mRNA_F-serratus_M_contig1074.718.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig1074.718.1 vs. uniprot
Match: D7FX91_ECTSI (DUF4485 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX91_ECTSI) HSP 1 Score: 185 bits (470), Expect = 5.450e-49 Identity = 99/171 (57.89%), Postives = 122/171 (71.35%), Query Frame = 2
Query: 140 RSNSAHPTFDSLDEAFCDSLERIESSYDTLERALK-IRVEAWVVKLNGPHPLPSVAWRKNRNAFAALLARAIEEVDFREPFDKRPPEGSLPTLAPHLRLRIPDRSSSLGRGRTFWGQQRDRLDNVRGRCAGP-SEIATDPPRTFQRERWHGWN-TSAAPTYSSRRVLDGGN 643
R+N+AHP+++SLD FC LER+E++Y TL +A K IRVE W+ KLNGP+PLP+VAWRKNRNAFAALLARA+EEVDFREPFD+RPPEGSLPTLAPHLR RIPDR+ G FW + R LD RG + A + RTFQ R + TS P ++S + GG+
Sbjct: 22 RNNAAHPSYESLDAFFCGCLERVEAAYATLNKAFKKIRVECWIAKLNGPYPLPNVAWRKNRNAFAALLARAVEEVDFREPFDRRPPEGSLPTLAPHLRARIPDRNPFQRTGSDFWLRHRAWLDTSRGLSGRDFANEAAEASRTFQPTRRGSPSPTSQDPRFASPGLQGGGH 192 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1074.718.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1074.718.1 >prot_F-serratus_M_contig1074.718.1 ID=prot_F-serratus_M_contig1074.718.1|Name=mRNA_F-serratus_M_contig1074.718.1|organism=Fucus serratus male|type=polypeptide|length=448bp MRNRNEGWRRAEEASAATYRSNSAHPTFDSLDEAFCDSLERIESSYDTLEback to top mRNA from alignment at F-serratus_M_contig1074:237305..249883+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1074.718.1 ID=mRNA_F-serratus_M_contig1074.718.1|Name=mRNA_F-serratus_M_contig1074.718.1|organism=Fucus serratus male|type=mRNA|length=12579bp|location=Sequence derived from alignment at F-serratus_M_contig1074:237305..249883+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1074:237305..249883+ >mRNA_F-serratus_M_contig1074.718.1 ID=mRNA_F-serratus_M_contig1074.718.1|Name=mRNA_F-serratus_M_contig1074.718.1|organism=Fucus serratus male|type=CDS|length=2688bp|location=Sequence derived from alignment at F-serratus_M_contig1074:237305..249883+ (Fucus serratus male)back to top |