prot_F-serratus_M_contig1117.1088.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1117.1088.1
Unique Nameprot_F-serratus_M_contig1117.1088.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length316
Homology
BLAST of mRNA_F-serratus_M_contig1117.1088.1 vs. uniprot
Match: D8LJM7_ECTSI (C3H1-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJM7_ECTSI)

HSP 1 Score: 439 bits (1130), Expect = 6.570e-151
Identity = 210/312 (67.31%), Postives = 252/312 (80.77%), Query Frame = 0
Query:    1 MWATTDGSTWIEMTTVGLHEWRHVGALQEVGGILYVGYGMPFANCPSVTVDAVRVMDLNGSTAQDVVNVTSGYAHTRRINCVAVVRNAGGDLRLYTGDETGRIVVWAQQASGGAFAQLAQLEGHVRAVTSLLSTASNGMLWSGSEDSNIRIWNTSSNACEHIITWENDGHTTAVVALALGQSAAEGTLKDYVISGSKDGTVGVFQATDGALTYKHKCGDGVSMLAVFDPTPGASALLLIGYEDGTIAVRNFPEFALAFELRPEATHVGHTTPVRSLLPFNNPAVEDSYFLSAAEEGSMICWKVHKLTEASPS 312
            MW+TTDGSTW ++T+V + EWRHVG LQEV G+LYVGYG P+A+   VTVDA+RVMDL   + Q+VV+  +G+AH  RIN + V +  G + R+YTGDE GRI  WA+ + G  FAQLAQLEGH RA+TSL+STASNGMLWS SED  IRIWNT +NAC H IT +N GH   V ALA+GQSAAEGTL +YVISGSKDGT+GVFQA DG LTYKHKCG GVS +A FDPTPG SALLL+GYEDGTIAVRNFPEFALAFE+ P + +VGH+ PV +LLPFNNP+++D YFLSA E+G+M+CW VHKLT+ SP+
Sbjct:  132 MWSTTDGSTWTQVTSVQMTEWRHVGDLQEVEGVLYVGYGTPYAHLADVTVDALRVMDLTSGSTQEVVSSVTGFAHASRINRIMVAK-VGAEPRVYTGDEEGRITAWARPSPGAPFAQLAQLEGHARAITSLVSTASNGMLWSSSEDGTIRIWNTGTNACVHTITKDNGGHEGPVAALAIGQSAAEGTLAEYVISGSKDGTMGVFQAADGGLTYKHKCGTGVSAIAAFDPTPGTSALLLVGYEDGTIAVRNFPEFALAFEIHPTSLYVGHSKPVLALLPFNNPSIDDGYFLSAGEDGTMMCWNVHKLTDPSPA 442          
BLAST of mRNA_F-serratus_M_contig1117.1088.1 vs. uniprot
Match: A0A835YKE1_9STRA (WD40-repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKE1_9STRA)

