prot_F-serratus_M_contig1134.1185.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1134.1185.1
Unique Nameprot_F-serratus_M_contig1134.1185.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length257
Homology
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BLAST of mRNA_F-serratus_M_contig1134.1185.1 vs. uniprot
Match: D7G257_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G257_ECTSI)

HSP 1 Score: 158 bits (400), Expect = 1.310e-40
Identity = 89/189 (47.09%), Postives = 115/189 (60.85%), Query Frame = 0 
Query:    5 CGDN-YAGLCTRNG-GICMDSDGSYDVQVPADTPPGIYAVMVTSFDNSTVASCSPAFNVTAPEDTQAAAAVKGEPFL-EVLYPA---DYLDRGSAFTARWIYDDGAGDAEGTFEVNLKRCMSESGDCDDENCGIHAAYLCEDPGCYDPGTGDYDVVIPADLEEGQYTLEVINVED-QTSDCLEFAFDVV 186
            CGD   A LCTR   G+C DSDGSYDVQ+P D   G Y++ +   D+ +V +C+ AFNVT P      A + GE  + EV   A    YL++G+AFT+RW+YDDG G   GTFE+NL  C  E G C++  CG  +       GCYDPGTGDYDV +PAD   G+Y LEV++ +D   S C   +F VV
Sbjct:   59 CGDEALASLCTREAAGVCSDSDGSYDVQIPEDAEAGKYSIKIMLADDDSVYACTDAFNVTRPTGEDGLAILAGEASVSEVEVEAASSTYLEQGAAFTSRWVYDDGGGAGGGTFEINLNACGDE-GACENGGCGTFSTAXXXXXGCYDPGTGDYDVTVPADQAVGEYKLEVVSADDTDVSSCTASSFLVV 246
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BLAST of mRNA_F-serratus_M_contig1134.1185.1 vs. uniprot
Match: A0A6H5KPZ5_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KPZ5_9PHAE)

HSP 1 Score: 58.9 bits (141), Expect = 1.330e-6
Identity = 38/98 (38.78%), Postives = 53/98 (54.08%), Query Frame = 0 
Query:   75 GEPFLEVLYP-ADYLD-RGSAFTARWIYDDGAGDAEGTFEVNLKRCMSESGDCDDENCGIHAAYLCEDP--GCYDPGTGDYDVVIPADLEEGQYTLEV 168
            G P +EV+ P A+ L   G  +T  + YD+G G+  G F+++L +           +CG     +C+ P  GC D   GDYDVVIPAD EEG Y + V
Sbjct:  147 GGPTMEVVAPEANALAVAGETYTVEFDYDNGFGEQLGRFKIDLYKAEGNG------DCGSWVTSVCDKPDMGCRD-SEGDYDVVIPADSEEGMYKIRV 237
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1134.1185.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G257_ECTSI1.310e-4047.09Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=... [more]
A0A6H5KPZ5_9PHAE1.330e-638.78Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1134contigF-serratus_M_contig1134:76874..108626 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1134.1185.1mRNA_F-serratus_M_contig1134.1185.1Fucus serratus malemRNAF-serratus_M_contig1134 76874..108626 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1134.1185.1 ID=prot_F-serratus_M_contig1134.1185.1|Name=mRNA_F-serratus_M_contig1134.1185.1|organism=Fucus serratus male|type=polypeptide|length=257bp
SGSSCGDNYAGLCTRNGGICMDSDGSYDVQVPADTPPGIYAVMVTSFDNS
TVASCSPAFNVTAPEDTQAAAAVKGEPFLEVLYPADYLDRGSAFTARWIY
DDGAGDAEGTFEVNLKRCMSESGDCDDENCGIHAAYLCEDPGCYDPGTGD
YDVVIPADLEEGQYTLEVINVEDQTSDCLEFAFDVVSGDDSASTLEPSHS
PPPSSAPRSVATTVAPAGTLSSVSPAGGPTPSPATTTLPPIPTTVATTSA
PSVSAPT
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