prot_F-serratus_M_contig1084.786.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1084.786.1
Unique Nameprot_F-serratus_M_contig1084.786.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length330
Homology
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BLAST of mRNA_F-serratus_M_contig1084.786.1 vs. uniprot
Match: D7G1Y8_ECTSI (Similar to mitochondrial import inner membrane translocase,TIM17/22/23-like protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1Y8_ECTSI)

HSP 1 Score: 273 bits (697), Expect = 6.880e-87
Identity = 165/316 (52.22%), Postives = 214/316 (67.72%), Query Frame = 0 
Query:   21 MGWFGLGKRENEAREGVFETGGDSSDIAGVAPDTTAEAAPVWGVVTGATGES----EEPIKA-----EAPVVVM------PESPLDKELDAEPFETSSARTPGYLARLKVAVSDSFETAKGAPATLDEAVAVLRGERDVKPDFERATSTVSAAFAGGCIHGWMRSASLAARYPRHQRSIVRVRSGAGKGLSFAMFALIFEGSSAALEALRQKQDMWGGVVGGGLAGMAYGVSGGVASARRGLFNGVWLGGLFGMFRNHVASLREEARLAAEDDRMAQEEKDERGKTSLKKSIKGLEAQLETWPATQESTAEQEPTT 321
            MGWFGLG+R+  A E    +   S+D   ++    A+AA      + +TG S     EP+ A      AP   M        SP++++ + +  E  +  +PGY  RLK A  D+  TAK AP T++EA+AV++GER VKPD+ RA  TVSAAFAGGC HGW   A+LAA+YP HQRSIVRVR+GA +GL FA FALIFEGSSA +EALR+K+D  GG VGG LAGMAYG     A+AR GLF GVWLGG+FG+FRNHVASLRE+ARLA ED+R+AQEE+D  G+T+L++SI G++AQ+ TWP     + ++  TT
Sbjct:    1 MGWFGLGRRK-PADESSPSSPTLSTDGINMSTGCGAQAA------SESTGRSCTPMAEPVGAPKTTLNAPAAAMRADACDKASPVEEQQEQQQGEGVADSSPGYAHRLKAAFLDTVATAKRAPETMEEAMAVIKGERAVKPDYGRAVGTVSAAFAGGCAHGWWHGAALAAKYPPHQRSIVRVRAGARRGLRFATFALIFEGSSAVMEALRRKKDFVGGTVGGALAGMAYGXXXXXAAARSGLFYGVWLGGVFGLFRNHVASLREQARLAEEDERLAQEERDAIGETALRRSIAGIDAQVRTWPTAAADSEDETDTT 309
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1084.786.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G1Y8_ECTSI6.880e-8752.22Similar to mitochondrial import inner membrane tra... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF02466Tim17coord: 152..244
e-value: 6.8E-9
score: 36.1

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1084contigF-serratus_M_contig1084:112076..120138 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1084.786.1mRNA_F-serratus_M_contig1084.786.1Fucus serratus malemRNAF-serratus_M_contig1084 111384..120141 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1084.786.1 ID=prot_F-serratus_M_contig1084.786.1|Name=mRNA_F-serratus_M_contig1084.786.1|organism=Fucus serratus male|type=polypeptide|length=330bp
MVIVSRRASCSSAGLLSTTTMGWFGLGKRENEAREGVFETGGDSSDIAGV
APDTTAEAAPVWGVVTGATGESEEPIKAEAPVVVMPESPLDKELDAEPFE
TSSARTPGYLARLKVAVSDSFETAKGAPATLDEAVAVLRGERDVKPDFER
ATSTVSAAFAGGCIHGWMRSASLAARYPRHQRSIVRVRSGAGKGLSFAMF
ALIFEGSSAALEALRQKQDMWGGVVGGGLAGMAYGVSGGVASARRGLFNG
VWLGGLFGMFRNHVASLREEARLAAEDDRMAQEEKDERGKTSLKKSIKGL
EAQLETWPATQESTAEQEPTTPRRDQQES*
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