prot_F-serratus_M_contig1051.545.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1051.545.1
Unique Nameprot_F-serratus_M_contig1051.545.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length142
Homology
BLAST of mRNA_F-serratus_M_contig1051.545.1 vs. uniprot
Match: A0A7S2WIF9_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2WIF9_9STRA)

HSP 1 Score: 98.2 bits (243), Expect = 1.110e-22
Identity = 48/100 (48.00%), Postives = 62/100 (62.00%), Query Frame = 0
Query:    1 MAQIIDSLLASADSFAFREPVDWRGLGLHDYPVIITRPMDLGTVKLRLQQGAYSGADEFAADVRLIWDNCRTYNCGGVPRKLHKAADVLSKRFEARFVKL 100
            +++++    A AD+  FRE VDW+GLGL DYP II +PMDLG VK  ++   Y    E A DVRLIW NC TYN  G     +  A  +SK+FE +F KL
Sbjct:   11 LSKLLGHFYAKADAEPFREAVDWKGLGLFDYPQIIKKPMDLGQVKRNIETSKYKTIHEAAEDVRLIWKNCMTYNADG--SDFYILAQNMSKKFEDKFSKL 108          
BLAST of mRNA_F-serratus_M_contig1051.545.1 vs. uniprot
Match: A0A7S1XM82_9STRA (Hypothetical protein n=3 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XM82_9STRA)

HSP 1 Score: 98.2 bits (243), Expect = 1.300e-22
Identity = 48/105 (45.71%), Postives = 64/105 (60.95%), Query Frame = 0
Query:    1 MAQIIDSLLASADSFAFREPVDWRGLGLHDYPVIITRPMDLGTVKLRLQQGAYSGADEFAADVRLIWDNCRTYNCGGVPRKLHKAADVLSKRFEARFVKLGEAGA 105
            MA  +  L    +++ F EPVDW+G+GL DYP II  PMDLGTV+ +L    Y  A E A D+RL+W NC TYN  G     +K A+  SK+FE +F  + +A A
Sbjct:   12 MASGLGFLDKQQEAYIFAEPVDWKGMGLFDYPQIIKHPMDLGTVRQKLNNKEYRTASECAEDIRLVWRNCMTYNQDG--SDFYKIAERFSKKFETKFAPVAKAEA 114          
BLAST of mRNA_F-serratus_M_contig1051.545.1 vs. uniprot
Match: A0A0G4J1W6_PLABS (Uncharacterized protein n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4J1W6_PLABS)

HSP 1 Score: 99.4 bits (246), Expect = 1.660e-22
Identity = 49/97 (50.52%), Postives = 63/97 (64.95%), Query Frame = 0
Query:    4 IIDSLLASADSFAFREPVDWRGLGLHDYPVIITRPMDLGTVKLRLQQGAYSGADEFAADVRLIWDNCRTYNCGGVPRKLHKAADVLSKRFEARFVKL 100
            I+  + A AD+  F +PVDW  LG+ DYP II  PMDLGT+K +L+ G Y+   EFA DVRL W+N +TYN  G    ++ AAD LSK F+ R  KL
Sbjct:   81 ILKQVAARADAAPFLDPVDWEELGIPDYPEIIKNPMDLGTIKKKLEDGKYANEQEFADDVRLTWNNAKTYNQPG--SGIYVAADNLSKLFDRRMQKL 175          
BLAST of mRNA_F-serratus_M_contig1051.545.1 vs. uniprot
Match: A0A7S0F5U8_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7S0F5U8_9STRA)

