mRNA_F-serratus_M_contig105.515.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig105.515.1
Unique NamemRNA_F-serratus_M_contig105.515.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig105.515.1 vs. uniprot
Match: D8LKH1_ECTSI (Uracil-DNA glycosylase superfamily protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LKH1_ECTSI)

HSP 1 Score: 390 bits (1003), Expect = 3.200e-128
Identity = 193/289 (66.78%), Postives = 227/289 (78.55%), Query Frame = 2
Query:  323 RQRRRLEEKAGLNPSDFGADAPSLETSLTDPNNLIIASRRLHERLKGKTWKGTKKQPVACSYDVLEYAWDPYEAYTRQYGGGRALGRALVVGMNPGPWGMVQTGVPFGEVDHVRDWLGVSGVVGRPSEEHPKRPVEGFSCKRSEVSGKRLWGFFKRRFGTADAWGDKMFVYNYCPLTFMSSSGGNITPDRLPPGEREVVEAACNDALVKIIAALRPRVVIGVGKFTGAKCLEAMTAMGSGPRGGNVEVEVVVVNHPSPASPSGVKWERAAGMDELVLGCSKCKEIDRFL 1189
            +Q RRL+ + G      GA+A    T ++  + L+  SRRLH+ LK + WKGT KQPV+CSY+VLEYA +  EAYT++YGGGR  GRA VVGMNPGPWGMVQTGVPFGEV  VRDWL V G VGRPS+EH KRPV GF C+RSEVSG RLWGFF+RRFGTADAWGDKMFVYN+CPLTFMSSSGGNITPD+L P EREV++ AC +AL ++I+AL+P VV+ VG F G+KC EA+ A G     G  EVEVVVVNHPSPASP+GVKWE+A  ++ELVL  SK KEIDRFL
Sbjct:   34 KQGRRLKAEGG----SAGAEAGG-STLVSCGDELVRISRRLHDSLKDRKWKGTSKQPVSCSYNVLEYASETNEAYTQRYGGGRPFGRAFVVGMNPGPWGMVQTGVPFGEVGFVRDWLKVQGAVGRPSKEHTKRPVHGFDCQRSEVSGTRLWGFFERRFGTADAWGDKMFVYNFCPLTFMSSSGGNITPDKLTPAEREVIDEACGEALAEMISALKPSVVVAVGNFAGSKCHEAVKASGLN-AAGKGEVEVVVVNHPSPASPTGVKWEKATCLNELVLNSSKSKEIDRFL 316          
BLAST of mRNA_F-serratus_M_contig105.515.1 vs. uniprot
Match: A0A2A2QJU9_9BACT (Single-stranded DNA-binding protein n=1 Tax=Verrucomicrobiae bacterium Tous-C5FEB TaxID=1982331 RepID=A0A2A2QJU9_9BACT)

HSP 1 Score: 235 bits (600), Expect = 2.070e-69
Identity = 126/248 (50.81%), Postives = 158/248 (63.71%), Query Frame = 2
Query:  416 NNLIIASRRLHERLKGKTWKGTKKQPVACSYDVLEYAWDPYEAYTRQYGGGRALGRALVVGMNPGPWGMVQTGVPFGEVDHVRDWLGVSGVVGRPSEEHPKRPVEGFSCKRSEVSGKRLWGFFKRRFGTADAWGDKMFVYNYCPLTFMSSSGGNITPDRLPPGEREVVEAACNDALVKIIAALRPRVVIGVGKFTGAKCLEAMTAMGSGPRGGNVEVEVVVVNHPSPASPSGVK-WERAAGMDELVLG 1156
            + LI ++RRL   L G  +       VAC Y+ LEYAW  +EAY  +YG G+   R L +GMNPGP+GM QTGVPFGEVD VRDWLG+   V +P +EHPKRP+EGF+CKRSEVSG+RLWG F  RFG AD++  + FV NYCPL +MS++G N+TPD+LP  E + VE AC   L K+I  L P  +IGVG F   + + A  A GS       +  V  V HPSPASP+  + W  AA      LG
Sbjct:    2 SKLIASTRRLVSDLAGLEFGDL----VACVYNPLEYAWQAHEAYLSRYGSGKK--RVLFLGMNPGPFGMAQTGVPFGEVDAVRDWLGICEDVEKPLKEHPKRPIEGFACKRSEVSGRRLWGLFAERFGKADSFFKEHFVMNYCPLVWMSTTGANLTPDKLPASEMQPVEQACLKHLAKVIELLDPSYLIGVGGFAEDRLIRAAAACGS-------KATVGRVLHPSPASPAANRGWAEAATRQLTELG 236          
