prot_F-serratus_M_contig11.926.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_F-serratus_M_contig11.926.1
Unique Name	prot_F-serratus_M_contig11.926.1
Type	polypeptide
Organism	Fucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length	213

Homology

[Close]

BLAST of mRNA_F-serratus_M_contig11.926.1 vs. uniprot
Match: D7G1G0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1G0_ECTSI)

HSP 1 Score: 126 bits (316), Expect = 8.560e-30
Identity = 92/218 (42.20%), Postives = 117/218 (53.67%), Query Frame = 0

Query:    9 SISSRLLSGERLMVGGVTDPPPDDVEKLARAAGAEITHSLREATVLLVGSENELQEWVDGEK---AAATAYHPSSKKRKAEGTVRGHG-------RNLAPSTASSRNISLLSRGGGGGDGEAGGPVVFDETFCGKRIKRGLAEVGAASGGGCWGQEEDDALCALKSADSVVRLQWFFDSVERGVVVDRGDFL----AKSEEGAAGNATDLEDAGSQEW 212
            SISS LL GER+M+GG+ DPPP  VE LA A G +ITH L +AT+LL  +E  L+ WV+ +K   A+      S  +  ++ + R  G       R L  STASSRN S          G AGG          +R   G  +  AA+G G WG+EE+ AL  L     VVRL W FDSVE+GV VD+ +FL      S+ GA G+AT      SQEW
Sbjct: 1732 SISSSLLQGERVMLGGIADPPPSVVETLALATGGQITHCLHDATLLLAETETALEAWVEQQKKPEASXXXXXXSGSRGVSKISARPGGNSIGTGRRGLGASTASSRNASR---------GAAGG----------RRGVLGKGKGSAAAGPGGWGEEEESALKGLAEKLGVVRLPWLFDSVEKGVRVDKENFLIMAEGTSQSGAEGDAT-----ASQEW 1925

[Close]

BLAST of mRNA_F-serratus_M_contig11.926.1 vs. uniprot
Match: A0A6H5JHC6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHC6_9PHAE)

HSP 1 Score: 119 bits (298), Expect = 2.210e-27
Identity = 87/215 (40.47%), Postives = 110/215 (51.16%), Query Frame = 0

Query:    9 SISSRLLSGERLMVGGVTDPPPDDVEKLARAAGAEITHSLREATVLLVGSENELQEWVDGEKAAATAYHPSSKKRKAEGTVR---GHG--------RNLAPSTASSRNISLLSRGGGGGDGEAGGPVVFDETFCGKRIKRGLAEVGAASGGGCWGQEEDDALCALKSADSVVRLQWFFDSVERGVVVDRGDFLAKSEEGAAGNATDLEDAGSQEW 212
            SISS LL GER+M+GG+ DPPP  VE LA A G  ITH + +AT+LL  +E  L+ WV+ +               + G  +   G G        R L  STASSRN S          G AGG          +R   G  +  AA+G G WG+EE+ AL  L     VVRL W FDSVE+GV VD+ +FL  +E  A  N  + + A SQEW
Sbjct: 1982 SISSNLLQGERVMLGGIVDPPPSVVENLAVATGGLITHCIHDATLLLAETEIALEAWVEQQXXXXXXXXXXXXXXXSRGVAKISAGPGGNSIGTSRRGLGASTASSRNASR---------GAAGG----------RRGVLGKGKGRAAAGPGGWGEEEESALKVLAEKLGVVRLPWLFDSVEKGVRVDKENFLVMAER-APQNGAEGDAAASQEW 2176

The following BLAST results are available for this feature:

BLAST of mRNA_F-serratus_M_contig11.926.1 vs. uniprot

BLAST of mRNA_F-serratus_M_contig11.926.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D7G1G0_ECTSI	8.560e-30	42.20	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5JHC6_9PHAE	2.210e-27	40.47	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036420	BRCT domain superfamily	SUPERFAMILY	52113	BRCT domain	coord: 14..193

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
F-serratus_M_contig11	contig	F-serratus_M_contig11:1057679..1060080 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Fucus serratus MALE	2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90	2022-09-16
OGS1.0 of Fucus serratus male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_F-serratus_M_contig11.926.1	mRNA_F-serratus_M_contig11.926.1	Fucus serratus male	mRNA	F-serratus_M_contig11 1055547..1061221 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_F-serratus_M_contig11.926.1 ID=prot_F-serratus_M_contig11.926.1|Name=mRNA_F-serratus_M_contig11.926.1|organism=Fucus serratus male|type=polypeptide|length=213bp
MGNAEGLHSISSRLLSGERLMVGGVTDPPPDDVEKLARAAGAEITHSLRE
ATVLLVGSENELQEWVDGEKAAATAYHPSSKKRKAEGTVRGHGRNLAPST
ASSRNISLLSRGGGGGDGEAGGPVVFDETFCGKRIKRGLAEVGAASGGGC
WGQEEDDALCALKSADSVVRLQWFFDSVERGVVVDRGDFLAKSEEGAAGN
ATDLEDAGSQEW*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR036420	BRCT_dom_sf