prot_F-serratus_M_contig1134.1192.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_F-serratus_M_contig1134.1192.1
Unique Name	prot_F-serratus_M_contig1134.1192.1
Type	polypeptide
Organism	Fucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length	587

Homology

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BLAST of mRNA_F-serratus_M_contig1134.1192.1 vs. uniprot
Match: D7FWV4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWV4_ECTSI)

HSP 1 Score: 194 bits (494), Expect = 1.010e-53
Identity = 122/252 (48.41%), Postives = 135/252 (53.57%), Query Frame = 0

Query:   26 IVASPSPRRQ----GAAAGP------------PGIPSVER--------TSPTLLDVSVLVARGGWIDLRSGKHLQEASGTLCRDCREHVGSHLRVDYSTPRLLWPLRVTRNVL----------------PASAGMGGDG---------------------------------------------KQASLPPLRVTGMTWERPLGDLSRGRALPAGLENLKFACSFRYFDVECVTFPSSLLSVSFGQNFDQSI 192
            + ASP P R     GAAA P            PG P+           T P+LLDVS LVA GGW+DL SGKHLQEASGTLCRDCRE+VGSHLRVDYSTPR LWPLR    VL                 A+A  GG G                                             K  S+PPLRVT MTWERPL DL+ GRALP GL +L FACSFRYFDV  V+FP+SLLS+SFGQNFDQS+
Sbjct:   40 LPASPPPSRGAAAVGAAASPATAADPEPSVLAPGSPATXXXXXXXXAGTGPSLLDVSFLVASGGWLDLASGKHLQEASGTLCRDCREYVGSHLRVDYSTPRALWPLRTVGVVLFGKGPGGGGRVHGIGNSAAAASGGVGVRRLAGGFIGKENAGGTGYRTGASSSASGGKGGLLSSRLQQQYGWKGRSIPPLRVTTMTWERPLSDLAHGRALPPGLHSLHFACSFRYFDVGWVSFPTSLLSLSFGQNFDQSV 291

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BLAST of mRNA_F-serratus_M_contig1134.1192.1 vs. uniprot
Match: A0A6H5KHB9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHB9_9PHAE)

HSP 1 Score: 191 bits (485), Expect = 3.110e-49
Identity = 109/206 (52.91%), Postives = 121/206 (58.74%), Query Frame = 0

Query:   52 PTLLDVSVLVARGGWIDLRSGKHLQEASGTLCRDCREHVGSHLRVDYSTPRLLWPLR-------------------VTRNVLPASAGMG-----------------------------GDG---------------KQASLPPLRVTGMTWERPLGDLSRGRALPAGLENLKFACSFRYFDVECVTFPSSLLSVSFGQNFDQSIDS 194
            P+LLDVS LVA GGW+DL SGKHLQEASGTLCRDCRE+VGSHLRVDYSTPR LWPLR                   +  +V  AS G+G                             G G               K  S+PPLRVT MTWERPL DL+ GRALP GL +L  ACSFRYFDV  V+FP+SLLS+SFGQNFDQ IDS
Sbjct:   70 PSLLDVSFLVASGGWLDLASGKHLQEASGTLCRDCREYVGSHLRVDYSTPRALWPLRTAGVVLFGRGPGGGGRMLSIGNSVATASGGVGVRRLAAGFNGKENAGGTGYRTGGSSSASGGKGGLLPWRLQQQQQHGWKGQSIPPLRVTTMTWERPLSDLAHGRALPPGLHSLHLACSFRYFDVGWVSFPTSLLSLSFGQNFDQGIDS 275

The following BLAST results are available for this feature:

BLAST of mRNA_F-serratus_M_contig1134.1192.1 vs. uniprot

BLAST of mRNA_F-serratus_M_contig1134.1192.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D7FWV4_ECTSI	1.010e-53	48.41	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5KHB9_9PHAE	3.110e-49	52.91	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR032675	Leucine-rich repeat domain superfamily	GENE3D	3.80.10.10		coord: 306..471 e-value: 1.4E-5 score: 25.7
IPR008615	FNIP	PFAM	PF05725	FNIP	coord: 430..472 e-value: 2.0E-9 score: 37.5 coord: 298..325 e-value: 1.2E-5 score: 25.4 coord: 210..251 e-value: 3.5E-5 score: 23.9 coord: 254..296 e-value: 1.1E-8 score: 35.1 coord: 364..404 e-value: 5.8E-7 score: 29.6
None	No IPR available	PANTHER	PTHR32134	UNCHARACTERIZED	coord: 374..544 coord: 166..400
None	No IPR available	PANTHER	PTHR32134	UNCHARACTERIZED	coord: 247..433
None	No IPR available	PANTHER	PTHR32134:SF132		coord: 247..433
None	No IPR available	PANTHER	PTHR32134	UNCHARACTERIZED	coord: 333..476
None	No IPR available	PANTHER	PTHR32134:SF132		coord: 374..544 coord: 166..400 coord: 333..476
None	No IPR available	SUPERFAMILY	52058	L domain-like	coord: 165..469

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
F-serratus_M_contig1134	contig	F-serratus_M_contig1134:280327..296357 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Fucus serratus MALE	2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90	2022-09-16
OGS1.0 of Fucus serratus male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_F-serratus_M_contig1134.1192.1	mRNA_F-serratus_M_contig1134.1192.1	Fucus serratus male	mRNA	F-serratus_M_contig1134 280306..296357 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_F-serratus_M_contig1134.1192.1 ID=prot_F-serratus_M_contig1134.1192.1|Name=mRNA_F-serratus_M_contig1134.1192.1|organism=Fucus serratus male|type=polypeptide|length=587bp
MAQQDDRRRRREDTSNMETQLAKCRIVASPSPRRQGAAAGPPGIPSVERT
SPTLLDVSVLVARGGWIDLRSGKHLQEASGTLCRDCREHVGSHLRVDYST
PRLLWPLRVTRNVLPASAGMGGDGKQASLPPLRVTGMTWERPLGDLSRGR
ALPAGLENLKFACSFRYFDVECVTFPSSLLSVSFGQNFDQSIDSVAWPPH
LQRLAFGWEFNRSIDGAQWPPGLKRLTFGQSFDRPIHAVSWPLALEELTF
GGRFNQPIHGGVFPPGLRYLTFGWRFNQPIVEVAWPPRLQRLMFGSLFNQ
PVEGVEWPPGLEKLIFGRVFNQQIQGTVWASGLRQLALGDFFDQALNDVA
WPPSLEQLSLGNKFNQAVKGVTFPSRLQQLAFGWRFDQPISDVVWPTNLK
QLTFDGGFNQPVDGVVWPSELKQLTLGRNFNQPIRGVSFPIGLERLDLGD
SFNQPIAGVVWPDTLEQLTFGQAFDQEIEGDGSVRWPLQLKRLAFGGSFN
QCVDSVGWPPLLEELTFGREFSQPVDRVTWPSGLKKLGFGHRFDPASLER
PGVARETQGGPRRANLAGGHRRKAPPSLAGLGRRRVG

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR032675	LRR_dom_sf
IPR008615	FNIP