BLAST of mRNA_F-serratus_M_contig105.515.1 vs. uniprot
Match: W0J5I8_9BACT (Single-stranded DNA-binding protein n=2 Tax=unclassified Opitutaceae TaxID=278955 RepID=W0J5I8_9BACT)

HSP 1 Score: 230 bits (587), Expect = 2.070e-67
Identity = 126/250 (50.40%), Postives = 160/250 (64.00%), Query Frame = 2
Query:  422 LIIASRRLHERLKGKTWKGTKKQPVACSYDVLEYAWDPYEAYTRQYGGGRALGRALVVGMNPGPWGMVQTGVPFGEVDHVRDWLGVSGVVGRPSEEHPKRPVEGFSCKRSEVSGKRLWGFFKRRFGTADAWGDKMFVYNYCPLTFMSSSGGNITPDRLPPGEREVVEAACNDALVKIIAALRPRVVIGVGKFTGAKCLEAMTAM-GSGPRGGNVEVEVVVVNHPSPASPSGVK-WERAAGMDELVLGCSK 1165
            L+ A+ RL  +L+G T+      PV+ +Y  L+YAW P+  Y R+YG GR   R L +GMNPGP+GM QTGVPFGEV  VRDW+GV+G VG P  EHPKRPVEGF+C +SEVSG+RLWG F  + GTA A+    FV NYCPL +MS++G N+TPD+LP  E   V+AAC D LV++I AL P  +IGVG +   K + A   + G   R G V        HPSPASP+  + W  AA    + LG  K
Sbjct:    8 LVEAADRLRRQLRGATFSA----PVSHTYLPLDYAWAPHTDYLRRYGAGRK--RVLFLGMNPGPFGMAQTGVPFGEVAAVRDWMGVTGAVGHPVPEHPKRPVEGFACPKSEVSGRRLWGLFAEKSGTAKAFFRDHFVANYCPLVWMSATGANLTPDKLPAAEIAPVDAACLDHLVRVIEALEPEWLIGVGGYAEEKLVAAAARLPGKTFRTGRVL-------HPSPASPAANRGWSAAATKQLVALGVWK 244          
BLAST of mRNA_F-serratus_M_contig105.515.1 vs. uniprot
Match: A0A3R8ITW2_9BACT (Single-strand selective monofunctional uracil-DNA glycosylase n=2 Tax=Opitutaceae TaxID=134623 RepID=A0A3R8ITW2_9BACT)

HSP 1 Score: 228 bits (582), Expect = 1.080e-66
Identity = 124/246 (50.41%), Postives = 160/246 (65.04%), Query Frame = 2
Query:  422 LIIASRRLHERLKGKTWKGTKKQPVACSYDVLEYAWDPYEAYTRQYGGGRALGRALVVGMNPGPWGMVQTGVPFGEVDHVRDWLGVSGVVGRPSEEHPKRPVEGFSCKRSEVSGKRLWGFFKRRFGTADAWGDKMFVYNYCPLTFMSSSGGNITPDRLPPGEREVVEAACNDALVKIIAALRPRVVIGVGKFTGAKCLEAMTAMGSGPRGGNVEVEVVVVNHPSPASPSGVK-WERAAGMDELVLG 1156
            L+ A+  L ++L G  +      P A  Y  LEYAW P+E Y R+YGGGR   R L +GMNPGP+GM QTGVPFGEV  VRDW+G+SG VGRP++EHPKR +EGF+C +SEVSG+RLWG F ++FGTA+A+    FV NYCPL +MS++G N+TPD+L   E   V+  C   L K+IAALRP  +IGVG +   K  +A   +  G +G     +V  V HPSPASP+  + W  AA      LG
Sbjct:    7 LVEAADLLRQQLHGARFSA----PAAHVYLPLEYAWAPHEQYLRRYGGGRK--RVLFLGMNPGPFGMAQTGVPFGEVAAVRDWMGISGPVGRPADEHPKRRIEGFACPKSEVSGRRLWGLFAQKFGTAEAFFHDHFVANYCPLVWMSATGANLTPDKLSSSEIAPVDEVCLAHLAKLIAALRPEWLIGVGGYAEDKLTQAAARL-PGFKG-----KVGRVLHPSPASPAANRGWAEAATRQLTTLG 240          
BLAST of mRNA_F-serratus_M_contig105.515.1 vs. uniprot
Match: A0A3N5VL41_9BACT (Single-strand selective monofunctional uracil-DNA glycosylase n=1 Tax=Verrucomicrobiaceae bacterium TaxID=2026800 RepID=A0A3N5VL41_9BACT)

HSP 1 Score: 227 bits (579), Expect = 2.680e-66
