prot_F-serratus_M_contig1139.1210.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1139.1210.1
Unique Nameprot_F-serratus_M_contig1139.1210.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length497
Homology
BLAST of mRNA_F-serratus_M_contig1139.1210.1 vs. uniprot
Match: A0A6H5KN22_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KN22_9PHAE)

HSP 1 Score: 171 bits (433), Expect = 1.410e-43
Identity = 160/537 (29.80%), Postives = 241/537 (44.88%), Query Frame = 0
Query:    4 SSLGGNSYVVIFVNDCNRFKVVKFAKKKSDTTAALSSLV----ADYITPQKLSIKCIRTDNGGE-FEGEFQRELDRRGITHEHTPPDTPQYNGVAERALGLLREKTI---ILMEELNDVINVPR-EKLWAQAMLFSCDVTNKSVATSTDEGKSPHELWFGKFSTADHLRP---LGAVGCARQSVREHKMAPKGEKCVFMGISQNFPTGTVSVLLVRSRNIVERQAVQWIDGSKKTRGDDTGSDDRGMKSAGGERITEEENGVE--DLLACDDGGQMAMQATIDKPEPTNRRQAMESQEWDEWWKAEETEMLGMVENCVYKQQVARPKDELVIGTKMIYKRKFGQDGKVEKYKCRLVAQGFWQVEGVHYTEKHTPTLSTASIRMLLAMAVTKDGELRHFYAEQEFLKADIGEEIDIEIPEELQEFPGAVGRLNKAIYG--------------------FEK---------------------------------EEMGKFPYREAVEALMWTATMTRPDIVCAVRAVTRFCENPWQAH 473
            +S+GG  Y ++  +D  R   + F K KSD   A  S +    AD I P  + I  +R+DNGGE F G+F    +   I  E TP  +PQYNGVAER LGL+    +   I  + L   + + + ++LWA+AM  +C+  N +  +   + KSP+E+W G+   A H RP   L    C  Q  R  K+ P+GE C ++G S++ P     VL  R   I E + V W         +   S    ++ +       EE G E  D +  +    +A++    +  P    +   S E++           G++    +   V       VI  + IYK K  +  K  K K RLVA+GF Q  GV Y E  +PT + ASIR+L+A+A     E+ HF  EQ F+++++  E+ +++P   +   G V R++K++YG                    FE+                                 E  G  P+RE V +LMW A  TRPDI  AVR V R    P ++H
Sbjct:   27 ASVGGKHYPMVVKDDFTRRTWLCFLKNKSDAGRAFRSFLVGVRADGI-PSLVEI--VRSDNGGECFGGDFTSVCNELLIKQEFTPAYSPQYNGVAERGLGLIEAAAMAARIQAKVLFGHVQLSKTDRLWAEAMHLACEAINHTACSPNSDSKSPYEMWHGE---ASHARPYPFLKPAYCRWQ--RPSKLLPRGEACCYVGPSRDHPRDCHRVL-TRVGTIQETRNVTW---------EALPSQLPPLQPSLLLIEVAEEGGEERDDDVEVESQNLVAIKKPAGRSTPRFGTRPRLSAEFE-----------GLLRAGTFALAVKALIGCNVIDARWIYKWKADEISKTVKAKARLVAKGFKQKHGVDYLETFSPTANAASIRLLVALACKCSLEVLHFDIEQVFVQSELDHEVFMKLPPGCELMSGKVVRVDKSLYGLRQACRTFHKRLVLDLKRIGFEQSLSDPLCSSSMMGDEVMGMIPVHVDDIRSVMDDEAAGDVPFREVVGSLMWIANQTRPDISNAVRVVARRSHEPNKSH 534          
BLAST of mRNA_F-serratus_M_contig1139.1210.1 vs. uniprot
Match: UPI001EFFA561 (DDE-type integrase/transposase/recombinase n=1 Tax=Corynebacterium parakroppenstedtii TaxID=2828363 RepID=UPI001EFFA561)

HSP 1 Score: 164 bits (416), Expect = 7.240e-40
Identity = 137/492 (27.85%), Postives = 215/492 (43.70%), Query Frame = 0