HSP 1 Score: 156 bits (394), Expect = 5.470e-41
Identity = 119/349 (34.10%), Postives = 164/349 (46.99%), Query Frame = 0
Query:    1 MWATTDGSTWIEMTTVGLHEWRHVGALQEVGGILYVGYGMPFA-----------------------NCPS-------------------VTVDAVRVMDLNGSTAQDVVNVTSG---YAHTRRINCVAVVRNAGGDLRLYTGDETGRIVVWAQQASGGAFAQLAQLEGHVRAVTSLLSTASNGMLWSGSEDSNIRIWNTSSNACEHIITWEND-GHTTAVVALALGQSAAEGTLKDYVISGSKDGTVGVFQATDGALTYKHKCGDGVSMLAVFDPTPGASALLLIGYEDGTIAVRNFPEFALAFELRPEATHVGHTTPVRSLLPFNNPAVEDSYFLSAAEEGSMICWKV 303
            MW T DG+ W E   V L     V +L  V   +   Y  PFA                         P                    +TV  +R+++L G     V  V S    YAHT  INC+A +++A G L L++G + G I  W  Q +G  F     LEGHVR VT L    +  MLWS S+D  +R+W+T++ AC  II      GH  AV  +A G  + EG   +Y+++GS D                      V+ L  F  +P +  LLLIG +DG+IA+R+FP F+LAFEL     +VGH TPVR+LLP   P   + YF+S AE+G M+ W++
Sbjct:   64 MWTTADGAVWNEAAKVDLTPHLSVTSLLVVDPFVACAYEAPFALAAQPXXXXXXXXXXXQQQRGYGGAPGALRGDDAAGALQPPRAERMITVGMIRMLNLRGGEPAAVEVVISDKVPYAHTHPINCLAQLKDAAGALVLFSGGDEGLIRAWKAQGTG--FQLGGVLEGHVRGVTCLCMVGN--MLWSASKDHTVRVWDTATMACLGIIGSTGGLGHKGAVTCMA-GPLSIEGEQGEYMVTGSAD--------------------KSVTALTCFKTSP-SGPLLLIGSDDGSIALRDFPGFSLAFELSAAVLNVGHRTPVRALLPLEIPG-PNLYFMSGAEDGKMMMWQM 385          
BLAST of mRNA_F-serratus_M_contig1117.1088.1 vs. uniprot
Match: A0A6U5LIP5_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A6U5LIP5_9STRA)

HSP 1 Score: 106 bits (264), Expect = 3.790e-22
Identity = 87/292 (29.79%), Postives = 129/292 (44.18%), Query Frame = 0
Query:   24 VGALQEVGGILYVGYGMPFANCPSVTVDAVRVMDLNGST-------AQDVVNVTSGYAHTRRINCVAVVRNAGGDLRLYTGDETGRIVVWAQQASGGAFAQLAQLEGHVRAVTSLLSTASNGMLWSGSEDSNIRIWNTSSNACEHIITWENDGHTTAVVALALGQSAAEGTLKDYVISGSKDGTVGVFQATDGALTYKHKCGDGVSMLAVFDPTPGASALLLIGYEDGTIAVRNFP------EFALAFELRPEATHVGHTTPVRSLLPFNNPAVEDSYFLSAAEEGSMICWK 302
            VGAL     +L+ G+       P V V ++   +L  +        A+D  +    YAH R +  +  V +  G + + +  E G I VW      G F     L GH RAV+ L    S G+LWSGSED +IR+W+ S  +C  +I   ++GH+  V +L    S   G    +V S S DGT+  +    G +      GDGV M  V       + LL+ G E G I VR+ P         L  +L  + T      PVR +     PA     F S+ ++G ++ W+
Sbjct:  163 VGALVVSNNLLFCGFEKECPLLPGVKVGSIHAWNLQNAASPPQEFHAED--SAVHPYAHGRIVTSLLPVPDGAGGVAVVSSSEDGLIRVWRFDTGTGKFMVFRSLMGHARAVSGL--AYSEGLLWSGSEDHSIRMWDMSKGSCGKVIAGGSEGHSGPVTSLLAWGSEKLGA---FVFSSSLDGTIKAWDPA-GKMLKMESHGDGV-MTIVTTTDEAGNPLLVCGLERGNIMVRSLPGAGDLPALTLLIKLSDQYTCSHTNGPVRCVQAGAGPA---GIFYSSGDDGKLMVWQ 442          
BLAST of mRNA_F-serratus_M_contig1117.1088.1 vs. uniprot
Match: A0A7S2E980_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2E980_9STRA)

