prot_F-serratus_M_contig11.921.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig11.921.1
Unique Nameprot_F-serratus_M_contig11.921.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length258
Homology
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BLAST of mRNA_F-serratus_M_contig11.921.1 vs. uniprot
Match: D7G1K8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1K8_ECTSI)

HSP 1 Score: 229 bits (583), Expect = 7.790e-71
Identity = 149/317 (47.00%), Postives = 183/317 (57.73%), Query Frame = 0 
Query:    1 MRSDVSTFILG--LAICGVTSAAPTYSCFDSPTVEGQTSPLGASMYHLPEAECCEALIDESDILAGRLVVLDEINCNHGPDETAIAEAFLCYAYDTDGCRFCYLSCDGFEDSCILCSDVFSGAI---SPTPVPVAGTTKSPLDTLAP--LDISTEVP------------------------------------------------------TXXXXXXXXXXXXXXXXXXXXXXXXXXXECLENITDTEAEVLTIRGKTLRCDPTCSNDEDLVWGVINCNYFGLGQDCRTCADSCEEQSGGIWLDQYLALCKPCAAI 256
            MRSD++T I    L++C V SAAPTYSCFD P  EGQT+PLG  M  + E+ECCEALIDESD++A R V+ D +NCNHGP +  IAEA+LC A+DTDGCRFC+ SCDG+E  CI C +V    +   SPTP P   T++ P  T AP  L  +TE P                                                       XXXXXXXXXXXXXXXX           EC+ ++++ E  VLT R K + CDPTCS+  DLVWGV+NCNYF LGQ+CR C+D C++Q  G WLDQ    CKPC+AI
Sbjct:    1 MRSDIATVIAFGLLSVCPV-SAAPTYSCFDPPD-EGQTNPLGEGMEDVVESECCEALIDESDMMADREVIWDPVNCNHGPGDEPIAEAYLCRAHDTDGCRFCHDSCDGYEGLCITCEEVLEDLLNSDSPTPSPDFETSEFPA-TPAPAILTAATEAPFGIFPATPAPVAPVXXPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPAPTAEASDCECVNSLSEEEMAVLTRRSKNMVCDPTCSDQSDLVWGVMNCNYFALGQNCRACSDLCDDQGDGTWLDQDGFPCKPCSAI 314
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig11.921.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G1K8_ECTSI7.790e-7147.00Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 5..15
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..20
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 21..257
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..4
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..20
score: 0.776

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig11contigF-serratus_M_contig11:842286..851082 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig11.921.1mRNA_F-serratus_M_contig11.921.1Fucus serratus malemRNAF-serratus_M_contig11 842228..851262 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig11.921.1 ID=prot_F-serratus_M_contig11.921.1|Name=mRNA_F-serratus_M_contig11.921.1|organism=Fucus serratus male|type=polypeptide|length=258bp
MRSDVSTFILGLAICGVTSAAPTYSCFDSPTVEGQTSPLGASMYHLPEAE
CCEALIDESDILAGRLVVLDEINCNHGPDETAIAEAFLCYAYDTDGCRFC
YLSCDGFEDSCILCSDVFSGAISPTPVPVAGTTKSPLDTLAPLDISTEVP
TPTPTSTRSPTPATTPAPVVGDDDDNDCECLENITDTEAEVLTIRGKTLR
CDPTCSNDEDLVWGVINCNYFGLGQDCRTCADSCEEQSGGIWLDQYLALC
KPCAAIP*
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