Query:    1 MKHSSLGGNSYVVIFVNDCNRFKVVKFAKKKSDTTAALSSLVADYITPQKLSIKCIRTDNGGEFEGEFQRELDRRGITHEHTPPDTPQYNGVAERALGLLREKTIILMEELNDVINVPREKLWAQAMLFSCDVTNKSVATSTDEGKSPHELWFGKFSTADHLRPLGAVGCARQSVREH-KMAPKGEKCVFMGIS-QNFPT---GTVSVLLVRSRNIV--ERQAVQWIDGSKKTRGDDT------------------GSDDRG------------------------------------MKSAGGERITEEENGVEDLLACDDGGQMAMQATIDKPEPTNRRQAMESQEWDEWWKAEETEMLGMVENCVYKQQVARPKDELVIGTKMIYKRKFGQDGKVEKYKCRLVAQGFWQVEGVHYTEKHTPTLSTASIRMLLAMAVTKDGELRHFYAEQEFLKADIGEEIDIEIPE--ELQEFPGAVGRLNKAIYGFEK 429
            MK  +LGG  Y V F++DC+R   V   K K           A         +KCIRTDNGGE+ G F      +GI H+ TPP TPQ NG+AER    L E+   L+ E      +P    W +A+L +  V N S   +  +G  P+++W+GK  + DHLR  G          E  K+  K  +C+F+G     F       +   LVRSR+IV  E Q ++ I+ ++K     +                  G DDR                                     ++ +  +R+        + +   DGG           EP   ++AME +   +W +A + EM  + EN  Y + V  PK    +  K ++K K  +  +  +YK RLV +GF Q +G+ + E  +P +  +SIR +L +A + + E+     +  FL  D+ EEI +E PE  +++     V +L K++YG ++
Sbjct:  256 MKTKTLGGALYFVTFIDDCSRKLWVYVLKTKDQVLGVFKQFQASVERETGKKLKCIRTDNGGEYCGPFDEYCKHQGIRHQKTPPKTPQLNGLAERMNRTLMERVRCLLSEAK----LPNS-FWGEALLTAAHVINLSPTVAL-QGDVPNKVWYGKDVSYDHLRVFGCKAFVHVPKDERSKLDAKTRQCIFVGYGLDEFGYRLYDPIEKKLVRSRDIVFMENQTIEDIEKAEKLESSSSDGVVHIDEVPHASVHDVGGLDDRDEAQDHVQDQHVDIDNNNDGVINDPPAHEVVDEPNIPLRRSTRQRVPSSRYSSNEYMLLTDGG-----------EPECYKEAMEDEHRGQWIEAMQDEMKSLHENHTY-ELVKLPKGMKALKNKWVFKVKIEEHTQKPRYKARLVVKGFGQRKGIDFDEIFSPVVKMSSIRTVLGLAASLNLEIEQMDVKTAFLHGDLEEEIYMEQPEGFKVKGKENFVCKLKKSLYGLKQ 729          
BLAST of mRNA_F-serratus_M_contig1139.1210.1 vs. uniprot
Match: A0A8J6D8V3_9ROSI (Uncharacterized protein n=1 Tax=Gossypium anomalum TaxID=47600 RepID=A0A8J6D8V3_9ROSI)

HSP 1 Score: 164 bits (416), Expect = 9.300e-40
Identity = 141/480 (29.38%), Postives = 216/480 (45.00%), Query Frame = 0
Query:    1 MKHSSLGGNSYVVIFVNDCNRFKVVKFAKKKSDTTAALSSLVADYITPQKLSIKCIRTDNGGEFEGEFQRELDRRGITHEHTPPDTPQYNGVAERALGLLREKTIILMEELNDVINVPREKLWAQAMLFSCDVTNKSVATSTDEGKSPHELWFGKFSTADHLRPLGAVGCARQSVREH-KMAPKGEKCVFMGISQNFPTG-----TVSVLLVRSRNIV--ERQAVQWIDGSKKTRGDDTGS------------------DDRGMKSAGGERITEEENGVEDLLACDDGGQMAMQAT-----------------------IDKPEPTNRRQAMESQEWDEWWKAEETEMLGMVENCVYKQQVARPKDELVIGTKMIYKRKFGQDGKVEKYKCRLVAQGFWQVEGVHYTEKHTPTLSTASIRMLLAMAVTKDGELRHFYAEQEFLKADIGEEIDIEIPEE--LQEFPGAVGRLNKAIYGFEK 429
            +K  S GG  Y V F++DC+R   V   K K+          A      +  +KCIRTDNGGE+ G F     R+GI H+ TPP TPQ NG+AER    L E+   L+ +      +PR   WA+A+     V N S +    +G  P  +WFGK  + DHLR  G          E  K+  K  +C+F+G   +   G      V   LVRSR++V  E Q +  ID ++K    D+G                   D  G  S   + I + +  + D +       +A  A                         D  EP    +AM+S+  D+W +A + E+  + EN  + + V  P+ +  +  + +Y+ K  +     +YK RLV +G+ Q +GV + E  +P +  +SIR +L++A   D E+     +  FL  D+ EE+ +E PE   LQ     V RL K++YG ++
