prot_F-serratus_M_contig1122.1121.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1122.1121.1
Unique Nameprot_F-serratus_M_contig1122.1121.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length105
Homology
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BLAST of mRNA_F-serratus_M_contig1122.1121.1 vs. uniprot
Match: D7G872_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G872_ECTSI)

HSP 1 Score: 107 bits (268), Expect = 4.840e-25
Identity = 54/79 (68.35%), Postives = 61/79 (77.22%), Query Frame = 0 
Query:   27 TGSRQQGELIKMMAFFGALVGLIAFMYDSAMDLALHIVWKAIPRMFERAAAQTEDGLEILSRWAFLYTIAASIILATGA 105
            T S +QGELIKMM  FG LVGL+AF+YD AM+L+L IVWK IP   ER A Q EDGL +LS+W FLYTIAASI LAT A
Sbjct:  614 TASYRQGELIKMMILFGFLVGLVAFLYDGAMELSLKIVWKVIPGYLERIAEQAEDGLAMLSKWGFLYTIAASIFLATAA 692
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1122.1121.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G872_ECTSI4.840e-2568.35Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 85..104
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 39..65
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 105..105
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..38
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 66..84
NoneNo IPR availableTMHMMTMhelixcoord: 42..64
NoneNo IPR availableTMHMMTMhelixcoord: 85..104

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1122contigF-serratus_M_contig1122:53982..58246 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1122.1121.1mRNA_F-serratus_M_contig1122.1121.1Fucus serratus malemRNAF-serratus_M_contig1122 31778..58246 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1122.1121.1 ID=prot_F-serratus_M_contig1122.1121.1|Name=mRNA_F-serratus_M_contig1122.1121.1|organism=Fucus serratus male|type=polypeptide|length=105bp
MNLQTASATPTAKVVPPEEYRVSPISTGSRQQGELIKMMAFFGALVGLIA
FMYDSAMDLALHIVWKAIPRMFERAAAQTEDGLEILSRWAFLYTIAASII
LATGA
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