prot_F-serratus_M_contig1075.739.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_F-serratus_M_contig1075.739.1
Unique Name	prot_F-serratus_M_contig1075.739.1
Type	polypeptide
Organism	Fucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length	289

Homology

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BLAST of mRNA_F-serratus_M_contig1075.739.1 vs. uniprot
Match: D7FLU9_ECTSI (C6 transcription factor Prf n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLU9_ECTSI)

HSP 1 Score: 79.7 bits (195), Expect = 4.830e-13
Identity = 52/123 (42.28%), Postives = 62/123 (50.41%), Query Frame = 0

Query:    1 MNLLLLPQETPGSSIAPMEIPLQSALALPAVTLPVG---TPERRTVIGGPDAGEGPTRNQFPLKTTTGFVRTPSKLRRSCDRCTMRKIRCDGSGVMCKRCESDGQACHYSLKAKSGPKPQGAR 120
            +NLLLL QE   ++  P           P+   PV    TP  R+  G  + G G      P          P  LR SCDRCTMRKI+CDG    C+RC+ D Q CHYSLK+KSGPKP   R
Sbjct:  366 LNLLLLSQELQEAAGTPR----------PSAGAPVSSTKTPAERS--GSSENGRGRDAGSKPAG--------PKPLRTSCDRCTMRKIKCDGREGKCQRCDRDNQFCHYSLKSKSGPKPNSIR 468

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BLAST of mRNA_F-serratus_M_contig1075.739.1 vs. uniprot
Match: A0A6H5L603_9PHAE (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L603_9PHAE)

HSP 1 Score: 72.4 bits (176), Expect = 1.480e-10
Identity = 35/57 (61.40%), Postives = 41/57 (71.93%), Query Frame = 0

Query:   76 SCDRCTMRKIRCDGSGVMCKRCESDGQACHYSLKAKSGPKPQGARNLAISPVSDGKE 132
            SCDRCTMRKI+CDG    C+RC+ D Q CHYSLK+KSGPKP   R  + SP S  +E
Sbjct:  474 SCDRCTMRKIKCDGREGKCQRCDRDNQFCHYSLKSKSGPKPNSIRRKS-SPRSPREE 529

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BLAST of mRNA_F-serratus_M_contig1075.739.1 vs. uniprot
Match: K8YU74_NANGC (Tpa: zn 2cys6 transcription factor n=3 Tax=Monodopsidaceae TaxID=425072 RepID=K8YU74_NANGC)

HSP 1 Score: 60.1 bits (144), Expect = 1.700e-6
Identity = 28/48 (58.33%), Postives = 34/48 (70.83%), Query Frame = 0

Query:   68 RTPSKLRRSCDRCTMRKIRCDGSGVMCKRCESDGQACHYSLKAKSGPK 115
            R+  KLRRSCDRCT +KIRCDG    C+ C   G ACHYS + ++GPK
Sbjct:    7 RSRKKLRRSCDRCTSKKIRCDGLAA-CQNCVRRGYACHYSERRRTGPK 53

The following BLAST results are available for this feature:

BLAST of mRNA_F-serratus_M_contig1075.739.1 vs. uniprot

BLAST of mRNA_F-serratus_M_contig1075.739.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 3


Match Name	E-value	Identity	Description
D7FLU9_ECTSI	4.830e-13	42.28	C6 transcription factor Prf n=1 Tax=Ectocarpus sil...	[more]
A0A6H5L603_9PHAE	1.480e-10	61.40	Zn(2)-C6 fungal-type domain-containing protein n=1...	[more]
K8YU74_NANGC	1.700e-6	58.33	Tpa: zn 2cys6 transcription factor n=3 Tax=Monodop...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 213..233
None	No IPR available	PANTHER	PTHR31668	FAMILY NOT NAMED	coord: 65..212
IPR001138	Zn(2)-C6 fungal-type DNA-binding domain	SMART	SM00066	gal4_2	coord: 71..115 e-value: 2.5E-6 score: 37.0
IPR001138	Zn(2)-C6 fungal-type DNA-binding domain	PFAM	PF00172	Zn_clus	coord: 75..111 e-value: 1.1E-5 score: 25.4
IPR001138	Zn(2)-C6 fungal-type DNA-binding domain	PROSITE	PS00463	ZN2_CY6_FUNGAL_1	coord: 76..104
IPR001138	Zn(2)-C6 fungal-type DNA-binding domain	PROSITE	PS50048	ZN2_CY6_FUNGAL_2	coord: 76..106 score: 9.226
IPR036864	Zn(2)-C6 fungal-type DNA-binding domain superfamily	GENE3D	4.10.240.10		coord: 68..124 e-value: 6.1E-10 score: 40.9
IPR036864	Zn(2)-C6 fungal-type DNA-binding domain superfamily	SUPERFAMILY	57701	Zn2/Cys6 DNA-binding domain	coord: 70..111

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
F-serratus_M_contig1075	contig	F-serratus_M_contig1075:214729..217917 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Fucus serratus MALE	2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90	2022-09-16
OGS1.0 of Fucus serratus male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_F-serratus_M_contig1075.739.1	mRNA_F-serratus_M_contig1075.739.1	Fucus serratus male	mRNA	F-serratus_M_contig1075 213596..218015 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_F-serratus_M_contig1075.739.1 ID=prot_F-serratus_M_contig1075.739.1|Name=mRNA_F-serratus_M_contig1075.739.1|organism=Fucus serratus male|type=polypeptide|length=289bp
MNLLLLPQETPGSSIAPMEIPLQSALALPAVTLPVGTPERRTVIGGPDAG
EGPTRNQFPLKTTTGFVRTPSKLRRSCDRCTMRKIRCDGSGVMCKRCESD
GQACHYSLKAKSGPKPQGARNLAISPVSDGKEGAAGAAGFPRPDQNGTPA
DSAEASSSAGREIKSTDAGTPWLPAGVTPVATFSPVEAHSQAPAPMETDP
VHDLTFSMVGRTMEELEREQDQAAEVAAVAEQTIAAAASTGTTAGNSVEV
EKKDGARMSETGAAFRLAGSAEGSDGRGHDGQVVAPCL*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001138	Zn2-C6_fun-type_DNA-bd
IPR036864	Zn2-C6_fun-type_DNA-bd_sf