Sbjct: 1241 IKVRSHGGALYFVTFIDDCSRKLWVYTLKSKNQVFEVFKQFQASVERETRKKLKCIRTDNGGEYTGLFHEYCLRQGIRHQRTPPKTPQLNGLAERMNRTLIERVRCLLSDAK----LPRS-FWAEALNTVAHVINLSPSVPL-QGDVPDRVWFGKDVSYDHLRVFGCKAFVHVPKDERSKLDAKTRQCIFIGYGLDGEFGYRLYDPVQKKLVRSRDVVFIEDQTIDDIDKTEKVDSQDSGDLIDVNPAPLDSSPDPIQDDVHGDVSDDHQDIGDFDTPMNDAVNDQQQEPIAPPAVPLRRSSRDRRSSVRYSSDEYVLLTDGGEPECYEEAMKSECKDQWVEAMKDELQSLHENHTF-ELVKLPEGKRALKNRWVYRLKQEEKSSSLRYKARLVVKGYAQKKGVDFEEIFSPVVKMSSIRTILSLAACYDLEVEQMDVKTAFLHGDLEEELYMEQPEGFVLQGKEDYVCRLKKSLYGLKQ 1713          
BLAST of mRNA_F-serratus_M_contig1139.1210.1 vs. uniprot
Match: A0A8J6CG45_9ROSI (Integrase catalytic domain-containing protein n=1 Tax=Gossypium anomalum TaxID=47600 RepID=A0A8J6CG45_9ROSI)

HSP 1 Score: 160 bits (405), Expect = 1.020e-39
Identity = 133/447 (29.75%), Postives = 204/447 (45.64%), Query Frame = 0
Query:    1 MKHSSLGGNSYVVIFVNDCNRFKVVKFAKKKSDTTAALSSLVADYITPQKLSIKCIRTDNGGEFEGEFQRELDRRGITHEHTPPDTPQYNGVAERALGLLREKTIILMEELNDVINVPREKLWAQAMLFSCDVTNKSVATSTDEGKSPHELWFGKFSTADHLRPLGAVGCARQSVREH-KMAPKGEKCVFMGISQNFPTG-----TVSVLLVRSRNIV--ERQAVQWIDGSKKTRGDDTGS------------------DDRGMKSAGGERITEEENGVEDLLACDDGGQMAMQAT-------------IDKPEPTNRRQAMESQEWDEWWKAEETEMLGMVENCVYKQQVARPKDELVIGTKMIYKRKFGQDGKVEKYKCRLVAQGFWQVEGVHYTEKHTPTLSTASIRMLLAMAVTKDGELRHFYAEQEFLKADIGEEIDIEIPE 408
            +K  S GG  Y V F++DC+R   V   K K+          A      +  +KCIRTDNGGE+ G F     R+GI H+ TPP TPQ NG+AER    L E+   L+ +      +PR   WA+A+     V N S +    +   P  +WFGK  + DHLR  G          E  K+  K  +C+F+G   +   G      V   LVRSR++V  E Q +  ID ++K    D+G                   D  G  S G + I + +  ++ ++       +A  A               D  EP    +AMES+  D+W +A + E+  + EN  + + V  P+ +  +  + +Y+ K        +YK RLV +G+ Q +GV + E  +P +  +SIR +L++A   D E+     +  FL  D+ EE+ +E PE
Sbjct:   82 IKVRSHGGALYFVTFIDDCSRKLWVYTLKSKNQVFEVFKQFQASVERETRKKLKCIRTDNGGEYTGSFHEYCLRQGIIHQRTPPKTPQLNGLAERMNRTLIERVRCLLSDAK----LPRS-FWAEALNTVTHVINLSPSVPLRDDV-PDRVWFGKDVSYDHLRVFGCKTFVHVPKDEKSKLDAKTRQCIFIGYGLDGEFGYRLYDPVQKKLVRSRDVVFIEDQTIDDIDKTEKVDSQDSGDLINVNPVPLDSSPDLIQDDVHGDVSDGHQDIDDFDTLMDYVVNDQQQAPIAPPAVPLRRYSSDEYVLLTDGGEPECYEEAMESECKDQWVEAMKDELQSLHENHTF-ELVKLPEGKRALKNRWVYRLKQEDKSSSLRYKARLVVKGYTQKKGVDFEEIFSPVVKMSSIRTILSLAACYDLEVEQMDVKTAFLYGDLEEELYMEQPE 521          
BLAST of mRNA_F-serratus_M_contig1139.1210.1 vs. uniprot
Match: A0A6D2I1U2_9BRAS (Uncharacterized protein n=7 Tax=Microthlaspi erraticum TaxID=1685480 RepID=A0A6D2I1U2_9BRAS)

HSP 1 Score: 163 bits (412), Expect = 2.660e-39
Identity = 128/444 (28.83%), Postives = 211/444 (47.52%), Query Frame = 0