Identity = 120/247 (48.58%), Postives = 154/247 (62.35%), Query Frame = 2
Query:  419 NLIIASRRLHERLKGKTWKGTKKQPVACSYDVLEYAWDPYEAYTRQYGGGRALGRALVVGMNPGPWGMVQTGVPFGEVDHVRDWLGVSGVVGRPSEEHPKRPVEGFSCKRSEVSGKRLWGFFKRRFGTADAWGDKMFVYNYCPLTFMSSSGGNITPDRLPPGEREVVEAACNDALVKIIAALRPRVVIGVGKFTGAKCLEAMTAMGSGPRGGNVEVEVVVVNHPSPASPSGVK-WERAAGMDELVLG 1156
            +LI ++RRL + L   T+      PVAC Y  L+YAW P++ Y  +YG  R   R + +GMNPGP+GM QTGVPFGEV  VRDWL +   V +P+ EHPKRPVEGF+C RSEVSG+RLWG F  RFGTADA+    FV NYCPL +MS++G N+TPD+LP  E   VE AC   L ++I  L+P  +IG+G F   + L A    GS       +  +  + HPSPASP+  + W  AA      LG
Sbjct:    6 DLIASTRRLCDALGDLTFAA----PVACVYRPLQYAWRPHQRYLERYG--RGPKRVVFLGMNPGPFGMAQTGVPFGEVAAVRDWLEIHEPVDKPAGEHPKRPVEGFNCTRSEVSGRRLWGLFAERFGTADAFFKDHFVLNYCPLVWMSATGANLTPDKLPAAEMAPVEDACLAHLAEVIGLLKPSFLIGIGGFAEQRLLRAAETSGS-------KAAIGRILHPSPASPAANRGWAEAASRQLAALG 239          
BLAST of mRNA_F-serratus_M_contig105.515.1 vs. uniprot
Match: UPI0019034DE8 (single-stranded DNA-binding protein n=1 Tax=Luteolibacter pohnpeiensis TaxID=454153 RepID=UPI0019034DE8)

HSP 1 Score: 227 bits (579), Expect = 2.770e-66
Identity = 118/248 (47.58%), Postives = 158/248 (63.71%), Query Frame = 2
Query:  416 NNLIIASRRLHERLKGKTWKGTKKQPVACSYDVLEYAWDPYEAYTRQYGGGRALGRALVVGMNPGPWGMVQTGVPFGEVDHVRDWLGVSGVVGRPSEEHPKRPVEGFSCKRSEVSGKRLWGFFKRRFGTADAWGDKMFVYNYCPLTFMSSSGGNITPDRLPPGEREVVEAACNDALVKIIAALRPRVVIGVGKFTGAKCLEAMTAMGSGPRGGNVEVEVVVVNHPSPASPSGVK-WERAAGMDELVLG 1156
            + LI A+R L + L+   +      PVA +Y  LEYAW P+E Y +++G G+   R L +GMNPGP+GM QTGVPFGE+  V+DW+G+ G VG+P+ EHPKRP+EGF+C+RSEVSG+RLWG F+ RFGTADA+ +  FV NYCPL +MS++G N+TPD++       VE AC   L   I AL+P  +IGVG F   +   A   +GS       +  +  V HPSPASP+  + W  AA    L  G
Sbjct:    5 SKLIKAARVLTDELRDLEFPA----PVAYTYLPLEYAWKPHEDYLKKFGSGKK--RVLFLGMNPGPFGMAQTGVPFGEIAAVKDWMGIQGEVGKPAHEHPKRPIEGFACQRSEVSGRRLWGLFQDRFGTADAFFEDHFVTNYCPLVWMSATGANLTPDKIAAASMVEVEGACLRHLASTILALQPEFLIGVGAFAEQRIRTAAETVGS-------KASIGKVLHPSPASPAANRGWAEAATKQLLAQG 239          
BLAST of mRNA_F-serratus_M_contig105.515.1 vs. uniprot
Match: A0A7W1F2J4_9BACT (Single-stranded DNA-binding protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7W1F2J4_9BACT)

HSP 1 Score: 226 bits (576), Expect = 7.120e-66
Identity = 116/253 (45.85%), Postives = 156/253 (61.66%), Query Frame = 2
Query:  404 LTDPNNLIIASRRLHERLKGKTWKGTKKQP-VACSYDVLEYAWDPYEAYTRQYGGGRALGRALVVGMNPGPWGMVQTGVPFGEVDHVRDWLGVSGVVGRPSEEHPKRPVEGFSCKRSEVSGKRLWGFFKRRFGTADAWGDKMFVYNYCPLTFMSSSGGNITPDRLPPGEREVVEAACNDALVKIIAALRPRVVIGVGKFTGAKCLEAMTAMGSGPRGGNVEVEVVVVNHPSPASPSGVK-WERAAGMDELVLG 1156
