prot_F-serratus_M_contig105.515.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig105.515.1
Unique Nameprot_F-serratus_M_contig105.515.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length365
Homology
BLAST of mRNA_F-serratus_M_contig105.515.1 vs. uniprot
Match: A0A5C6AGS2_9BACT (Uracil DNA glycosylase superfamily protein n=1 Tax=Botrimarina colliarenosi TaxID=2528001 RepID=A0A5C6AGS2_9BACT)

HSP 1 Score: 221 bits (563), Expect = 2.640e-67
Identity = 116/239 (48.54%), Postives = 151/239 (63.18%), Query Frame = 0
Query:  107 NLIIASRRLHERLKGKTWKGTKKQPVACSYDVLEYAWDPYEAYTRQYGGGRALGRALVVGMNPGPWGMVQTGVPFGEVDHVRDWLGVSGVVGRPSEEHPKRPVEGFSCKRSEVSGKRLWGFFKRRFGTADAWGDKMFVYNYCPLTFMSSSGGNITPDRLPPGEREVVEAACNDALVKIIAALRPRVVIGVGKFTGAKCLEAMTAMGSGPRGGNVEVEVVVVNHPSPASPSGVK-WERAA 344
            + I A++RL + +    +     +PV   Y+ L+YAW  +EAY R+        R L +GMNPGPWGM QTGVPFGEV   RDW+G+   V RP +EHPKRP+EGF+C+RSEVSG+RLWG F  RFGTADA+  + FV NYCPL FM+ +G N TPD+LP  ERE ++AAC+  L +++   RP   +GVGK+   KCL  +   G         V V  V HPSPASP+  + W  AA
Sbjct:    6 DAIRAAKRLSKAVDALRFD----EPVTHVYNPLKYAWAAHEAYLRRMNPDGV--RVLFLGMNPGPWGMAQTGVPFGEVAAARDWIGIEAAVRRPKDEHPKRPIEGFACQRSEVSGRRLWGLFAERFGTADAFFAEHFVANYCPLVFMTETGKNHTPDKLPLDEREPLDAACDQHLSRLLDIARPEWAVGVGKYA-EKCLLRVAGEG---------VRVTTVLHPSPASPAANRGWAEAA 228          
BLAST of mRNA_F-serratus_M_contig105.515.1 vs. uniprot
Match: A0A3N5QI00_9GAMM (Single-strand selective monofunctional uracil-DNA glycosylase n=1 Tax=Xanthomonadales bacterium TaxID=2006849 RepID=A0A3N5QI00_9GAMM)

HSP 1 Score: 221 bits (562), Expect = 3.510e-67
Identity = 114/248 (45.97%), Postives = 152/248 (61.29%), Query Frame = 0
Query:  108 LIIASRRLHERLKGKTWKGTKKQPVACSYDVLEYAWDPYEAYTRQYGGGRALGRALVVGMNPGPWGMVQTGVPFGEVDHVRDWLGVSGVVGRPSEEHPKRPVEGFSCKRSEVSGKRLWGFFKRRFGTADAWGDKMFVYNYCPLTFMSSSGGNITPDRLPPGEREVVEAACNDALVKIIAALRPRVVIGVGKFTGAKCLEAMTAMGSGPRGGNVEVEVVVVNHPSPASPSGVK-WERAAGMDELVLGCS 354
            L+  SR L ER+    +      PV C Y+ LEYA  P+E Y  +YGGG      L++GMNPGP+GM QTGVPFG+V  VRDWLG+   V RP +EHPKRPV GF C R+E+SG RLWG+ + RFGT   + ++ FV NYCPL F+++SG N+TPD+LP  E+  V +AC++AL  ++  LRP++VIGVG F   +   A+         G   + +  + HPSPASP   + W  A       LG S
Sbjct:    3 LVDVSRALSERVASLRFA----DPVCCVYNPLEYARAPHELYLSRYGGGPK--EVLLLGMNPGPFGMAQTGVPFGDVTMVRDWLGIVAPVARPRDEHPKRPVLGFDCHRTEISGTRLWGWARDRFGTPQRFFERFFVANYCPLAFVAASGANLTPDKLPAAEQRAVSSACDEALRAVVRLLRPQIVIGVGGFAERRARAAL---------GGENIAIGTILHPSPASPLANRGWAGAIERQLQSLGIS 235          
BLAST of mRNA_F-serratus_M_contig105.515.1 vs. uniprot
Match: Q39ZI0_GEOMG (Uncharacterized protein n=2 Tax=Geobacter TaxID=28231 RepID=Q39ZI0_GEOMG)

