prot_F-serratus_M_contig1138.1193.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1138.1193.1
Unique Nameprot_F-serratus_M_contig1138.1193.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length140
Homology
BLAST of mRNA_F-serratus_M_contig1138.1193.1 vs. uniprot
Match: D8LJN5_ECTSI (Ubiquitin conjugating enzyme n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJN5_ECTSI)

HSP 1 Score: 54.3 bits (129), Expect = 1.630e-6
Identity = 30/52 (57.69%), Postives = 34/52 (65.38%), Query Frame = 0
Query:   94 RPGEAARYNDRLQVLAQWNRNTALS------RNEMAGPSNRRLPQPPEGTEF 139
            R GE   + ++L VLAQWNRN  +       RNEMA PSNRRL QP EGTEF
Sbjct:   97 RSGEV--FRNKLPVLAQWNRNYGIEQVLVALRNEMASPSNRRLQQPSEGTEF 146          
BLAST of mRNA_F-serratus_M_contig1138.1193.1 vs. uniprot
Match: UPI00044167F1 (UBC-like protein n=1 Tax=Punctularia strigosozonata (strain HHB-11173) TaxID=741275 RepID=UPI00044167F1)

HSP 1 Score: 52.8 bits (125), Expect = 5.510e-6
Identity = 25/42 (59.52%), Postives = 30/42 (71.43%), Query Frame = 0
Query:  104 RLQVLAQWNRNTALS------RNEMAGPSNRRLPQPPEGTEF 139
            +L VLA WNRN ++       R EMAGPSNR+LPQPPEG+ F
Sbjct:   98 KLPVLAHWNRNNSIETVLVEIRREMAGPSNRKLPQPPEGSTF 139          
BLAST of mRNA_F-serratus_M_contig1138.1193.1 vs. uniprot
Match: A0A2D4BCZ8_PYTIN (DNA topoisomerase 2 DNA gyrase B n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BCZ8_PYTIN)

HSP 1 Score: 50.8 bits (120), Expect = 3.350e-5
Identity = 25/42 (59.52%), Postives = 29/42 (69.05%), Query Frame = 0
Query:  104 RLQVLAQWNRNTALS------RNEMAGPSNRRLPQPPEGTEF 139
            RL VLA WNRN+ +       R EMA P+NRRLPQPPEG+ F
Sbjct:  106 RLPVLANWNRNSGIETVLIALRAEMASPTNRRLPQPPEGSTF 147          
BLAST of mRNA_F-serratus_M_contig1138.1193.1 vs. uniprot
Match: A0A8K1CG64_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CG64_PYTOL)

HSP 1 Score: 50.8 bits (120), Expect = 6.840e-5
Identity = 26/42 (61.90%), Postives = 28/42 (66.67%), Query Frame = 0
Query:  104 RLQVLAQWNRNTALS------RNEMAGPSNRRLPQPPEGTEF 139
            RL VLA WNRN  L       R EMA P+NRRLPQPPEG+ F
Sbjct:  163 RLAVLANWNRNNGLETVLIGLRAEMASPTNRRLPQPPEGSMF 204          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1138.1193.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LJN5_ECTSI1.630e-657.69Ubiquitin conjugating enzyme n=2 Tax=Ectocarpus Ta... [more]
UPI00044167F15.510e-659.52UBC-like protein n=1 Tax=Punctularia strigosozonat... [more]
A0A2D4BCZ8_PYTIN3.350e-559.52DNA topoisomerase 2 DNA gyrase B n=1 Tax=Pythium i... [more]
A0A8K1CG64_PYTOL6.840e-561.90Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1138contigF-serratus_M_contig1138:4062..13299 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1138.1193.1mRNA_F-serratus_M_contig1138.1193.1Fucus serratus malemRNAF-serratus_M_contig1138 4062..13299 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1138.1193.1 ID=prot_F-serratus_M_contig1138.1193.1|Name=mRNA_F-serratus_M_contig1138.1193.1|organism=Fucus serratus male|type=polypeptide|length=140bp
DDNCDRRGYYGPAQLQAVGGAREGRKGRGGSQRELWPGGRGRYLHDRLER
NRPWTERDSARGPALHVEDSLRRELSRSVPARALREQAQHGLCRPGEAAR
YNDRLQVLAQWNRNTALSRNEMAGPSNRRLPQPPEGTEF*
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