Query:    7 GGNSYVVIFVNDCNRFKVVKFAKKKSDTTAALSSLVADYITPQKLSIKCIRTDNGGEFEGEFQRELDRRGITHEHTPPDTPQYNGVAERALGLLREKTIILMEELNDVINVPREKLWAQAMLFSCDVTNKSVATSTDEGKSPHELWFGKFSTADHLRPLGAVGCAR-QSVREHKMAPKGEKCVFMGISQN-----FPTGTVSVLLVRSRNIVERQAVQWI-------DGSKKTRGDDTGSDDRGMKSAGGERITEEENGVED-----LLACDDGGQMAMQATIDKPEPTNRRQAMESQEWDEWWKAEETEMLGMVENCVYKQQVARPKDELVIGTKMIYKRKFGQDGKVEKYKCRLVAQGFWQVEGVHYTEKHTPTLSTASIRMLLAMAVTKDGELRHFYAEQEFLKADIGEEIDIEIPEELQEFPGA---VGRLNKAIYGFEK 429
            GG  Y V F++DC R+  V   + K +          +       +IK +R+D GGE++G F      +GI H+ T P +P+ NGVAER    L+E    +++E      +P + LW +A+L +  + NK     T  GK+P+ELW G   +  +L+  G +   +    ++  + PK   C+F+G + N     F      +  + +  I+E + V +        D  K  R  D         ++G      EEN VE      +      G+  +   + + EP    +AM + E D W +A  +EM  +++N  Y      P  +  +G + I+K K   DG ++KYK RLV QGF QVEG+ + + ++P     SIR+L+A+A  +D E+     +  FL  D+ EEI ++ PE     PG    V +L K++YG ++
Sbjct:  554 GGKKYFVTFIDDCTRYCYVYLLRSKDEVLEKFKEYKTEVEKQLGKTIKMVRSDRGGEYDGPFNAFCQEKGIIHQTTAPYSPESNGVAERKNRTLKEMMNAMLQESG----LP-QNLWGEALLATNYILNKIPHKVT--GKTPYELWKGSEPSYKYLKVWGCLAKVQVPPPKKVSIGPKTVDCIFIGYAHNSSAYRFLVHKSDIADIHANTIIESRNVSFFENIFPCKDRQKLKRTHDAIVPANEASTSGTSVNEAEENEVEPRRSKRVRKDKSFGEEYLVVFLCENEPRTYSEAMSTPEADLWKEAVNSEMDSILQNHTYIITDLPPGFK-ALGCRWIFKTKIKTDGAIDKYKARLVVQGFRQVEGLDFFDTYSPVTRITSIRILIAIASLRDLEIHQMDVKTAFLNGDLEEEIYMKQPEGFVT-PGQEHKVCKLVKSLYGLKQ 988          
BLAST of mRNA_F-serratus_M_contig1139.1210.1 vs. uniprot
Match: Q5MG99_IPOBA (Hypothetical retrotransposon n=1 Tax=Ipomoea batatas TaxID=4120 RepID=Q5MG99_IPOBA)

HSP 1 Score: 163 bits (412), Expect = 2.710e-39
Identity = 139/483 (28.78%), Postives = 220/483 (45.55%), Query Frame = 0
Query:    1 MKHSSLGGNSYVVIFVNDCNRFKVVKFAKKKSDTTAALSSLVADYITPQKLSIKCIRTDNGGEFEGEFQRELDRRGITHEHTPPDTPQYNGVAERALGLLREKTIILMEELNDVINVPREKLWAQAMLFSCDVTNKSVATSTDEGKSPHELWFGKFSTADHLRPLGAVGCARQSVREH-KMAPKGEKCVFMGIS-QNFPT---GTVSVLLVRSRNIV--ERQAVQWIDGSKKTRGDDTGS---------------DDRGMKSAGGERITEEENGVEDLLACDDG-----GQMAMQATIDKP-------------------------EPTNRRQAMESQEWDEWWKAEETEMLGMVENCVYKQQVARPKDELVIGTKMIYKRKFGQDGKVEKYKCRLVAQGFWQVEGVHYTEKHTPTLSTASIRMLLAMAVTKDGELRHFYAEQEFLKADIGEEIDIEIPE--ELQEFPGAVGRLNKAIYGFEK 429
            MK  SLGG SY V F++D +R   V   K KSD         A         +KCIRTDNGGE+ G F     R GI H+ TPP  PQ NG+AER    + E+   ++++      +P    WA+A+  +  V N S   +  + + P ++W GK  + DHLR  G          E  K+  K  +C+F+G     F       V   LVRSR++V  E Q ++ ID  K+    D+GS               D+       G+ + + +    D+    D       ++  Q  +D P                         EP +  +AMES +  +W++A + EM  +  N  + + V  PK+   +  + +Y+ K  +   V ++K RLV +GF Q +G+ + E  +P +  +SIR++L +A   D E+     +  FL  D+ EEI +E PE  +++     V RL K++YG ++
