prot_F-serratus_M_contig112.1106.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig112.1106.1
Unique Nameprot_F-serratus_M_contig112.1106.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length101
Homology
BLAST of mRNA_F-serratus_M_contig112.1106.1 vs. uniprot
Match: D7FL45_ECTSI (Plastoquinol--plastocyanin reductase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FL45_ECTSI)

HSP 1 Score: 178 bits (452), Expect = 8.540e-55
Identity = 79/99 (79.80%), Postives = 86/99 (86.87%), Query Frame = 0
Query:    1 LADILQGDATYLSVTSDNKIQDYGINAVCTHLGCVVPWNAAENKFICRCHGSQYDATGKVVRGPAPLSLALAHVEETGGKVILKEWKEADFRTGDSPWW 99
            LA+ ++GDATYL VT D K+QDYGI AVCTHLGCVVPWN AENKF+C CHGSQYD TGKV+RGPAPLSLAL+HVEE  GKVI KEWKE DFRTGD PWW
Sbjct:  126 LAEGIKGDATYLVVTEDKKVQDYGIVAVCTHLGCVVPWNKAENKFMCPCHGSQYDQTGKVIRGPAPLSLALSHVEEVDGKVIFKEWKETDFRTGDKPWW 224          
BLAST of mRNA_F-serratus_M_contig112.1106.1 vs. uniprot
Match: UCRI_SYNE7 (Cytochrome b6-f complex iron-sulfur subunit n=3 Tax=Synechococcus elongatus TaxID=32046 RepID=UCRI_SYNE7)

HSP 1 Score: 164 bits (415), Expect = 8.990e-50
Identity = 75/96 (78.12%), Postives = 78/96 (81.25%), Query Frame = 0
Query:    5 LQGDATYLSVTSDNKIQDYGINAVCTHLGCVVPWNAAENKFICRCHGSQYDATGKVVRGPAPLSLALAHVEETGGKVILKEWKEADFRTGDSPWWA 100
            L+GD TYL V S   I DYGINAVCTHLGCVVPWNA+ENKF C CHGSQYDATGKVVRGPAPLSLALAHV  T  KV L  W E DFRTGD+PWWA
Sbjct:   84 LKGDPTYLVVESSEAIGDYGINAVCTHLGCVVPWNASENKFKCPCHGSQYDATGKVVRGPAPLSLALAHVSVTDDKVFLSPWTETDFRTGDNPWWA 179          
BLAST of mRNA_F-serratus_M_contig112.1106.1 vs. uniprot
Match: A0A846A2U6_9CYAN (Cytochrome b6-f complex iron-sulfur subunit n=1 Tax=Leptolyngbya sp. SIO4C5 TaxID=2607774 RepID=A0A846A2U6_9CYAN)

HSP 1 Score: 164 bits (415), Expect = 9.270e-50
Identity = 74/101 (73.27%), Postives = 83/101 (82.18%), Query Frame = 0
Query:    1 LADILQGDATYLSVTSDNKIQDYGINAVCTHLGCVVPWNAAENKFICRCHGSQYDATGKVVRGPAPLSLALAHVEET-GGKVILKEWKEADFRTGDSPWWA 100
            LA  L+GD TYL VT    ++DYGIN++CTHLGCVVPWNA+ENKFIC CHGSQYDATGKVVRGPAPLSLALAH + T   KV+L  W E DFRTGD+PWWA
Sbjct:   80 LAQGLKGDPTYLVVTESGSLEDYGINSICTHLGCVVPWNASENKFICPCHGSQYDATGKVVRGPAPLSLALAHADVTEDDKVVLSPWTETDFRTGDNPWWA 180          
BLAST of mRNA_F-serratus_M_contig112.1106.1 vs. uniprot
Match: UPI001A0E73EF (Cytochrome b6-f complex iron-sulfur subunit n=1 Tax=Oscillatoriaceae cyanobacterium M7585_C2015_266 TaxID=2774341 RepID=UPI001A0E73EF)

HSP 1 Score: 161 bits (408), Expect = 1.040e-48
Identity = 73/100 (73.00%), Postives = 80/100 (80.00%), Query Frame = 0
Query:    1 LADILQGDATYLSVTSDNKIQDYGINAVCTHLGCVVPWNAAENKFICRCHGSQYDATGKVVRGPAPLSLALAHVEETGGKVILKEWKEADFRTGDSPWWA 100
            LA  L+GD TY+ V S++ I +YGINAVCTHLGCVVPWNA+ENKFIC CHGSQYD TGKVVRGPAPLSLAL HVE    KV L  W E DFRTG+ PWWA
Sbjct:   80 LAQGLKGDPTYIVVESESSIANYGINAVCTHLGCVVPWNASENKFICPCHGSQYDTTGKVVRGPAPLSLALVHVEVVDDKVTLTPWTETDFRTGEDPWWA 179          
BLAST of mRNA_F-serratus_M_contig112.1106.1 vs. uniprot
Match: UPI0016896140 (cytochrome b6-f complex iron-sulfur subunit n=1 Tax=Oscillatoria sp. FACHB-1406 TaxID=2692846 RepID=UPI0016896140)

