prot_F-serratus_M_contig1051.545.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1051.545.1
Unique Nameprot_F-serratus_M_contig1051.545.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length142
Homology
BLAST of mRNA_F-serratus_M_contig1051.545.1 vs. uniprot
Match: A0A448ZMK4_9STRA (Bromo domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZMK4_9STRA)

HSP 1 Score: 103 bits (257), Expect = 2.370e-24
Identity = 51/100 (51.00%), Postives = 67/100 (67.00%), Query Frame = 0
Query:    1 MAQIIDSLLASADSFAFREPVDWRGLGLHDYPVIITRPMDLGTVKLRLQQGAYSGADEFAADVRLIWDNCRTYNCGGVPRKLHKAADVLSKRFEARFVKL 100
            + +I++SLLA+ D   FREPVDWRGL L DYP +I   MDLGT+K RL++G YS A + A D+RL+W NC TYN  G    L   A   ++RFE R+ K+
Sbjct:   14 ITKIVNSLLANEDCAPFREPVDWRGLELFDYPQVIETMMDLGTIKRRLERGHYSTAHQVAEDIRLVWRNCMTYNADGSDFWL--LAKSYARRFEDRYRKI 111          
BLAST of mRNA_F-serratus_M_contig1051.545.1 vs. uniprot
Match: A0A1Z5KMF2_FISSO (Bromodomain-containing protein 2 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KMF2_FISSO)

HSP 1 Score: 103 bits (257), Expect = 2.830e-24
Identity = 53/108 (49.07%), Postives = 70/108 (64.81%), Query Frame = 0
Query:    1 MAQIIDSLLASADSFAFREPVDWRGLGLHDYPVIITRPMDLGTVKLRLQQGAYSGADEFAADVRLIWDNCRTYNCGGVPRKLHKAADVLSKRFEARFVKLGEAGAGVG 108
            M +I+++ LA  DS  FREPVDWRGL LHDYP II   MDLGT+K +L++  Y  A + A+D+RL+W NC TYN  G    L   A   S+RFE R+ ++ +A   VG
Sbjct:   14 MTKIVNAFLARPDSGPFREPVDWRGLELHDYPEIIKHMMDLGTIKRKLERNQYQTAAQVASDIRLVWSNCMTYNAEGSDFWL--LAKGFSRRFEDRYRRV-KADVDVG 118          
BLAST of mRNA_F-serratus_M_contig1051.545.1 vs. uniprot
Match: A0A448YXV5_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YXV5_9STRA)

HSP 1 Score: 102 bits (253), Expect = 3.370e-24
Identity = 47/100 (47.00%), Postives = 64/100 (64.00%), Query Frame = 0
Query:    1 MAQIIDSLLASADSFAFREPVDWRGLGLHDYPVIITRPMDLGTVKLRLQQGAYSGADEFAADVRLIWDNCRTYNCGGVPRKLHKAADVLSKRFEARFVKL 100
            M++I+ S++  +D+  FR PVDW+G+GL DYP +I +PMDLGTVK  +    Y    E A D+RL+W NC TYN  G     +  A  LSKRFE ++ KL
Sbjct:   12 MSKILQSMIQRSDTEPFRVPVDWKGMGLFDYPTLIKKPMDLGTVKRNINSRKYKSIPEAAEDIRLVWTNCMTYNQDG--SDFYILAKNLSKRFEEKYAKL 109          
BLAST of mRNA_F-serratus_M_contig1051.545.1 vs. uniprot
Match: A0A7S3PZ05_9STRA (Hypothetical protein n=2 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PZ05_9STRA)

HSP 1 Score: 102 bits (253), Expect = 3.950e-24
Identity = 47/116 (40.52%), Postives = 71/116 (61.21%), Query Frame = 0
Query:    1 MAQIIDSLLASADSFAFREPVDWRGLGLHDYPVIITRPMDLGTVKLRLQQGAYSGADEFAADVRLIWDNCRTYNCGGVPRKLHKAADVLSKRFEARFVKL----------GEAGAG 106
            M +++  + +  +S  FR+ VDW  LGL+DYP I+ RPMDLG +K ++++  Y+  ++ A DVRL+W NC+TYN  G     +  AD LS +FE +F KL          G++GAG
Sbjct:    9 MGKLVQQIYSKGESEPFRDAVDWESLGLYDYPQIVKRPMDLGQIKRKIEKEEYASVNDAANDVRLVWQNCKTYNADG--SDFYNLADTLSTKFEDKFAKLLKELGLEAADGKSGAG 122          
BLAST of mRNA_F-serratus_M_contig1051.545.1 vs. uniprot
Match: W7TT69_9STRA (Bromodomain containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TT69_9STRA)

