prot_F-serratus_M_contig11.907.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig11.907.1
Unique Nameprot_F-serratus_M_contig11.907.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length239
Homology
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BLAST of mRNA_F-serratus_M_contig11.907.1 vs. uniprot
Match: D7G1F2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1F2_ECTSI)

HSP 1 Score: 149 bits (376), Expect = 1.950e-40
Identity = 103/239 (43.10%), Postives = 140/239 (58.58%), Query Frame = 0 
Query:    1 MSSTLGVLDVLSRLRDESERASTALIAQQDANRGMIERCRQAEEESGRTGPLCGQLRKRRALLEEDLRCSETRKQDAQGRLRRLQKENARRENAAAQKREAARTTADRAIESSQKFRSDTSARLRQIGELRARLREKTGELERIQDQTKELDDEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQTQEEMQEIALGLRNKNAVLRNELRNLKRAI 239
            M+STLGVLDVLS+LR+ESERASTAL AQQ+ NR ++++C +AE ESGRT      L+ R+  LE+    +ET +++A+GRLRRLQ + ARR+ AAA+ RE        A+  S++FR+D   R+RQIGELRARLR+K GELE  ++  +ELD E                                                      + QEEMQE+A+GL+ KNA+LR+ELR+LKR +
Sbjct:    1 MASTLGVLDVLSKLREESERASTALTAQQETNRTLLQKCIEAETESGRTDEAKEALQLRKVQLEQGHEDAETGRREAEGRLRRLQMQQARRKQAAARMRENTTAAGASAVAISKRFRADAFDRVRQIGELRARLRDKRGELESAEEDKRELDVEISNKKATRDTVKAEVTSQLEAVALSCSKVDDIDRENKSLLARAKRVEGEIDEIREAQEEMQEMAVGLQRKNAILRHELRHLKREL 239
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig11.907.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G1F2_ECTSI1.950e-4043.10Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 127..154
NoneNo IPR availableCOILSCoilCoilcoord: 67..104
NoneNo IPR availableCOILSCoilCoilcoord: 183..238

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig11contigF-serratus_M_contig11:278429..287524 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig11.907.1mRNA_F-serratus_M_contig11.907.1Fucus serratus malemRNAF-serratus_M_contig11 278429..287524 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig11.907.1 ID=prot_F-serratus_M_contig11.907.1|Name=mRNA_F-serratus_M_contig11.907.1|organism=Fucus serratus male|type=polypeptide|length=239bp
MSSTLGVLDVLSRLRDESERASTALIAQQDANRGMIERCRQAEEESGRTG
PLCGQLRKRRALLEEDLRCSETRKQDAQGRLRRLQKENARRENAAAQKRE
AARTTADRAIESSQKFRSDTSARLRQIGELRARLREKTGELERIQDQTKE
LDDEVSAKMASTNKVKAEVQSRRGALAAAASAAHDIEQENRAMLSRARHV
EKEIDEVRQTQEEMQEIALGLRNKNAVLRNELRNLKRAI
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