HSP 1 Score: 96.7 bits (239), Expect = 8.660e-19
Identity = 99/335 (29.55%), Postives = 138/335 (41.19%), Query Frame = 0
Query:    1 MWATTDGSTWIEMTTVGLHEWRHVGALQEV---GGILYVGYGMPFANCPSVTVDAVRVMDLNGSTAQDVVNVTSGYAHTRRINCVAVVRNAGGDLRLYTGDETGRIVVWAQQAS----GGAFAQLAQLEGHVRAVTSLLSTASNGMLWSGSEDSNIRIWNTSSNACEHIITWENDG-------------------HTTAVVALALGQSAAEGTLKDYVISGSKDGTVGVFQATDGALTYKHKCGDGVSMLAVFDPTPGASALLLIGYEDGTIAVR------NFPEFALAFELRPEATHVGHTTPVRSLLPFNNPAVEDSYFLSAAEEGSMICWKV 303
            +W T  G      T V   E R  G ++ V      L+VG+       P V V  V   +L   T   +       A      C+    N+G  +   +G   G I +WA  A+     G FA    L GH   VT L +     MLWSGS DS IR+W+ +S  C+++IT E  G                   HT  V  L   +S A     ++VIS S DGTV  +  ++G        G GV  +A+ +   G + +LL G E G I +R      N P   L F L  + T  GH  PVR+L     PA   + F S   +G +  W++
Sbjct:  124 LWNTAQG------TFVKEFEHRMGGKVETVDVASNFLFVGFEGTTVKVPGVRVGMVHAWNLAVPTDPPIEFQMDPLAPYSAAGCITSFLNSGDTM--VSGSHDGTIRIWAYDAAVGGGKGGFALRHTLHGHAGEVTGL-AVVGGTMLWSGSTDSTIRLWDMASGECKYLITKETPGTIPPPQQPQAQQQNPQGVGHTGPVTHLVPFESPAG----NFVISSSLDGTVKAWNGSNGDCVASETHGQGVVTIALTNDLKG-NPILLCGLEAGNIMIRSILPSPNAPALCLLFTLSAKYT-AGHEGPVRALRA--GPA---NTFYSGGSDGKLNVWEI 438          
BLAST of mRNA_F-serratus_M_contig1117.1088.1 vs. uniprot
Match: A0A7S3HF87_9STRA (Hypothetical protein n=2 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HF87_9STRA)

HSP 1 Score: 95.1 bits (235), Expect = 2.720e-18
Identity = 75/227 (33.04%), Postives = 111/227 (48.90%), Query Frame = 0
Query:   79 INCVAVVRNAGGDLRLYTGDETGRIVVWAQQASGGAFAQLAQLEGHVRAVTSLLSTASNGMLWSGSEDSNIRIWNTSSNACEHIITWENDG--HTTAVVALALGQSAAEGTLKDYVISGSKDGTVGVFQATDGALTYKHKCGDGVSMLAVFDPTPGASALLLIGYEDGTIAVRNFPEFALAFELRPEATHVGHTTPVRSLLPFNNPAVEDSYFLSAAEEGSMICWKV 303
            I+ V  V  AGG+         G I  W   AS G F Q+  LEGH+RAVT++L   +  +LWSGS DS +R+W+ +S  C   +   N G  HT AV  L    +      + ++ SG+ D  V ++  T G+L +    G  V+ L  F  T G   +LLIG  DGTI VR+     + F L      + HT  + S++         S F + +++G ++ WKV
Sbjct:  220 IDGVTFVITAGGE---------GLIRTWRFDASKGGFEQIMVLEGHIRAVTTVLLNGA--LLWSGSVDSTLRVWDLASGKCLATLAAANGGPGHTQAVTCLEFVPNTGA---EPFIASGAADNAVKLW-GTTGSLLHTVTHGAMVTSLKAFKDTLGGIQVLLIGLLDGTIHVRSCMSMKILFTLD---ASICHTKAIWSIVDLGQ-----SCFGAGSDDGQIVVWKV 423          
BLAST of mRNA_F-serratus_M_contig1117.1088.1 vs. uniprot
Match: A0A834WL21_9FABA (Zinc finger CCCH domain-containing protein 48 n=1 Tax=Senna tora TaxID=362788 RepID=A0A834WL21_9FABA)