HSP 1 Score: 221 bits (562), Expect = 3.620e-67
Identity = 115/223 (51.57%), Postives = 148/223 (66.37%), Query Frame = 0
Query:  131 PVACSYDVLEYAWDPYEAYTRQYGGGRALGRALVVGMNPGPWGMVQTGVPFGEVDHVRDWLGVSGVVGRPSEEHPKRPVEGFSCKRSEVSGKRLWGFFKRRFGTADAWGDKMFVYNYCPLTFMSSSGGNITPDRLPPGEREVVEAACNDALVKIIAALRPRVVIGVGKFTGAKCLEAMTAMGSGPRGGNVEVEVVVVNHPSPASPSGVK-WERAAGMDELVLG 352
            PVA  Y+ L YA +P+ AY  ++G        L VGMNPGPWGM QTGVPFGEV  V +WLG++G V RP+ EHPK+ V+GF+C+RSEVSG+RLWGF + RFGT + +  + FV NYCPL F+++ GGNITPD+L  GE+E + AAC+ AL + +  LRPRVVIGVG F  A+C EA+            +VEV  + HPSPASP+  + W   A      LG
Sbjct:   23 PVAHVYNPLLYAREPHVAYLSRFGSPPK--EVLFVGMNPGPWGMAQTGVPFGEVAVVTEWLGINGTVTRPAGEHPKKRVDGFACRRSEVSGRRLWGFIRERFGTPERFFARFFVANYCPLLFLTAEGGNITPDKLRRGEQEPLFAACDLALRRTVVLLRPRVVIGVGAFAEARCHEALEGF---------DVEVGRIIHPSPASPAANRDWAGTALRQLAELG 234          
BLAST of mRNA_F-serratus_M_contig105.515.1 vs. uniprot
Match: A0A4V1SDI5_9BACT (Single-strand selective monofunctional uracil-DNA glycosylase n=2 Tax=Verrucomicrobiaceae TaxID=203557 RepID=A0A4V1SDI5_9BACT)

HSP 1 Score: 221 bits (562), Expect = 3.860e-67
Identity = 117/238 (49.16%), Postives = 151/238 (63.45%), Query Frame = 0
Query:  108 LIIASRRLHERLKGKTWKGTKKQPVACSYDVLEYAWDPYEAYTRQYGGGRALGRALVVGMNPGPWGMVQTGVPFGEVDHVRDWLGVSGVVGRPSEEHPKRPVEGFSCKRSEVSGKRLWGFFKRRFGTADAWGDKMFVYNYCPLTFMSSSGGNITPDRLPPGEREVVEAACNDALVKIIAALRPRVVIGVGKFTGAKCLEAMTAMGSGPRGGNVEVEVVVVNHPSPASPSGVK-WERAA 344
            LI ++ RL E L+   +      PVA  Y  L+Y W+ +  Y  ++G G+   + + +GMNPGP+GM QTGVPFGEV  VRDW+G+   VG+P  EHPKRP+EGF+C+RSEVSG+RLWG F  RFGTADA+    FV NYCPL +MSS+G N+TPD+L   E   VEAAC   L ++IA L+P  +IGVG F   +   A  + GS  R G V        HPSPASP+  + W  AA
Sbjct:    4 LIASTGRLAEDLRELEFS----PPVAHVYRTLDYTWEAHRKYLERFGKGKK--KVVFLGMNPGPFGMAQTGVPFGEVAAVRDWMGIEASVGKPPHEHPKRPIEGFACQRSEVSGRRLWGLFSERFGTADAFFKDHFVLNYCPLVWMSSTGANLTPDKLSAAEMAPVEAACQKHLQEVIALLKPSWLIGVGGFAEERLRRAAESSGSKARIGRVL-------HPSPASPAANRGWAEAA 228          
BLAST of mRNA_F-serratus_M_contig105.515.1 vs. uniprot
Match: A0A1Q3VS10_9PROT (Single-stranded DNA-binding protein n=1 Tax=Candidatus Accumulibacter sp. 66-26 TaxID=1895689 RepID=A0A1Q3VS10_9PROT)