HSP 1 Score: 102 bits (253), Expect = 4.420e-24
Identity = 49/100 (49.00%), Postives = 68/100 (68.00%), Query Frame = 0
Query:    1 MAQIIDSLLASADSFAFREPVDWRGLGLHDYPVIITRPMDLGTVKLRLQQGAYSGADEFAADVRLIWDNCRTYNCGGVPRKLHKAADVLSKRFEARFVKL 100
            M Q++  L    D  AF EPVDW+ LGL DYP++I+ PMDLGT+K RL+ G Y+   + A DVRL+W+NC+TYN  G    L+K AD L+ +FE ++ K+
Sbjct:    9 MYQLVQWLSNQKDVDAFLEPVDWKTLGLTDYPLVISTPMDLGTIKGRLESGHYTKHAQVAEDVRLVWNNCKTYNQEG--SYLYKIADKLAGKFEEKYSKI 106          
BLAST of mRNA_F-serratus_M_contig1051.545.1 vs. uniprot
Match: A0A7R9VVT0_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9VVT0_9STRA)

HSP 1 Score: 101 bits (251), Expect = 7.340e-24
Identity = 48/100 (48.00%), Postives = 63/100 (63.00%), Query Frame = 0
Query:    1 MAQIIDSLLASADSFAFREPVDWRGLGLHDYPVIITRPMDLGTVKLRLQQGAYSGADEFAADVRLIWDNCRTYNCGGVPRKLHKAADVLSKRFEARFVKL 100
            MA+++  + A +D+  FREPVDW+ LGL DYP II +PMDLG VK +++ G Y    + A DVRLIW NC  YN  G        A  +SK+FE +F KL
Sbjct:   11 MAKLVAQIYAKSDAEPFREPVDWKSLGLFDYPQIIKKPMDLGQVKRKIETGKYGAIHDAAEDVRLIWKNCMQYNADG--SDFFILAQNMSKKFEDKFAKL 108          
BLAST of mRNA_F-serratus_M_contig1051.545.1 vs. uniprot
Match: A0A7S0DN66_9EUKA (Hypothetical protein n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0DN66_9EUKA)

HSP 1 Score: 101 bits (251), Expect = 1.160e-23
Identity = 49/102 (48.04%), Postives = 70/102 (68.63%), Query Frame = 0
Query:    3 QIIDSLLASADSFAFREPVDWRGLGLHDYPVIITRPMDLGTVKLRLQQGAYSGADEFAADVRLIWDNCRTYNCGGVPRK-LHKAADVLSKRFEARFVKLGEA 103
            +I+ S+ A +D+  F EPVDW+   L DYP+II RPMDLGT++ R+  G YS A+EFA DVRL+W N + YN   +P   ++K ++ LS+ FE RF KL ++
Sbjct:   27 EILKSVQAKSDAHPFLEPVDWKRFDLPDYPIIIKRPMDLGTIEKRIFDGFYSTANEFALDVRLVWSNAQKYN---LPMSDIYKMSESLSRFFERRFAKLAKS 125          
BLAST of mRNA_F-serratus_M_contig1051.545.1 vs. uniprot
Match: B8BSQ7_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BSQ7_THAPS)

HSP 1 Score: 100 bits (249), Expect = 1.330e-23
Identity = 46/102 (45.10%), Postives = 65/102 (63.73%), Query Frame = 0
Query:    1 MAQIIDSLLASADSFAFREPVDWRGLGLHDYPVIITRPMDLGTVKLRLQQGAYSGADEFAADVRLIWDNCRTYNCGGVPRKLHKAADVLSKRFEARFVKLGE 102
            M++++    A AD+  FREPVD++ LGL DYP+++ +PMDLG VK +L +  Y    + A DVRLIW NC TYN  G     +  A  ++K+FE +F KL E
Sbjct:    8 MSKLVSQFYAKADAEPFREPVDYKALGLVDYPLVVKKPMDLGQVKKKLNESKYKSIHDAADDVRLIWKNCMTYNADG--SDFYLLAQTMAKKFEEKFAKLVE 107          
BLAST of mRNA_F-serratus_M_contig1051.545.1 vs. uniprot
Match: A0A7R9UFP7_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UFP7_9STRA)

