prot_F-serratus_M_contig1059.581.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1059.581.1
Unique Nameprot_F-serratus_M_contig1059.581.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length76
Homology
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BLAST of mRNA_F-serratus_M_contig1059.581.1 vs. uniprot
Match: A0A6S7FI90_PARCT (ATP-dependent DNA helicase n=2 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7FI90_PARCT)

HSP 1 Score: 52.0 bits (123), Expect = 6.360e-6
Identity = 23/52 (44.23%), Postives = 40/52 (76.92%), Query Frame = 0 
Query:   16 GLTFVCLSRAKRLTDLLIEPMTFERLSKLGEKPTLRLRLREEERLRALAGET 67
            G+T+V +SR + L+ L+IEP+TF+RL+ + +   L+ R++EEERL+ +A +T
Sbjct:  716 GMTYVAISRVRNLSSLIIEPITFDRLTSIKQLEALKYRVKEEERLKKIARKT 767
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BLAST of mRNA_F-serratus_M_contig1059.581.1 vs. uniprot
Match: UPI00109BE5C8 (uncharacterized protein LOC110237019 n=1 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI00109BE5C8)

HSP 1 Score: 52.0 bits (123), Expect = 6.500e-6
Identity = 29/59 (49.15%), Postives = 39/59 (66.10%), Query Frame = 0 
Query:   16 GLTFVCLSRAKRLTDLLIEPMTFERLSKLGEKPTLRLRLREEERLRALAGET---LHHH 71
            G+++V +SR K L  L+IEPM+FERL+ +    TL+ RLREE RL  LA  T    H+H
Sbjct: 1972 GISYVAISRVKTLASLVIEPMSFERLTSVRSSTTLQYRLREESRLDDLAQLTNNAFHYH 2030
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BLAST of mRNA_F-serratus_M_contig1059.581.1 vs. uniprot
Match: UPI000E6FAFB5 (uncharacterized protein LOC113291610 n=1 Tax=Papaver somniferum TaxID=3469 RepID=UPI000E6FAFB5)

HSP 1 Score: 49.3 bits (116), Expect = 2.360e-5
Identity = 29/50 (58.00%), Postives = 35/50 (70.00%), Query Frame = 0 
Query:   16 GLTFVCLSRAKRLTDLLIEPMT-FERLSKLGEKPTLRLRLREEERLRALA 64
            GLTFV LSR +RL+DL   PM  FER+ K+GE   L  R REEERL+ L+
Sbjct:  109 GLTFVALSRTRRLSDLAFHPMLRFERIYKIGECKALPERRREEERLQELS 158
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BLAST of mRNA_F-serratus_M_contig1059.581.1 vs. uniprot
Match: A0A7J7NPJ0_9MAGN (ATP-dependent DNA helicase n=1 Tax=Kingdonia uniflora TaxID=39325 RepID=A0A7J7NPJ0_9MAGN)

HSP 1 Score: 49.3 bits (116), Expect = 5.480e-5
Identity = 28/50 (56.00%), Postives = 36/50 (72.00%), Query Frame = 0 
Query:   16 GLTFVCLSRAKRLTDLLIEPM-TFERLSKLGEKPTLRLRLREEERLRALA 64
            GLTFV LSR ++L+DL  +PM TFERL KLG+   L  R+ EEE LR ++
Sbjct:  337 GLTFVALSRTRKLSDLAFKPMFTFERLQKLGKCAGLNSRMEEEECLRLMS 386
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BLAST of mRNA_F-serratus_M_contig1059.581.1 vs. uniprot
Match: A0A7J6WG84_THATH (ATP-dependent DNA helicase n=1 Tax=Thalictrum thalictroides TaxID=46969 RepID=A0A7J6WG84_THATH)

HSP 1 Score: 49.3 bits (116), Expect = 5.600e-5
Identity = 28/50 (56.00%), Postives = 36/50 (72.00%), Query Frame = 0 
Query:   16 GLTFVCLSRAKRLTDLLIEPM-TFERLSKLGEKPTLRLRLREEERLRALA 64
             LTFV LSR ++L+DL   PM TFERL K+G+   L+ RL EEERLR ++
Sbjct:  479 SLTFVALSRTRKLSDLAFSPMFTFERLQKIGKCAGLKPRLDEEERLRIMS 528
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1059.581.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6S7FI90_PARCT6.360e-644.23ATP-dependent DNA helicase n=2 Tax=Paramuricea cla... [more]
UPI00109BE5C86.500e-649.15uncharacterized protein LOC110237019 n=1 Tax=Exaip... [more]
UPI000E6FAFB52.360e-558.00uncharacterized protein LOC113291610 n=1 Tax=Papav... [more]
A0A7J7NPJ0_9MAGN5.480e-556.00ATP-dependent DNA helicase n=1 Tax=Kingdonia unifl... [more]
A0A7J6WG84_THATH5.600e-556.00ATP-dependent DNA helicase n=1 Tax=Thalictrum thal... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..25
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 22..25
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 26..75
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 10..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..9

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1059contigF-serratus_M_contig1059:107362..107589 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1059.581.1mRNA_F-serratus_M_contig1059.581.1Fucus serratus malemRNAF-serratus_M_contig1059 106996..107623 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1059.581.1 ID=prot_F-serratus_M_contig1059.581.1|Name=mRNA_F-serratus_M_contig1059.581.1|organism=Fucus serratus male|type=polypeptide|length=76bp
MLLLPRPRGWLLGHYGLTFVCLSRAKRLTDLLIEPMTFERLSKLGEKPTL
RLRLREEERLRALAGETLHHHGGVA*
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