HSP 1 Score: 221 bits (562), Expect = 4.380e-67
Identity = 116/246 (47.15%), Postives = 156/246 (63.41%), Query Frame = 0
Query:  108 LIIASRRLHERLKGKTWKGTKKQPVACSYDVLEYAWDPYEAYTRQYGGGRALGRALVVGMNPGPWGMVQTGVPFGEVDHVRDWLGVSGVVGRPSEEHPKRPVEGFSCKRSEVSGKRLWGFFKRRFGTADAWGDKMFVYNYCPLTFMSSSGGNITPDRLPPGEREVVEAACNDALVKIIAALRPRVVIGVGKFTGAKCLEAMTAMGSGPRGGNVEVEVVVVNHPSPASPSGVK-WERAAGMDELVLG 352
            LI A+R L   +    +      PV+  Y+ L+YAW P+EAY R+YG  R   R + +GMNPGP+GMVQ GVPFGE+D VRDW+G+   +G+P+ E+PKRPVEGF+C RSEVSG+RLW  F+ RFGTADA+  + FV NYCPL F    G N+TPD+LP  E   + AAC+  L  ++AAL+P  VIG+G F  A+ +EA+  +          + +  V HPSPASP+  + W  AA    +  G
Sbjct:   11 LIAAARTLSAAVDALPFA----PPVSHVYNPLDYAWAPHEAYLRRYGAQRK--RIVFLGMNPGPFGMVQCGVPFGEIDAVRDWMGIEAPIGKPARENPKRPVEGFACTRSEVSGRRLWSLFRERFGTADAFFAEHFVANYCPLAFFDH-GRNLTPDKLPAAEAAPLYAACDAHLRALVAALQPEWVIGIGAFAEARAVEALAGL---------PLRIGRVLHPSPASPAANRGWSEAATRQMVAQG 240          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig105.515.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A5C6AGS2_9BACT2.640e-6748.54Uracil DNA glycosylase superfamily protein n=1 Tax... [more]
A0A3N5QI00_9GAMM3.510e-6745.97Single-strand selective monofunctional uracil-DNA ... [more]
Q39ZI0_GEOMG3.620e-6751.57Uncharacterized protein n=2 Tax=Geobacter TaxID=28... [more]
A0A4V1SDI5_9BACT3.860e-6749.16Single-strand selective monofunctional uracil-DNA ... [more]
A0A1Q3VS10_9PROT4.380e-6747.15Single-stranded DNA-binding protein n=1 Tax=Candid... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036895Uracil-DNA glycosylase-like domain superfamilyGENE3D3.40.470.10coord: 104..352
e-value: 7.0E-82
score: 276.2
IPR036895Uracil-DNA glycosylase-like domain superfamilySUPERFAMILY52141Uracil-DNA glycosylase-likecoord: 130..342
IPR039134Single-strand selective monofunctional uracil DNA glycosylasePANTHERPTHR13235SINGLE-STRAND SELECTIVE MONOFUNCTIONAL URACIL DNA GLYCOSYLASEcoord: 130..344
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 22..364
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..12
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 13..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..19
score: 0.521

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig105contigF-serratus_M_contig105:435254..444738 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig105.515.1mRNA_F-serratus_M_contig105.515.1Fucus serratus malemRNAF-serratus_M_contig105 434420..444838 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig105.515.1 ID=prot_F-serratus_M_contig105.515.1|Name=mRNA_F-serratus_M_contig105.515.1|organism=Fucus serratus male|type=polypeptide|length=365bp
MQSLLVLLISAINPQISSSFATISAAVLPRSAAARLTHVSPEAAPVMSTS
TRIKKRPSRPGVSSECGPSAEPQPRQRRRLEEKAGLNPSDFGADAPSLET
SLTDPNNLIIASRRLHERLKGKTWKGTKKQPVACSYDVLEYAWDPYEAYT
RQYGGGRALGRALVVGMNPGPWGMVQTGVPFGEVDHVRDWLGVSGVVGRP
SEEHPKRPVEGFSCKRSEVSGKRLWGFFKRRFGTADAWGDKMFVYNYCPL
TFMSSSGGNITPDRLPPGEREVVEAACNDALVKIIAALRPRVVIGVGKFT
GAKCLEAMTAMGSGPRGGNVEVEVVVVNHPSPASPSGVKWERAAGMDELV
LGCSKCKEIDRFLG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036895Uracil-DNA_glycosylase-like_sf
IPR039134SMUG1