114:665545..667112 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Fucus serratus MALE	2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90	2022-09-16
OGS1.0 of Fucus serratus male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_F-serratus_M_contig114.1222.1	mRNA_F-serratus_M_contig114.1222.1	Fucus serratus male	mRNA	F-serratus_M_contig114 664900..667172 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_F-serratus_M_contig114.1222.1 ID=prot_F-serratus_M_contig114.1222.1|Name=mRNA_F-serratus_M_contig114.1222.1|organism=Fucus serratus male|type=polypeptide|length=169bp
MKVNVPWSRLRQNPRDVREKAAAGYDERNEPPRLKEAERKVTWDVTDFGR
RMAFGGIVGGITGIAFGAMDGHRSIRDDKIGRFPTMALKTKEFMRLTALS
GTIFTGFFCAYQGAKYGATLVRKEDDFWNVLIASAISFAPMVPFPVMRNR
YPYAAVLVGMDTLNNHVL*