Sbjct:  488 MKVRSLGGASYFVTFIDDYSRKLWVYTLKHKSDVLGVFKEFHALVERQTGKKLKCIRTDNGGEYCGPFDEYCRRYGIRHQKTPPKIPQLNGLAERMNRTIMERVRCMLDDAK----LP-SSFWAEAVSTAVHVINLSPVIAL-KNEVPDKVWCGKDVSYDHLRVFGCKAFVHVPRDERSKLDSKTRQCIFIGYGFDEFGYRLYDPVEKKLVRSRDVVFFENQTIEDIDKVKQPESRDSGSLVDIEPVSRRYTDDVDEVQENVQNGDPVPDYQGDTVDVDGHADDVVHQEQEVPSQVPVDLPRRSDRERRPSTRYSPSQYVLLTDGGEPESYEEAMESDQKRQWFEAMQEEMNSLYVNDTF-ELVKAPKNRKALKNRWVYRVKHEEGTSVPRFKARLVVKGFSQKKGIDFDEIFSPVVKFSSIRVVLGLAARLDIEIEQMDVKTAFLHGDLDEEIYMEQPEGFKVKGKEDYVCRLKKSLYGLKQ 963          
BLAST of mRNA_F-serratus_M_contig1139.1210.1 vs. uniprot
Match: A0A224X581_9HEMI (Putative polyprotein (Fragment) n=1 Tax=Panstrongylus lignarius TaxID=156445 RepID=A0A224X581_9HEMI)

HSP 1 Score: 159 bits (403), Expect = 3.900e-38
Identity = 129/460 (28.04%), Postives = 219/460 (47.61%), Query Frame = 0
Query:    1 MKHSSLGGNSYVVIFVNDCNRFKVVKFAKKKSDTTAALSSLVADYITPQKLSIKCIRTDNGGEFEG-EFQRELDRRGITHEHTPPDTPQYNGVAERALGLLREKTIILMEELNDVINVPREKLWAQAMLFSCDVTNKSVATSTDEGKSPHELWFGKFSTADHLRPLGA-VGCARQSVREHKMAPKGEKCVFMGISQNFPTGTVSVLLVRSRNIVERQAVQWIDGSKKTRGDDTGSDDRGMKSAGGERI-----TEEENGVEDL----------------------------LACDDGGQMAMQAT-IDKPEPTNR------------RQAMESQEWDEWWKAEETEMLGMVENCVYKQQVARPKDELVIGTKMIYKRKFGQDGKVEKYKCRLVAQGFWQVEGVHYTEKHTPTLSTASIRMLLAMAVTKDGELRHFYAEQEFLKADIGEEIDIEIPEELQE 412
            M+  S G   Y V F++D +R+  V+F K K +   A    VA   T +   I+C+++DNG EF   EF   L  +GI    T   TPQ NG+AER    L +    L+ E      +P    WA+A+  S  + N+   +S  EGK+P+ELW G+     + +  G+ V C  +  R+ K   + E+ +F+G S+   +    +   +++ +   + V++++       +D+  ++  ++S G E I     +EE    +D+                            + C   G+   Q   I+  +P               + A+ S E DEW+ A   E+  +++N  +K  V+RP+D+ VIG++++ + K+  DG +E+ K RLVAQGF Q  GVH++E   P    +S+R+L A+A   D ++  F     FL  ++ EEI +E P+ L E
Sbjct:  478 MRIESNGKARYFVTFIDDNSRWCEVRFIKSKDEVLQAFKEFVALIETQKGKKIRCLQSDNGTEFVNKEFDDFLKAKGIKRRLTVSYTPQQNGIAERKNRTLLDMARCLISESK----LP-PSFWAEAVYTSNYIRNR-CPSSCLEGKTPYELWTGRKPNVSYFKEFGSKVFCLNKDPRKGKFEDRSEEGIFLGYSEE--SKGFRIWKPKTKKVEITRDVKFLEKQNTISNEDSNLEEEKLESKGQEFIEIEFKSEEPGTFQDICDSQSSDVVEENTSEIRVMKRLPGRPKRIRCGRRGRPRKQYNEIEIIQPDEEVAEYACLSEVPMKSALSSSEADEWFNAMMEEIKSVIKNKTWKI-VSRPEDQHVIGSRIVLRNKYKPDGTLERRKARLVAQGFSQKPGVHFSETFAPVCRLSSVRLLAALAAHHDMKIHQFDITAAFLNGELEEEIYMEPPKYLTE 928          
BLAST of mRNA_F-serratus_M_contig1139.1210.1 vs. uniprot
Match: A0A438DWY0_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=3 Tax=Vitis vinifera TaxID=29760 RepID=A0A438DWY0_VITVI)

HSP 1 Score: 158 bits (399), Expect = 1.240e-37
