mRNA_F-serratus_M_contig1051.545.1 (mRNA) Fucus serratus male
Overview
Homology
BLAST of mRNA_F-serratus_M_contig1051.545.1 vs. uniprot
Match: A0A6H5K301_9PHAE (Bromo domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K301_9PHAE) HSP 1 Score: 157 bits (397), Expect = 1.040e-42 Identity = 77/102 (75.49%), Postives = 83/102 (81.37%), Query Frame = 1 Query: 10 IIDSLLASADSFAFREPVDWRGLGLHDYPVIITRPMDLGTVKLRLQQGAYSGADEFAADVRLIWDNCRTYNCGGVPRKLHKA-----ADVLSKRFEARFVKL 300 +IDSLL SADS AFREPVDWRGLGLHDYP +I RPMDLGTVKLRL++GAY A+ AADVRLIWDNCRTYN GGVPR LHKA AD LSKRFE R K+ Sbjct: 26 LIDSLLGSADSEAFREPVDWRGLGLHDYPNLIKRPMDLGTVKLRLERGAYPTAEACAADVRLIWDNCRTYNTGGVPRDLHKASEKLAADTLSKRFETRLAKI 127
BLAST of mRNA_F-serratus_M_contig1051.545.1 vs. uniprot
Match: A0A7S2EKB9_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EKB9_TRICV) HSP 1 Score: 112 bits (279), Expect = 9.010e-28 Identity = 55/100 (55.00%), Postives = 70/100 (70.00%), Query Frame = 1 Query: 1 MAQIIDSLLASADSFAFREPVDWRGLGLHDYPVIITRPMDLGTVKLRLQQGAYSGADEFAADVRLIWDNCRTYNCGGVPRKLHKAADVLSKRFEARFVKL 300 M +I++S+LA DS FREPVDWRGL L+DYP II + MDLGTVK +L++G Y A E A D+RLIW NC+TYN G L A+ S+RFE R+ K+ Sbjct: 29 MTKIVNSILARGDSGPFREPVDWRGLELYDYPKIIKKMMDLGTVKRKLERGQYQTAHECAEDIRLIWTNCKTYNADGSDFFL--LAESFSRRFEERYKKV 126
BLAST of mRNA_F-serratus_M_contig1051.545.1 vs. uniprot
Match: A0A8J2WSU6_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WSU6_9STRA) HSP 1 Score: 109 bits (273), Expect = 6.380e-26 Identity = 51/100 (51.00%), Postives = 68/100 (68.00%), Query Frame = 1 Query: 1 MAQIIDSLLASADSFAFREPVDWRGLGLHDYPVIITRPMDLGTVKLRLQQGAYSGADEFAADVRLIWDNCRTYNCGGVPRKLHKAADVLSKRFEARFVKL 300 M +II++L+ DS FREPVDWRGLGL+DYP +I +PMDL TVK +++ Y ++ A D+RLIW+NC+ YN G + AD SKRFE RF K+ Sbjct: 10 MTKIINTLMQRPDSVPFREPVDWRGLGLYDYPQVIAKPMDLTTVKQTIERQGYKSVNDCADDIRLIWNNCKKYNQDG--SDFYNLADGFSKRFEERFSKV 107
BLAST of mRNA_F-serratus_M_contig1051.545.1 vs. uniprot
Match: A0A7S2UQ34_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UQ34_9STRA) HSP 1 Score: 108 bits (271), Expect = 1.980e-25 Identity = 50/106 (47.17%), Postives = 68/106 (64.15%), Query Frame = 1 Query: 1 MAQIIDSLLASADSFAFREPVDWRGLGLHDYPVIITRPMDLGTVKLRLQQGAYSGADEFAADVRLIWDNCRTYNCGGVPRKLHKAADVLSKRFEARFVKLGEAGAG 318 +A+++ + A D+ FREPV+W+ LGL DYP +I RPMDLG +K L++ YS E AAD++L+W NC TYN G +K A LS FEARF K+ + G G Sbjct: 10 IAKVLAQMYAKPDAEPFREPVEWKALGLFDYPQVIKRPMDLGHIKRNLEKNKYSTVHEVAADIKLVWKNCMTYNADG--SDFYKLAKKLSNSFEARFAKIAKDGGG 113
BLAST of mRNA_F-serratus_M_contig1051.545.1 vs. uniprot
Match: B8BY87_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BY87_THAPS) HSP 1 Score: 110 bits (276), Expect = 2.060e-25 Identity = 52/100 (52.00%), Postives = 68/100 (68.00%), Query Frame = 1 Query: 1 MAQIIDSLLASADSFAFREPVDWRGLGLHDYPVIITRPMDLGTVKLRLQQGAYSGADEFAADVRLIWDNCRTYNCGGVPRKLHKAADVLSKRFEARFVKL 300 M +I+D+LLA ADS FREPVDW+G+ L+DYP ++ R MDLGTVK +L G Y+ A E A DVR +W NC YN G + A++ S+RFE RF K+ Sbjct: 22 MKKIVDNLLARADSVPFREPVDWKGMELYDYPKVVKRMMDLGTVKKKLTGGKYADASECADDVRQVWKNCMLYNADG--SDFYALAELFSRRFEERFQKI 119
BLAST of mRNA_F-serratus_M_contig1051.545.1 vs. uniprot
Match: A0A7S0BZA1_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0BZA1_9STRA) HSP 1 Score: 106 bits (264), Expect = 2.730e-25 Identity = 53/96 (55.21%), Postives = 66/96 (68.75%), Query Frame = 1 Query: 1 MAQIIDSLLASADSFAFREPVDWRGLGLHDYPVIITRPMDLGTVKLRLQQGAYSGADEFAADVRLIWDNCRTYNCGGVPRKLHKAADVLSKRFEAR 288 MA++++SLLA D FREPVDWRGL L DYP +I + MDLGTVK +L++G YS E A D+RL+W NC+TYN G L A+ SKRFE R Sbjct: 48 MAKLVNSLLARVDCGPFREPVDWRGLELWDYPKVIKKMMDLGTVKRKLERGQYSTPAECAVDIRLVWTNCKTYNADGSDFFL--LAESFSKRFEDR 141
