prot_F-serratus_M_contig1075.727.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1075.727.1
Unique Nameprot_F-serratus_M_contig1075.727.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length180
Homology
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BLAST of mRNA_F-serratus_M_contig1075.727.1 vs. uniprot
Match: D7FLT7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLT7_ECTSI)

HSP 1 Score: 175 bits (443), Expect = 9.530e-53
Identity = 107/180 (59.44%), Postives = 126/180 (70.00%), Query Frame = 0 
Query:    1 MRLLATAVALVVPCLTHGFTP--TIPSLQIAPRSSLPLRCPSCRFNTIMNNLDSTHAKIKVAGTVLLGGALLATGLVDSAGVARADVSISPRCITGEGANCDDLAEGIELIKSLQAKSVLSKDKFFKETLEKYNEHNFKDYFRAENKHMVRHKDGRYEILTNEDYAEAEKAGKVKKDVFL 178
            MRL     ALV P     F    T PS   +P S+  LRC S R    M  L +     +  G VL+GGAL+ TG +D   VARADVSISPRCITGEGA C+DLAEG ELIKSLQAKS +SKD++F+ETL+ YN HNFKDYF+AE+KHMV+H  G+YEILTN +YA AEKAGKV+ DVFL
Sbjct:    1 MRLHVILAALVGPSCVESFAVLCTAPSSSTSPVSTS-LRCRSTRT---MMTLPTAGDLNRALGAVLVGGALI-TGAMD---VARADVSISPRCITGEGAQCEDLAEGNELIKSLQAKSAISKDRYFQETLDTYNVHNFKDYFKAESKHMVKHNTGKYEILTNAEYAAAEKAGKVRNDVFL 172
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BLAST of mRNA_F-serratus_M_contig1075.727.1 vs. uniprot
Match: A0A835ZAV3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAV3_9STRA)

HSP 1 Score: 70.9 bits (172), Expect = 3.290e-12
Identity = 46/123 (37.40%), Postives = 68/123 (55.28%), Query Frame = 0 
Query:   60 AGTVLLGGALLATGLV----DSAGVARADVSISPRCITGEGANCDDLAEGIELIKSLQAKSVLSKDKFFKETLEKYNEHNFKDYFRAENKHMVRHKDGRYEILTNEDYAEAEKAGKVKKDVFL 178
            AG+VL   A+LA   +    D   + R ++     C  G G  C   AEG +LI+ LQ +S   + +  ++ LE YNEHNF DYF+  NK MVR    +Y +++  +YA AEKAG V  + ++
Sbjct:   45 AGSVLASAAVLAAPQLVLADDRPSILRQEI-----CEVGVGDGCAQAAEGSDLIRKLQQRSAERRAEREQQMLETYNEHNFADYFKTLNKRMVRKGPNQYVLMSETEYAAAEKAGLVYDNKYI 162
[Close]
BLAST of mRNA_F-serratus_M_contig1075.727.1 vs. uniprot
Match: A0A1Z5KK89_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KK89_FISSO)

HSP 1 Score: 60.1 bits (144), Expect = 3.410e-8
Identity = 37/107 (34.58%), Postives = 61/107 (57.01%), Query Frame = 0 
Query:   70 LATGLVDSAGVARADVSISPRCITGEGANCDDLAEGIELIKSLQAKSVLSKDKFFKETLEKYNEHNFKDYFRAENKHMVRHKDGRYEILTNEDYAEAEKAGKVKKDV 176
            L    V S+  A A +S S  C  G G  C DL+EG ELI+SLQ KS ++++++ +E L+ Y   N+ D+F    K +V+  DG +  L + +  + ++ GKV  ++
Sbjct:   31 LVGAFVASSSPAEAVIS-SKYCSAGVGEGCGDLSEGNELIRSLQEKSAINRERYQQEALDAYYMKNYPDFFGVVGKTLVKKPDGTFVALADSEVEKLKQEGKVTFEI 136
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1075.727.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FLT7_ECTSI9.530e-5359.44Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835ZAV3_9STRA3.290e-1237.40Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A1Z5KK89_FISSO3.410e-834.58Uncharacterized protein n=2 Tax=Fistulifera solari... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..18
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 19..179
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..18
score: 0.692

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1075contigF-serratus_M_contig1075:72836..76559 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1075.727.1mRNA_F-serratus_M_contig1075.727.1Fucus serratus malemRNAF-serratus_M_contig1075 72836..76559 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1075.727.1 ID=prot_F-serratus_M_contig1075.727.1|Name=mRNA_F-serratus_M_contig1075.727.1|organism=Fucus serratus male|type=polypeptide|length=180bp
MRLLATAVALVVPCLTHGFTPTIPSLQIAPRSSLPLRCPSCRFNTIMNNL
DSTHAKIKVAGTVLLGGALLATGLVDSAGVARADVSISPRCITGEGANCD
DLAEGIELIKSLQAKSVLSKDKFFKETLEKYNEHNFKDYFRAENKHMVRH
KDGRYEILTNEDYAEAEKAGKVKKDVFLE*
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