HSP 1 Score: 58.5 bits (140), Expect = 5.620e-6
Identity = 51/192 (26.56%), Postives = 81/192 (42.19%), Query Frame = 0
Query:   68 NVTSGYAHTRRINCVAVVRNAGGDLRLYTGDETGRIVVWAQQASGGA-FAQLAQLEGHVRAVTSLLSTASNGMLWSGSEDSNIRIWNTSSNACEHIITWENDGHTTAVVALALGQSAAEGTLKDYVISGSKDGTVGVFQATDGA---LTYKHKCGDGVSMLAVFDPTPGASALLLIGYEDGTIAVRNFPEFA 255
            N+ +   HT       V+  A G   LY   E G I VW   +   + F  +  L GH +AV SL   A + +L+SGS D +I++W+  +  C   +    D  T+ +                Y++S S DGT+ V+ ATD     + Y H    GV  +       G   +L    +D ++ +   P F+
Sbjct:  196 NIETNVQHTLNGPKGQVLAMAAGTNTLYGAAEDGAIYVWKNTSEAQSPFEPVVSLIGHTKAVVSLAFGADHKILFSGSMDHSIKVWDLDTLQCTMTLKAHKDMVTSLIC------------WGPYLLSSSLDGTIKVWGATDAKTFEVIYTHNEEHGVIAINGTSDLEG-KPILFSSRKDNSVGIYEIPSFS 374          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1117.1088.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D8LJM7_ECTSI6.570e-15167.31C3H1-type domain-containing protein n=2 Tax=Ectoca... [more]
A0A835YKE1_9STRA5.470e-4134.10WD40-repeat-containing domain protein n=1 Tax=Trib... [more]
A0A6U5LIP5_9STRA3.790e-2229.79Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
A0A7S2E980_9STRA8.660e-1929.55Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7S3HF87_9STRA2.720e-1833.04Hypothetical protein n=2 Tax=Spumella elongata Tax... [more]
A0A834WL21_9FABA5.620e-626.56Zinc finger CCCH domain-containing protein 48 n=1 ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 65..107
e-value: 2.9
score: 14.1
coord: 259..302
e-value: 62.0
score: 5.7
coord: 114..153
e-value: 3.0E-4
score: 30.1
coord: 156..205
e-value: 1.7
score: 15.5
IPR001680WD40 repeatPFAMPF00400WD40coord: 118..153
e-value: 0.0064
score: 17.3
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 121..162
score: 12.981
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 48..313
e-value: 3.4E-30
score: 106.8
NoneNo IPR availablePANTHERPTHR44489FAMILY NOT NAMEDcoord: 71..308
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 140..154
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 72..214
score: 15.742
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 73..305

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1117contigF-serratus_M_contig1117:213025..218108 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1117.1088.1mRNA_F-serratus_M_contig1117.1088.1Fucus serratus malemRNAF-serratus_M_contig1117 212491..222228 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1117.1088.1 ID=prot_F-serratus_M_contig1117.1088.1|Name=mRNA_F-serratus_M_contig1117.1088.1|organism=Fucus serratus male|type=polypeptide|length=316bp
MWATTDGSTWIEMTTVGLHEWRHVGALQEVGGILYVGYGMPFANCPSVTV
DAVRVMDLNGSTAQDVVNVTSGYAHTRRINCVAVVRNAGGDLRLYTGDET
GRIVVWAQQASGGAFAQLAQLEGHVRAVTSLLSTASNGMLWSGSEDSNIR
IWNTSSNACEHIITWENDGHTTAVVALALGQSAAEGTLKDYVISGSKDGT
VGVFQATDGALTYKHKCGDGVSMLAVFDPTPGASALLLIGYEDGTIAVRN
FPEFALAFELRPEATHVGHTTPVRSLLPFNNPAVEDSYFLSAAEEGSMIC
WKVHKLTEASPSPRS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR019775WD40_repeat_CS
IPR017986WD40_repeat_dom
IPR036322WD40_repeat_dom_sf