BLAST of mRNA_F-serratus_M_contig1051.545.1 vs. uniprot
Match: A0A7S2KYB1_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2KYB1_9STRA) HSP 1 Score: 105 bits (263), Expect = 8.620e-24 Identity = 52/100 (52.00%), Postives = 67/100 (67.00%), Query Frame = 1 Query: 1 MAQIIDSLLASADSFAFREPVDWRGLGLHDYPVIITRPMDLGTVKLRLQQGAYSGADEFAADVRLIWDNCRTYNCGGVPRKLHKAADVLSKRFEARFVKL 300 MA+++++L A AD FREPVDW+ L L+DYP II + MDLGT+K +L + YS A E A DVRL+W NC TYN G ++ + SKRFE RF KL Sbjct: 19 MAKMVNNLSARADCEPFREPVDWKALELYDYPKIIKKMMDLGTIKRKLDKEKYSDAAECADDVRLVWKNCMTYNADG--SDFYRLGESYSKRFEERFQKL 116
BLAST of mRNA_F-serratus_M_contig1051.545.1 vs. uniprot
Match: A0A7S3JU45_9STRA (Hypothetical protein n=2 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JU45_9STRA) HSP 1 Score: 103 bits (256), Expect = 2.090e-23 Identity = 47/100 (47.00%), Postives = 65/100 (65.00%), Query Frame = 1 Query: 1 MAQIIDSLLASADSFAFREPVDWRGLGLHDYPVIITRPMDLGTVKLRLQQGAYSGADEFAADVRLIWDNCRTYNCGGVPRKLHKAADVLSKRFEARFVKL 300 M +I+D L+ D+ F EPVDW+GLGL DYP +I +PMDLGTVK ++++ Y+ A D+RL+W NC+ YN G A+ LSKRFE +F K+ Sbjct: 4 MKKIVDKLMKRQDAVPFLEPVDWQGLGLVDYPKMIKKPMDLGTVKKKIEENEYASVHACAEDIRLVWSNCKKYNQDG--SDFFNLAESLSKRFEDQFAKV 101
BLAST of mRNA_F-serratus_M_contig1051.545.1 vs. uniprot
Match: A0A7S2UZN8_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UZN8_9STRA) HSP 1 Score: 103 bits (257), Expect = 2.520e-23 Identity = 47/100 (47.00%), Postives = 66/100 (66.00%), Query Frame = 1 Query: 1 MAQIIDSLLASADSFAFREPVDWRGLGLHDYPVIITRPMDLGTVKLRLQQGAYSGADEFAADVRLIWDNCRTYNCGGVPRKLHKAADVLSKRFEARFVKL 300 M +I+ L+ D+ FREPVDWR L + DYP I+ RPMDLGT+K +L+ G Y E AAD+RL+W+NC YN G ++ A+ LSK+FE ++ K+ Sbjct: 44 MKKIVSYLMTRQDAVPFREPVDWRQLQIFDYPQIVKRPMDLGTIKKKLENGEYRTPAECAADIRLVWENCMIYNQDG--SDYYRLAEKLSKKFEDKYAKV 141
BLAST of mRNA_F-serratus_M_contig1051.545.1 vs. uniprot
Match: A0A7S2PE54_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PE54_9STRA) HSP 1 Score: 103 bits (258), Expect = 3.110e-23 Identity = 50/100 (50.00%), Postives = 67/100 (67.00%), Query Frame = 1 Query: 1 MAQIIDSLLASADSFAFREPVDWRGLGLHDYPVIITRPMDLGTVKLRLQQGAYSGADEFAADVRLIWDNCRTYNCGGVPRKLHKAADVLSKRFEARFVKL 300 M++++ S++ +D+ FREPV+WR L L DYP II RPMDLGTVK +L+ Y A+E A D+RLIW NC TYN G + A LS++FE RF K+ Sbjct: 17 MSKLVSSMMTKSDTAPFREPVNWRELELWDYPKIIKRPMDLGTVKRKLESTQYETANECAEDIRLIWSNCMTYNQEG--SDFYLLAQALSRKFEDRFRKV 114 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1051.545.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1051.545.1 >prot_F-serratus_M_contig1051.545.1 ID=prot_F-serratus_M_contig1051.545.1|Name=mRNA_F-serratus_M_contig1051.545.1|organism=Fucus serratus male|type=polypeptide|length=142bp MAQIIDSLLASADSFAFREPVDWRGLGLHDYPVIITRPMDLGTVKLRLQQback to top mRNA from alignment at F-serratus_M_contig1051:180369..181457+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1051.545.1 ID=mRNA_F-serratus_M_contig1051.545.1|Name=mRNA_F-serratus_M_contig1051.545.1|organism=Fucus serratus male|type=mRNA|length=1089bp|location=Sequence derived from alignment at F-serratus_M_contig1051:180369..181457+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1051:180369..181457+ >mRNA_F-serratus_M_contig1051.545.1 ID=mRNA_F-serratus_M_contig1051.545.1|Name=mRNA_F-serratus_M_contig1051.545.1|organism=Fucus serratus male|type=CDS|length=852bp|location=Sequence derived from alignment at F-serratus_M_contig1051:180369..181457+ (Fucus serratus male)back to top |