HSP 1 Score: 98.2 bits (243), Expect = 1.680e-22
Identity = 48/100 (48.00%), Postives = 65/100 (65.00%), Query Frame = 0
Query:    1 MAQIIDSLLASADSFAFREPVDWRGLGLHDYPVIITRPMDLGTVKLRLQQGAYSGADEFAADVRLIWDNCRTYNCGGVPRKLHKAADVLSKRFEARFVKL 100
            +++I+ +++A AD+  FREPVDW+GLG+ DYP II +PMDLGTVK R+    Y+   + A DVRL+W NC TYN  G        A  LSK +E +F K 
Sbjct:   12 LSKIVTAVMARADAAPFREPVDWKGLGIMDYPQIIKKPMDLGTVKKRISGRKYNTVFDAANDVRLVWTNCMTYNQDG--SDFFVIAKRLSKLWEDKFAKF 109          
BLAST of mRNA_F-serratus_M_contig1051.545.1 vs. uniprot
Match: A0A7S0UGI7_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia delicatissima TaxID=44447 RepID=A0A7S0UGI7_9STRA)

HSP 1 Score: 97.1 bits (240), Expect = 2.660e-22
Identity = 45/100 (45.00%), Postives = 64/100 (64.00%), Query Frame = 0
Query:    1 MAQIIDSLLASADSFAFREPVDWRGLGLHDYPVIITRPMDLGTVKLRLQQGAYSGADEFAADVRLIWDNCRTYNCGGVPRKLHKAADVLSKRFEARFVKL 100
            M++++ S++  +D+  FR PVDW+G+GL DYP +I +PMDLG+VK  +    Y    E A D+RL+W NC TYN  G    L   A  LSK+FE ++ KL
Sbjct:   12 MSKVLQSMIQRSDTEPFRVPVDWKGMGLFDYPTLIKKPMDLGSVKRNINARKYKSIPEAAEDIRLVWTNCMTYNQDGSDFFL--LAKNLSKKFEEKYSKL 109          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1051.545.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S2WIF9_9STRA1.110e-2248.00Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
A0A7S1XM82_9STRA1.300e-2245.71Hypothetical protein n=3 Tax=Phaeomonas parva TaxI... [more]
A0A0G4J1W6_PLABS1.660e-2250.52Uncharacterized protein n=1 Tax=Plasmodiophora bra... [more]
A0A7S0F5U8_9STRA1.680e-2248.00Hypothetical protein n=1 Tax=Craspedostauros austr... [more]
A0A7S0UGI7_9STRA2.660e-2245.00Hypothetical protein n=1 Tax=Pseudo-nitzschia deli... [more]

Pages

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001487BromodomainPRINTSPR00503BROMODOMAINcoord: 28..44
score: 47.44
coord: 12..25
score: 31.68
coord: 44..62
score: 28.95
coord: 62..81
score: 34.67
IPR001487BromodomainSMARTSM00297bromo_6coord: 1..102
e-value: 1.1E-15
score: 68.1
IPR001487BromodomainPFAMPF00439Bromodomaincoord: 2..74
e-value: 2.0E-17
score: 63.0
IPR001487BromodomainPROSITEPS50014BROMODOMAIN_2coord: 9..74
score: 15.618
IPR036427Bromodomain-like superfamilyGENE3D1.20.920.10coord: 1..106
e-value: 1.6E-30
score: 107.7
IPR036427Bromodomain-like superfamilySUPERFAMILY47370Bromodomaincoord: 2..100
NoneNo IPR availablePANTHERPTHR45926FAMILY NOT NAMEDcoord: 3..101
NoneNo IPR availablePANTHERPTHR45926:SF5TRANSCRIPTION FACTOR GTE4coord: 3..101

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1051contigF-serratus_M_contig1051:180369..181170 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1051.545.1mRNA_F-serratus_M_contig1051.545.1Fucus serratus malemRNAF-serratus_M_contig1051 180369..181457 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1051.545.1 ID=prot_F-serratus_M_contig1051.545.1|Name=mRNA_F-serratus_M_contig1051.545.1|organism=Fucus serratus male|type=polypeptide|length=142bp
MAQIIDSLLASADSFAFREPVDWRGLGLHDYPVIITRPMDLGTVKLRLQQ
GAYSGADEFAADVRLIWDNCRTYNCGGVPRKLHKAADVLSKRFEARFVKL
GEAGAGVGPRPARRARENWGRRLRRTLRRQPTRIGASLRGN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001487Bromodomain
IPR036427Bromodomain-like_sf