            + D   +I A++RL + L       T   P V+  Y+ L YAW  +EAY R+Y  GR   R + +GMNPGP+GM QTGVPFGE+  VRDWLG+   +GRP  EHP+RPV G  C RSEVSG+RLWG F+ RF +A+A+  + FV NYCPL FMS+SGGN+TPD+LPP  R+ +EAAC+  LV ++ ALRP  ++G+G F   +   A+               +  + HPSPASP+  + W   A    + LG
Sbjct:    1 MADARAVIAAAQRLRDELPP-----TPLPPLVSHVYNPLGYAWPMHEAYLRRYAAGRK--RVVFLGMNPGPYGMAQTGVPFGEIAVVRDWLGLDAAIGRPDPEHPRRPVTGLDCARSEVSGRRLWGLFRERFASAEAFATEHFVANYCPLVFMSASGGNVTPDKLPPTARKTIEAACDRHLVALVDALRPEWLVGIGAFAAQRAERALAG----------RARIGQILHPSPASPAANRGWAEQAQRGMVGLG 236          
BLAST of mRNA_F-serratus_M_contig105.515.1 vs. uniprot
Match: A0A831XLZ5_GEOME (Single-strand selective monofunctional uracil-DNA glycosylase n=2 Tax=Geobacter TaxID=28231 RepID=A0A831XLZ5_GEOME)

HSP 1 Score: 226 bits (575), Expect = 9.050e-66
Identity = 113/215 (52.56%), Postives = 149/215 (69.30%), Query Frame = 2
Query:  491 PVACSYDVLEYAWDPYEAYTRQYGGGRALGRALVVGMNPGPWGMVQTGVPFGEVDHVRDWLGVSGVVGRPSEEHPKRPVEGFSCKRSEVSGKRLWGFFKRRFGTADAWGDKMFVYNYCPLTFMSSSGGNITPDRLPPGEREVVEAACNDALVKIIAALRPRVVIGVGKFTGAKCLEAMTAMGSGPRGGNVEVEVVVVNHPSPASPSGVK-WERAA 1132
            PVAC Y+ L YA +P+ AY  ++G        L+VGMNPGPWGM QTGVPFGE+  V +WLGV+G V RP++EHPK+ V+GF+C+RSEVSG+RLWG  + RFGT + +  + FV NYCPL F++  GGNITPD+L  GE+E + AAC+ AL + +  LRPRVV+GVG F   +C EA+  +       NVEV  ++  HPSPASP+  + W  AA
Sbjct:   23 PVACVYNPLVYAREPHAAYLSRFGSPPK--EVLIVGMNPGPWGMAQTGVPFGEIGVVAEWLGVTGTVTRPADEHPKKRVDGFACRRSEVSGRRLWGLVRERFGTPERFFARFFVANYCPLLFLTVDGGNITPDKLRRGEQEPLFAACDRALRRTVDLLRPRVVVGVGGFAEGRCREALAGL-------NVEVGRII--HPSPASPAANRDWAGAA 226          
BLAST of mRNA_F-serratus_M_contig105.515.1 vs. uniprot
Match: UPI00145ECE39 (single-stranded DNA-binding protein n=1 Tax=Aromatoleum diolicum TaxID=75796 RepID=UPI00145ECE39)

HSP 1 Score: 226 bits (575), Expect = 1.060e-65
Identity = 118/249 (47.39%), Postives = 159/249 (63.86%), Query Frame = 2
Query:  413 PNNLIIASRRLHERLKGKTWKGTKKQPVACSYDVLEYAWDPYEAYTRQYGGGRALGRALVVGMNPGPWGMVQTGVPFGEVDHVRDWLGVSGVVGRPSEEHPKRPVEGFSCKRSEVSGKRLWGFFKRRFGTADAWGDKMFVYNYCPLTFMSSSGGNITPDRLPPGEREVVEAACNDALVKIIAALRPRVVIGVGKFTGAKCLEAMTAMGSGPRGGNVEVEVVVVNHPSPASPSGVK-WERAAGMDELVLG 1156
            P +LI A+R L   +    +      PV+  Y+ L+YAW  +E Y R+YG GR   R + +GMNPGP+GM QTGVPFGE+D VRDWLG++G VG+P+ E+PKRPVEGF+C RSEVSG+RLWG F+ RFG+A+A+  + FV NYCPL F    G N+TPD+LP  E + + AAC++ L +++ AL P  VIG+G +   +  EA+   G         V +  V HPSPASP+  + W  AA      LG