Identity = 136/478 (28.45%), Postives = 224/478 (46.86%), Query Frame = 0
Query:    4 SSLGGNSYVVIFVNDCNRFKVVKFAKKKSDTTAALSSLVADYITPQKLSIKCIRTDNGGEF-EGEFQRELDRRGITHEHTPPDTPQYNGVAERALGLLREKTII-LMEELNDVINVPREKLWAQAMLFSCDVTNKSVATSTDEGKSPHELWFGKFSTADHLRPLGAVGCAR-QSVREHKMAPKGEKCVFMGISQNFPT----GTVSVLLVRSRNIVERQAVQWI-DGSKKTRG--DDTGSDDRGM-------------------KSAGGERITEEENGV----------------EDL----LACDDGGQMAMQATIDKPEPTNRRQAMESQEWDEWWKAEETEMLGMVENCVYKQQVARPKDELVIGTKMIYKRKFGQDGKVEKYKCRLVAQGFWQVEGVHYTEKHTPTLSTASIRMLLAMAVTKDGELRHFYAEQEFLKADIGEEIDIEIPEEL--QEFPGAVGRLNKAIYGFEKE 430
            +S GG  Y++IF++D +R   V F ++KS+  +A  S  A      + SIK +RTD GGE+   EF+   D +GI  E T   TPQ NGV+ER     + KTI+ ++  L     +P+   WA+AM +S  V N+S  T   +  +P E W G+  T DH +  G +  A     +  K+  KGEKCVF+G+S+          ++  +V SR+++  +   W  +G + T+   D+   ++R                      +A     T  E+ V                +D     +  D+   +A  A +   +P   ++A++  +W +    E    +G +E     + V  PK++  IG K +YK K  +DG V+KYK RLVA+G+ +  GV Y E   P     +I ++L+MA      +     +  FL  ++ EE+ I+ P     Q +   V +L KA+Y  ++E
Sbjct:  416 TSNGGKKYLIIFIDDYSRKTWVSFLQEKSEAFSAFKSFRARVEKETRRSIKILRTDRGGEYCSNEFEHFCDDQGIRRELTVAYTPQQNGVSER-----KNKTILNMVRSLLARGKIPKS-FWAKAMNWSIHVLNRSP-TFFVQNMTPEEAWSGRKPTVDHFKIFGCIAYAHVPDEKRKKLDDKGEKCVFLGVSEASKAYKLFNPLTKKIVISRDVIFDEESTWNWNGQQPTQVIFDNDAEEERQQLLQQQIPTVSIPESTPNDAPTAAETSSTAVESNVVAESRLRHVRKRPAWMQDFEVTGVQSDNYDTIAHYALLSDCDPITFQEAIKDLKWHKAMNEE----IGSIEKNNSWELVELPKEQKSIGVKWVYKTKLNKDGGVDKYKARLVAKGYKKEFGVDYKELFAPVAKLDTIHLVLSMAAQNSWSIHQLDVKSAFLHGELEEEVYIDQPPGYVKQGYENQVYKLKKALYKLKQE 882          
BLAST of mRNA_F-serratus_M_contig1139.1210.1 vs. uniprot
Match: A0A7D9D6Q5_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9D6Q5_PARCT)

HSP 1 Score: 157 bits (397), Expect = 1.990e-37
Identity = 136/484 (28.10%), Postives = 218/484 (45.04%), Query Frame = 0
Query:    1 MKHSSLGGNSYVVIFVNDCNRFKVVKFAKKKSDTTAALSSLVADYITPQKLSIKCIRTDNGGEFEG-EFQRELDRRGITHEHTPPDTPQYNGVAERALGLLREKTIILMEELNDVINVPREKLWAQAMLFSCDVTNKSVATSTDEGKSPHELWFGKFSTADHLRPLGAVGCAR-QSVREHKMAPKGEKCVFMGISQNFPTGT--------VSVLLVRSRNIVE-RQAVQWIDGSKKTRGDDTGSDD-------------RGMKSAGGERITEEENGVEDLLACDDGGQ-----------------------------MAMQATIDKPEPTNRRQAMESQEWDEWWKAEETEMLGMVENCVYKQQVARPKDELVIGTKMIYKRKFGQDGKVEKYKCRLVAQGFWQVEGVHYTEKHTPTLSTASIRMLLAMAVTKDGELRHFYAEQEFLKADIGEEIDIEIPEEL--QEFPGAVGRLNKAIYGFEK 429
            M   SLGG+ Y V F++D +R+  V F K KS+            +      IK + +DNGGE+   EF+  L + GI H+ + P  P  NGVAER    + E T  ++   +    +P E  WA+A+  S  V N+S   + ++  +P+E  F K     +LR  G +        +  K+  K  K +FMG    +P G         VS   +RSR+++   +     D    +  DD   DD                     +R+ E   G +       GG                              +A   T D  EP N  +A   +   EW +A ++E   ++EN  + + V+ PK + V+G+K ++K K  ++G V++YK RLVAQG+ Q EGV Y+E  +P +   +IR LLA++  K+ E+     +  FL+ ++ EEI +  P+    +E P  V +L K+IYG ++
