prot_F-serratus_M_contig1074.718.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1074.718.1
Unique Nameprot_F-serratus_M_contig1074.718.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length448
Homology
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BLAST of mRNA_F-serratus_M_contig1074.718.1 vs. uniprot
Match: D7FX91_ECTSI (DUF4485 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX91_ECTSI)

HSP 1 Score: 185 bits (469), Expect = 6.440e-50
Identity = 99/171 (57.89%), Postives = 122/171 (71.35%), Query Frame = 0 
Query:   20 RSNSAHPTFDSLDEAFCDSLERIESSYDTLERALK-IRVEAWVVKLNGPHPLPSVAWRKNRNAFAALLARAIEEVDFREPFDKRPPEGSLPTLAPHLRLRIPDRSSSLGRGRTFWGQQRDRLDNVRGRCAGP-SEIATDPPRTFQRERWHGWN-TSAAPTYSSRRVLDGGN 187
            R+N+AHP+++SLD  FC  LER+E++Y TL +A K IRVE W+ KLNGP+PLP+VAWRKNRNAFAALLARA+EEVDFREPFD+RPPEGSLPTLAPHLR RIPDR+     G  FW + R  LD  RG      +  A +  RTFQ  R    + TS  P ++S  +  GG+
Sbjct:   22 RNNAAHPSYESLDAFFCGCLERVEAAYATLNKAFKKIRVECWIAKLNGPYPLPNVAWRKNRNAFAALLARAVEEVDFREPFDRRPPEGSLPTLAPHLRARIPDRNPFQRTGSDFWLRHRAWLDTSRGLSGRDFANEAAEASRTFQPTRRGSPSPTSQDPRFASPGLQGGGH 192
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BLAST of mRNA_F-serratus_M_contig1074.718.1 vs. uniprot
Match: A0A0L0DHD2_THETB (DUF4485 domain-containing protein n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0DHD2_THETB)

HSP 1 Score: 54.7 bits (130), Expect = 7.690e-5
Identity = 39/105 (37.14%), Postives = 54/105 (51.43%), Query Frame = 0 
Query:   31 LDEAFCDSLERIESSYDTLE------RALKIRVEAWVVKLNGPHPLPSVAWRKNRNAFAALLARAIEEVD----------FREPFDKRPPEGSLPTLAPHLRLRI 119
            LDEAF  +L RI+ +  +L       RA  +RV  WV KL+ P  L +VAW +NRN  AA+LA  +              +  PFDK P +G L  L  H+R+ +
Sbjct:  127 LDEAFWAALYRIDHAVKSLRLTGSISRADAVRVRKWVDKLSAP--LFNVAWLRNRNLHAAVLASILSSHSTCPASRNGRLWVAPFDKLPYDGPLRALPRHMRMYV 229
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1074.718.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FX91_ECTSI6.440e-5057.89DUF4485 domain-containing protein n=1 Tax=Ectocarp... [more]
A0A0L0DHD2_THETB7.690e-537.14DUF4485 domain-containing protein n=1 Tax=Thecamon... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 245..265
NoneNo IPR availablePANTHERPTHR18871FAMILY NOT NAMEDcoord: 25..112
IPR027831Domain of unknown function DUF4485PFAMPF14846DUF4485coord: 31..113
e-value: 2.3E-18
score: 66.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1074contigF-serratus_M_contig1074:237387..249615 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1074.718.1mRNA_F-serratus_M_contig1074.718.1Fucus serratus malemRNAF-serratus_M_contig1074 237305..249883 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1074.718.1 ID=prot_F-serratus_M_contig1074.718.1|Name=mRNA_F-serratus_M_contig1074.718.1|organism=Fucus serratus male|type=polypeptide|length=448bp
MRNRNEGWRRAEEASAATYRSNSAHPTFDSLDEAFCDSLERIESSYDTLE
RALKIRVEAWVVKLNGPHPLPSVAWRKNRNAFAALLARAIEEVDFREPFD
KRPPEGSLPTLAPHLRLRIPDRSSSLGRGRTFWGQQRDRLDNVRGRCAGP
SEIATDPPRTFQRERWHGWNTSAAPTYSSRRVLDGGNVTRRCPSQREWFE
RSMSLGCTGRAQGGHCFHAPGGSTSGKECLVVECEWCKGDAAARIRALQE
TVEKQALQIEALGARHASRETERMEESKRLRHSLDLFRLGRARLQEGTPR
ETHGPERLRTDEDKEDEENVCAKGVEVKVEGLEERCGTANHSQRFGSSHP
SRRAAASSRTASAASLTEVGQRPGTSWPRGGDVQGCTRNTSNTPPSAPHR
ASASKGLMDPDLEQRLERFEEDARVLVDIVKRGGHSSRRWCLLSISP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027831DUF4485