Sbjct:    6 PTSLIAAARALSHTVDAMRFAA----PVSHVYNPLDYAWAIHEHYLRRYGAGRK--RVVFIGMNPGPFGMAQTGVPFGEIDTVRDWLGLAGAVGKPATENPKRPVEGFACARSEVSGRRLWGLFRERFGSAEAFFAEHFVANYCPLAFFDG-GRNLTPDKLPAAESQPLLAACDEHLRRMVEALAPEWVIGIGAWAENRAAEALAGRG---------VRIGRVLHPSPASPAANRGWSEAASRQLAELG 238          
BLAST of mRNA_F-serratus_M_contig105.515.1 vs. uniprot
Match: A0A3N1Y1S4_9GAMM (Single-strand selective monofunctional uracil DNA glycosylase n=1 Tax=Inmirania thermothiophila TaxID=1750597 RepID=A0A3N1Y1S4_9GAMM)

HSP 1 Score: 225 bits (574), Expect = 1.490e-65
Identity = 117/250 (46.80%), Postives = 156/250 (62.40%), Query Frame = 2
Query:  416 NNLIIASRRLHERLKGKTWKGTKKQPVACSYDVLEYAWDPYEAYTRQYGGGRALGRALVVGMNPGPWGMVQTGVPFGEVDHVRDWLGVSGVVGRPSEEHPKRPVEGFSCKRSEVSGKRLWGFFKRRFGTADAWGDKMFVYNYCPLTFMSSSGGNITPDRLPPGEREVVEAACNDALVKIIAALRPRVVIGVGKFTGAKCLEAMTAMGSGPRGGNVEVEVVVVNHPSPASPSGVK-WERAAGMDELVLGCS 1162
            + L+ A+RRL   +    +      PV   Y+ L YAW P+EAY R+YGGG      ++VGMNPGPWGMVQTG+PFGEV  VRDW+G+   VG P   HP+RPV GF+C+RSEVSG+RLWG+ + RFGT D +  + FV NYCPL F  ++G N TPDRL   ER  + AAC+ AL + + AL PR+V+GVG+F  A+  EA+  +G+          +    HPSPASP   + W   A + +  LG +
Sbjct:    6 DRLVAAARRLAGEVDALRFG----PPVTHVYNPLAYAWAPHEAYLRRYGGGPK--EVVLVGMNPGPWGMVQTGIPFGEVAAVRDWMGIEAPVGAPPRPHPRRPVLGFACRRSEVSGRRLWGWARARFGTPDRFFARFFVLNYCPLAFFEAAGANRTPDRLRADERRALFAACDRALREAVHALAPRLVLGVGRFAEARAREALRGLGTA---------IAAAPHPSPASPQANRGW---APLMDAALGAA 237          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig105.515.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LKH1_ECTSI3.200e-12866.78Uracil-DNA glycosylase superfamily protein n=2 Tax... [more]
A0A2A2QJU9_9BACT2.070e-6950.81Single-stranded DNA-binding protein n=1 Tax=Verruc... [more]
W0J5I8_9BACT2.070e-6750.40Single-stranded DNA-binding protein n=2 Tax=unclas... [more]
A0A3R8ITW2_9BACT1.080e-6650.41Single-strand selective monofunctional uracil-DNA ... [more]
A0A3N5VL41_9BACT2.680e-6648.58Single-strand selective monofunctional uracil-DNA ... [more]
UPI0019034DE82.770e-6647.58single-stranded DNA-binding protein n=1 Tax=Luteol... [more]
A0A7W1F2J4_9BACT7.120e-6645.85Single-stranded DNA-binding protein n=1 Tax=Planct... [more]
A0A831XLZ5_GEOME9.050e-6652.56Single-strand selective monofunctional uracil-DNA ... [more]
UPI00145ECE391.060e-6547.39single-stranded DNA-binding protein n=1 Tax=Aromat... [more]
A0A3N1Y1S4_9GAMM1.490e-6546.80Single-strand selective monofunctional uracil DNA ... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig105contigF-serratus_M_contig105:434420..444838 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score393.3
Seed ortholog evalue1.3e-106
Seed eggNOG ortholog2880.D8LKH1