Sbjct:  492 MSVPSLGGSRYYVSFIDDYSRYIFVYFMKNKSEVLEKFKEFHTYAMNITGKPIKVLHSDNGGEYSSKEFESFLKKNGIVHQLSVPYNPAQNGVAERMNRTVVETTRSMLSHAH----IPNE-FWAEAVNTSVYVRNRSPTKALND-ITPYECLFEKKPDVSNLRVFGCITYMHIPDNQRKKLDAKSRKSIFMG----YPEGVKGYKLYDPVSRKFLRSRDVIFLEKKFHDFDIQTSSNFDDRAEDDIPIMIEETPVDGNENQDEIANQRVAENAEGNQQANDQPVGGTFEETFMNEVRNVGEHRMRTPPNRFDEECYLANDITADINEPINMDEAFSGEHSAEWKQATDSENNSLIENETW-ELVSLPKGKNVVGSKWVFKVKTDENGCVQRYKARLVAQGYTQAEGVDYSEVFSPVVRNTTIRSLLALSNAKNWEVHQMDVKTAFLQGNLEEEIYMRQPDGYVNKELPNHVCKLKKSIYGLKQ 964          
BLAST of mRNA_F-serratus_M_contig1139.1210.1 vs. uniprot
Match: A0A6A2WPM4_HIBSY (Integrase catalytic domain-containing protein n=1 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A2WPM4_HIBSY)

HSP 1 Score: 156 bits (395), Expect = 4.110e-37
Identity = 134/447 (29.98%), Postives = 208/447 (46.53%), Query Frame = 0
Query:    2 KHSSLGGNSYVVIFVNDCNRFKVVKFAKKKSDTTAALSSLVADYITPQKLSIKCIRTDNGGEFEGE-FQRELDRRGITHEHTPPDTPQYNGVAERALGLLREKTIILMEELNDVINVPREKLWAQAMLFSCDVTNKSVATSTDEGKSPHELWFGKFSTA-DHLRPLGAVGCARQSVREHKMAPKGEKCVFMGI--------------SQNFPTGTVSVLLVRSRNIVERQAVQWIDGSKKTRGDDTGSDDRGMKSAGGERITEEENGVEDLLACDDGGQMAMQATIDKPEPTNRRQAMESQEWDEWWKAEETEMLGMVENCVYKQQVARPKDELVIGTKMIYKRKFGQDGKVE-KYKCRLVAQGFWQVEGVHYTEKHTPTLSTASIRMLLAMAVTKDGELRHFYAEQEFLKADIGEEIDIEIPE--ELQEFPGAVGRLNKAIYGFEK 429
            K +SLGG  Y V FV+D +R   V   K   +             T     IKC+RTDNGGE++ + F +  +  GI    T   TPQ NGVAER    L EK   ++           ++ WA+A++++C + N+  +T+   GK+P E WFG  +T  D L   G+   A   V+E K+ P+ +K +FMGI              SQ         +     N V+   V+     ++ +  +       +    G+R   +     D+++       A   TID   P    +A++S E  +W  A   EM  + +N  +K   + PK +  IG K +Y +K G   K   +YK RLVA+G+ Q EGV Y E  +P +  +SIR+LLA+    D EL     +  FL  D+ EEI +  P+  ++ E    V +L K++YG ++
Sbjct:  472 KTTSLGGTHYYVTFVDDFSRRVWVYPMKTNDEVLGFFLKWKKMMETQTGRKIKCLRTDNGGEYKNDPFLKVCEEEGIVRHFTVRGTPQQNGVAERMNRTLVEKVRCMLSNAG-----LGKEFWAEALVYACHLVNRLPSTAIG-GKTPLEKWFGVPATDYDSLHVFGST--AYYHVKESKLDPRAKKAIFMGITSGDFRKIGADRWNSQKVEFEGSKFVPTSKENDVDSPMVEEESDEEEVQTQEPPQQHESIALRKGKRTIRQPARYADMVS------FASPITIDDV-PATFNEAVQSSEHKKWRIAMNEEMQSLQKNQTWKL-ASLPKGKKAIGCKWVYAKKDGFPDKNNIRYKERLVAKGYAQTEGVDYNEVFSPVVKHSSIRILLALVAQLDLELVQMDVKNAFLHGDLDEEIYMTQPDGFKVAEKEEMVCKLEKSLYGLKQ 902          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1139.1210.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KN22_9PHAE1.410e-4329.80Integrase catalytic domain-containing protein n=1 ... [more]