HSP 1 Score: 161 bits (408), Expect = 1.040e-48
Identity = 71/100 (71.00%), Postives = 82/100 (82.00%), Query Frame = 0
Query:    1 LADILQGDATYLSVTSDNKIQDYGINAVCTHLGCVVPWNAAENKFICRCHGSQYDATGKVVRGPAPLSLALAHVEETGGKVILKEWKEADFRTGDSPWWA 100
            LA  L+GDATY+ VT   +I +YGINAVCTHLGCVVPWNA+ENKF+C CHGSQY+A GKVVRGPAPLSLALAH   T  K++  EW E DFRTG++PWWA
Sbjct:   80 LAQGLKGDATYIVVTDSKEIANYGINAVCTHLGCVVPWNASENKFMCPCHGSQYNAEGKVVRGPAPLSLALAHANVTDDKLVFSEWTETDFRTGENPWWA 179          
BLAST of mRNA_F-serratus_M_contig112.1106.1 vs. uniprot
Match: A0A8J5X155_DIALT (Rieske domain-containing protein n=3 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5X155_DIALT)

HSP 1 Score: 162 bits (411), Expect = 1.180e-48
Identity = 73/99 (73.74%), Postives = 81/99 (81.82%), Query Frame = 0
Query:    1 LADILQGDATYLSVTSDNKIQDYGINAVCTHLGCVVPWNAAENKFICRCHGSQYDATGKVVRGPAPLSLALAHVEETGGKVILKEWKEADFRTGDSPWW 99
            L + L+GDATYL VT D KI+ Y +NAVCTHLGCVVPWNAA+ KFIC CHGSQYD+TGKVVRGPAPLSLALAHV    GKV+L  W E DFRTG +PWW
Sbjct:  119 LVEGLKGDATYLIVTPDKKIETYALNAVCTHLGCVVPWNAAQQKFICPCHGSQYDSTGKVVRGPAPLSLALAHVNGDSGKVVLSTWTETDFRTGLAPWW 217          
BLAST of mRNA_F-serratus_M_contig112.1106.1 vs. uniprot
Match: Q00GM2_KARBR (Plastid cytochrome b6-f complex iron-sulfur subunit protein n=1 Tax=Karenia brevis TaxID=156230 RepID=Q00GM2_KARBR)

HSP 1 Score: 162 bits (409), Expect = 1.350e-48
Identity = 72/96 (75.00%), Postives = 80/96 (83.33%), Query Frame = 0
Query:    5 LQGDATYLSVTSDNKIQDYGINAVCTHLGCVVPWNAAENKFICRCHGSQYDATGKVVRGPAPLSLALAHVEETG-GKVILKEWKEADFRTGDSPWW 99
            ++GDATYL VT D KI+DY +NAVCTHLGCVVPWN A+NKF+C CHGSQYD TGKVVRGPAPLSLALAHV ++G GKV L  W E DFRTG  PWW
Sbjct:  102 IRGDATYLIVTKDKKIEDYALNAVCTHLGCVVPWNRAQNKFMCPCHGSQYDTTGKVVRGPAPLSLALAHVTDSGNGKVTLTPWTEQDFRTGQDPWW 197          
BLAST of mRNA_F-serratus_M_contig112.1106.1 vs. uniprot
Match: A0A6I5NWI2_9CYAN (Cytochrome b6-f complex iron-sulfur subunit n=1 Tax=Leptolyngbya sp. SIO4C1 TaxID=2607770 RepID=A0A6I5NWI2_9CYAN)

HSP 1 Score: 161 bits (407), Expect = 1.520e-48
Identity = 72/97 (74.23%), Postives = 79/97 (81.44%), Query Frame = 0
Query:    5 LQGDATYLSVTSDNKIQDYGINAVCTHLGCVVPWNAAENKFICRCHGSQYDATGKVVRGPAPLSLALAHVEET-GGKVILKEWKEADFRTGDSPWWA 100
            L+GD TYL VT    + DYGIN+VCTHLGCVVPWN  ENKFIC CHGSQYDATGKVVRGPAPLSLALAH E+T  GKV+L  W E DFRTG +PWW+
Sbjct:   84 LKGDPTYLVVTESGSLGDYGINSVCTHLGCVVPWNGGENKFICPCHGSQYDATGKVVRGPAPLSLALAHAEQTEDGKVVLSPWTETDFRTGAAPWWS 180          
BLAST of mRNA_F-serratus_M_contig112.1106.1 vs. uniprot
Match: A0A7S2V1Z6_9STRA (Plastoquinol--plastocyanin reductase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V1Z6_9STRA)