Preferred nameSMUG1
KEGG koko:K10800
KEGG Pathwayko03410,map03410
Hectar predicted targeting categorychloroplast
GOsGO:0000702,GO:0000703,GO:0003674,GO:0003676,GO:0003677,GO:0003697,GO:0003824,GO:0004844,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005730,GO:0006139,GO:0006220,GO:0006244,GO:0006259,GO:0006281,GO:0006284,GO:0006285,GO:0006304,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009117,GO:0009166,GO:0009219,GO:0009223,GO:0009262,GO:0009264,GO:0009394,GO:0009987,GO:0016787,GO:0016798,GO:0016799,GO:0017065,GO:0018130,GO:0019104,GO:0019438,GO:0019439,GO:0019637,GO:0019692,GO:0031974,GO:0031981,GO:0033554,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0045008,GO:0046386,GO:0046434,GO:0046483,GO:0046700,GO:0050896,GO:0051716,GO:0055086,GO:0070013,GO:0071704,GO:0072527,GO:0072529,GO:0090304,GO:0097159,GO:0097506,GO:0140097,GO:1901135,GO:1901136,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1901576
EggNOG free text desc.single-strand selective uracil DNA N-glycosylase activity
EggNOG OGs28KKK@1,2QT20@2759
Ec32 ortholog descriptionUracil-DNA glycosylase-like
Ec32 orthologEc-16_002940.1
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03400
Exons7
Model size2029
Cds size1095
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928876.427211-UTR-F-serratus_M_contig105:434419..4352531622928876.427211-UTR-F-serratus_M_contig105:434419..435253Fucus serratus maleUTRF-serratus_M_contig105 434420..435253 -
1690962610.8066938-UTR-F-serratus_M_contig105:434419..4352531690962610.8066938-UTR-F-serratus_M_contig105:434419..435253Fucus serratus maleUTRF-serratus_M_contig105 434420..435253 -
1622928876.5536208-UTR-F-serratus_M_contig105:444738..4448381622928876.5536208-UTR-F-serratus_M_contig105:444738..444838Fucus serratus maleUTRF-serratus_M_contig105 444739..444838 -
1690962610.928376-UTR-F-serratus_M_contig105:444738..4448381690962610.928376-UTR-F-serratus_M_contig105:444738..444838Fucus serratus maleUTRF-serratus_M_contig105 444739..444838 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928876.4405816-CDS-F-serratus_M_contig105:435253..4354301622928876.4405816-CDS-F-serratus_M_contig105:435253..435430Fucus serratus maleCDSF-serratus_M_contig105 435254..435430 -
1690962610.8329923-CDS-F-serratus_M_contig105:435253..4354301690962610.8329923-CDS-F-serratus_M_contig105:435253..435430Fucus serratus maleCDSF-serratus_M_contig105 435254..435430 -
1622928876.460302-CDS-F-serratus_M_contig105:435622..4357491622928876.460302-CDS-F-serratus_M_contig105:435622..435749Fucus serratus maleCDSF-serratus_M_contig105 435623..435749 -