UPI001EFFA5617.240e-4027.85DDE-type integrase/transposase/recombinase n=1 Tax... [more]
A0A8J6D8V3_9ROSI9.300e-4029.38Uncharacterized protein n=1 Tax=Gossypium anomalum... [more]
A0A8J6CG45_9ROSI1.020e-3929.75Integrase catalytic domain-containing protein n=1 ... [more]
A0A6D2I1U2_9BRAS2.660e-3928.83Uncharacterized protein n=7 Tax=Microthlaspi errat... [more]
Q5MG99_IPOBA2.710e-3928.78Hypothetical retrotransposon n=1 Tax=Ipomoea batat... [more]
A0A224X581_9HEMI3.900e-3828.04Putative polyprotein (Fragment) n=1 Tax=Panstrongy... [more]
A0A438DWY0_VITVI1.240e-3728.45Retrovirus-related Pol polyprotein from transposon... [more]
A0A7D9D6Q5_PARCT1.990e-3728.10Retrovirus-related Pol poly from transposon TNT 1-... [more]
A0A6A2WPM4_HIBSY4.110e-3729.98Integrase catalytic domain-containing protein n=1 ... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 312..429
e-value: 1.8E-20
score: 73.7
IPR001584Integrase, catalytic corePFAMPF00665rvecoord: 6..102
e-value: 5.6E-13
score: 49.1
IPR001584Integrase, catalytic corePROSITEPS50994INTEGRASEcoord: 1..156
score: 17.378
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 1..173
e-value: 7.8E-19
score: 69.6
NoneNo IPR availablePANTHERPTHR11439:SF265coord: 53..95
NoneNo IPR availablePANTHERPTHR11439:SF265coord: 250..377
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 53..95
coord: 250..377
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 8..160

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1139contigF-serratus_M_contig1139:285731..287988 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1139.1210.1mRNA_F-serratus_M_contig1139.1210.1Fucus serratus malemRNAF-serratus_M_contig1139 285716..288207 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1139.1210.1 ID=prot_F-serratus_M_contig1139.1210.1|Name=mRNA_F-serratus_M_contig1139.1210.1|organism=Fucus serratus male|type=polypeptide|length=497bp
MKHSSLGGNSYVVIFVNDCNRFKVVKFAKKKSDTTAALSSLVADYITPQK
LSIKCIRTDNGGEFEGEFQRELDRRGITHEHTPPDTPQYNGVAERALGLL
REKTIILMEELNDVINVPREKLWAQAMLFSCDVTNKSVATSTDEGKSPHE
LWFGKFSTADHLRPLGAVGCARQSVREHKMAPKGEKCVFMGISQNFPTGT
VSVLLVRSRNIVERQAVQWIDGSKKTRGDDTGSDDRGMKSAGGERITEEE
NGVEDLLACDDGGQMAMQATIDKPEPTNRRQAMESQEWDEWWKAEETEML
GMVENCVYKQQVARPKDELVIGTKMIYKRKFGQDGKVEKYKCRLVAQGFW
QVEGVHYTEKHTPTLSTASIRMLLAMAVTKDGELRHFYAEQEFLKADIGE
EIDIEIPEELQEFPGAVGRLNKAIYGFEKEEMGKFPYREAVEALMWTATM
TRPDIVCAVRAVTRFCENPWQAHKKAVMRIFHHLLHTKEWGTTYGG*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2
IPR001584Integrase_cat-core
IPR036397RNaseH_sf
IPR039537Retrotran_Ty1/copia-like
IPR012337RNaseH-like_sf