HSP 1 Score: 163 bits (412), Expect = 3.860e-48
Identity = 71/95 (74.74%), Postives = 79/95 (83.16%), Query Frame = 0
Query:    5 LQGDATYLSVTSDNKIQDYGINAVCTHLGCVVPWNAAENKFICRCHGSQYDATGKVVRGPAPLSLALAHVEETGGKVILKEWKEADFRTGDSPWW 99
            L+GDATYL VT +N I+ YG+NAVCTHLGCVVPWN A NKFIC CHGSQYD+TGKVVRGPAPLSLALAHVE   GK++ + W E DFRTG  PWW
Sbjct:  177 LKGDATYLIVTEENAIESYGLNAVCTHLGCVVPWNKAANKFICPCHGSQYDSTGKVVRGPAPLSLALAHVENDDGKIVFETWTEKDFRTGLDPWW 271          
BLAST of mRNA_F-serratus_M_contig112.1106.1 vs. uniprot
Match: A0A0C1YD37_9CYAN (Cytochrome b6-f complex iron-sulfur subunit n=4 Tax=Cyanobacteria TaxID=1117 RepID=A0A0C1YD37_9CYAN)

HSP 1 Score: 160 bits (404), Expect = 4.350e-48
Identity = 72/97 (74.23%), Postives = 81/97 (83.51%), Query Frame = 0
Query:    5 LQGDATYLSVTSDNKIQDYGINAVCTHLGCVVPWNAAENKFICRCHGSQYDATGKVVRGPAPLSLALAHVEET-GGKVILKEWKEADFRTGDSPWWA 100
            L+GD TYL VT D  ++ YGIN+VCTHLGCVVPWNA+ENKF+C CHGSQYDATGKVVRGPAPLSLALAH + T   KV L +W E DFRTG+SPWWA
Sbjct:   84 LKGDPTYLVVTEDGNLEKYGINSVCTHLGCVVPWNASENKFMCPCHGSQYDATGKVVRGPAPLSLALAHADITEDDKVSLTDWTETDFRTGESPWWA 180          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig112.1106.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FL45_ECTSI8.540e-5579.80Plastoquinol--plastocyanin reductase n=2 Tax=Ectoc... [more]
UCRI_SYNE78.990e-5078.13Cytochrome b6-f complex iron-sulfur subunit n=3 Ta... [more]
A0A846A2U6_9CYAN9.270e-5073.27Cytochrome b6-f complex iron-sulfur subunit n=1 Ta... [more]
UPI001A0E73EF1.040e-4873.00Cytochrome b6-f complex iron-sulfur subunit n=1 Ta... [more]
UPI00168961401.040e-4871.00cytochrome b6-f complex iron-sulfur subunit n=1 Ta... [more]
A0A8J5X155_DIALT1.180e-4873.74Rieske domain-containing protein n=3 Tax=Diacronem... [more]
Q00GM2_KARBR1.350e-4875.00Plastid cytochrome b6-f complex iron-sulfur subuni... [more]
A0A6I5NWI2_9CYAN1.520e-4874.23Cytochrome b6-f complex iron-sulfur subunit n=1 Ta... [more]
A0A7S2V1Z6_9STRA3.860e-4874.74Plastoquinol--plastocyanin reductase n=1 Tax=Fibro... [more]
A0A0C1YD37_9CYAN4.350e-4874.23Cytochrome b6-f complex iron-sulfur subunit n=4 Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005805Rieske iron-sulphur protein, C-terminalPRINTSPR00162RIESKEcoord: 24..35
score: 67.08
coord: 45..57
score: 58.08
coord: 57..69
score: 61.15
IPR036922Rieske [2Fe-2S] iron-sulphur domain superfamilyGENE3D2.102.10.10coord: 1..100
e-value: 3.8E-36
score: 125.4
IPR036922Rieske [2Fe-2S] iron-sulphur domain superfamilySUPERFAMILY50022ISP domaincoord: 7..99
IPR017941Rieske [2Fe-2S] iron-sulphur domainPFAMPF00355Rieskecoord: 17..69
e-value: 5.4E-12
score: 45.5
IPR017941Rieske [2Fe-2S] iron-sulphur domainPROSITEPS51296RIESKEcoord: 1..83
score: 21.74
NoneNo IPR availablePANTHERPTHR10134:SF5CYTOCHROME B6-F COMPLEX IRON-SULFUR SUBUNIT, CHLOROPLASTICcoord: 1..100
IPR014349Rieske iron-sulphur proteinPANTHERPTHR10134CYTOCHROME B-C1 COMPLEX SUBUNIT RIESKE, MITOCHONDRIALcoord: 1..100

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig112contigF-serratus_M_contig112:25418..26433 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig112.1106.1mRNA_F-serratus_M_contig112.1106.1Fucus serratus malemRNAF-serratus_M_contig112 25418..26433 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig112.1106.1 ID=prot_F-serratus_M_contig112.1106.1|Name=mRNA_F-serratus_M_contig112.1106.1|organism=Fucus serratus male|type=polypeptide|length=101bp
LADILQGDATYLSVTSDNKIQDYGINAVCTHLGCVVPWNAAENKFICRCH
GSQYDATGKVVRGPAPLSLALAHVEETGGKVILKEWKEADFRTGDSPWWA
*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005805Rieske_Fe-S_prot_C
IPR036922Rieske_2Fe-2S_sf
IPR017941Rieske_2Fe-2S
IPR014349Rieske_Fe-S_prot