HSP 1 Score: 99.8 bits (247), Expect = 3.090e-23
Identity = 47/105 (44.76%), Postives = 67/105 (63.81%), Query Frame = 0
Query:    1 MAQIIDSLLASADSFAFREPVDWRGLGLHDYPVIITRPMDLGTVKLRLQQGAYSGADEFAADVRLIWDNCRTYNCGGVPRKLHKAADVLSKRFEARFVKLGEAGA 105
            M  ++D L    +S+ F EPV+WR +GL+DYP II  PMDLGTV+ +L    Y  A E A D+RL+W NC TYN  G   + +K A+  SK+FE++F  + ++ A
Sbjct:   11 MMGVLDFLDKQTESYIFSEPVNWREMGLYDYPEIIKNPMDLGTVRQKLVNKEYRNATECAEDIRLVWRNCMTYNQDG--SEFYKIAEKFSKKFESKFAPVAKSEA 113          
BLAST of mRNA_F-serratus_M_contig1051.545.1 vs. uniprot
Match: A0A7S1FUF8_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FUF8_9STRA)

HSP 1 Score: 97.8 bits (242), Expect = 4.630e-23
Identity = 46/98 (46.94%), Postives = 62/98 (63.27%), Query Frame = 0
Query:    3 QIIDSLLASADSFAFREPVDWRGLGLHDYPVIITRPMDLGTVKLRLQQGAYSGADEFAADVRLIWDNCRTYNCGGVPRKLHKAADVLSKRFEARFVKL 100
            +++ SLL+  DS  FREPVDWR + L DYP I+ + MDLGT+K +L++G Y    +  ADVRL+W NC  YN  G     +  A+  S RFE R+ KL
Sbjct:   63 KLVSSLLSRNDSAPFREPVDWRAMELWDYPKIVRKMMDLGTIKRKLERGEYRTVQDVVADVRLVWKNCMLYNADG--SDFYLLAEGFSSRFEERWKKL 158          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1051.545.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A448ZMK4_9STRA2.370e-2451.00Bromo domain-containing protein n=1 Tax=Pseudo-nit... [more]
A0A1Z5KMF2_FISSO2.830e-2449.07Bromodomain-containing protein 2 n=2 Tax=Fistulife... [more]
A0A448YXV5_9STRA3.370e-2447.00Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
A0A7S3PZ05_9STRA3.950e-2440.52Hypothetical protein n=2 Tax=Chaetoceros debilis T... [more]
W7TT69_9STRA4.420e-2449.00Bromodomain containing protein n=3 Tax=Monodopsida... [more]
A0A7R9VVT0_9STRA7.340e-2448.00Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]
A0A7S0DN66_9EUKA1.160e-2348.04Hypothetical protein n=1 Tax=Amorphochlora amoebif... [more]
B8BSQ7_THAPS1.330e-2345.10Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]
A0A7R9UFP7_9STRA3.090e-2344.76Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7S1FUF8_9STRA4.630e-2346.94Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001487BromodomainPRINTSPR00503BROMODOMAINcoord: 28..44
score: 47.44
coord: 12..25
score: 31.68
coord: 44..62
score: 28.95
coord: 62..81
score: 34.67
IPR001487BromodomainSMARTSM00297bromo_6coord: 1..102
e-value: 1.1E-15
score: 68.1
IPR001487BromodomainPFAMPF00439Bromodomaincoord: 2..74
e-value: 2.0E-17
score: 63.0
IPR001487BromodomainPROSITEPS50014BROMODOMAIN_2coord: 9..74
score: 15.618
IPR036427Bromodomain-like superfamilyGENE3D1.20.920.10coord: 1..106
e-value: 1.6E-30
score: 107.7
IPR036427Bromodomain-like superfamilySUPERFAMILY47370Bromodomaincoord: 2..100
NoneNo IPR availablePANTHERPTHR45926FAMILY NOT NAMEDcoord: 3..101
NoneNo IPR availablePANTHERPTHR45926:SF5TRANSCRIPTION FACTOR GTE4coord: 3..101

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1051contigF-serratus_M_contig1051:180369..181170 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1051.545.1mRNA_F-serratus_M_contig1051.545.1Fucus serratus malemRNAF-serratus_M_contig1051 180369..181457 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1051.545.1 ID=prot_F-serratus_M_contig1051.545.1|Name=mRNA_F-serratus_M_contig1051.545.1|organism=Fucus serratus male|type=polypeptide|length=142bp
MAQIIDSLLASADSFAFREPVDWRGLGLHDYPVIITRPMDLGTVKLRLQQ
GAYSGADEFAADVRLIWDNCRTYNCGGVPRKLHKAADVLSKRFEARFVKL
GEAGAGVGPRPARRARENWGRRLRRTLRRQPTRIGASLRGN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001487Bromodomain
IPR036427Bromodomain-like_sf