1690962610.8557696-CDS-F-serratus_M_contig105:435622..4357491690962610.8557696-CDS-F-serratus_M_contig105:435622..435749Fucus serratus maleCDSF-serratus_M_contig105 435623..435749 -
1622928876.4789596-CDS-F-serratus_M_contig105:435989..4360621622928876.4789596-CDS-F-serratus_M_contig105:435989..436062Fucus serratus maleCDSF-serratus_M_contig105 435990..436062 -
1690962610.8782554-CDS-F-serratus_M_contig105:435989..4360621690962610.8782554-CDS-F-serratus_M_contig105:435989..436062Fucus serratus maleCDSF-serratus_M_contig105 435990..436062 -
1622928876.4949782-CDS-F-serratus_M_contig105:436314..4363781622928876.4949782-CDS-F-serratus_M_contig105:436314..436378Fucus serratus maleCDSF-serratus_M_contig105 436315..436378 -
1690962610.8931608-CDS-F-serratus_M_contig105:436314..4363781690962610.8931608-CDS-F-serratus_M_contig105:436314..436378Fucus serratus maleCDSF-serratus_M_contig105 436315..436378 -
1622928876.5124607-CDS-F-serratus_M_contig105:437118..4372501622928876.5124607-CDS-F-serratus_M_contig105:437118..437250Fucus serratus maleCDSF-serratus_M_contig105 437119..437250 -
1690962610.9013712-CDS-F-serratus_M_contig105:437118..4372501690962610.9013712-CDS-F-serratus_M_contig105:437118..437250Fucus serratus maleCDSF-serratus_M_contig105 437119..437250 -
1622928876.5249474-CDS-F-serratus_M_contig105:439106..4392671622928876.5249474-CDS-F-serratus_M_contig105:439106..439267Fucus serratus maleCDSF-serratus_M_contig105 439107..439267 -
1690962610.9096694-CDS-F-serratus_M_contig105:439106..4392671690962610.9096694-CDS-F-serratus_M_contig105:439106..439267Fucus serratus maleCDSF-serratus_M_contig105 439107..439267 -
1622928876.5368433-CDS-F-serratus_M_contig105:444377..4447381622928876.5368433-CDS-F-serratus_M_contig105:444377..444738Fucus serratus maleCDSF-serratus_M_contig105 444378..444738 -
1690962610.919273-CDS-F-serratus_M_contig105:444377..4447381690962610.919273-CDS-F-serratus_M_contig105:444377..444738Fucus serratus maleCDSF-serratus_M_contig105 444378..444738 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig105.515.1prot_F-serratus_M_contig105.515.1Fucus serratus malepolypeptideF-serratus_M_contig105 435254..444738 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig105.515.1

>prot_F-serratus_M_contig105.515.1 ID=prot_F-serratus_M_contig105.515.1|Name=mRNA_F-serratus_M_contig105.515.1|organism=Fucus serratus male|type=polypeptide|length=365bp
MQSLLVLLISAINPQISSSFATISAAVLPRSAAARLTHVSPEAAPVMSTS
TRIKKRPSRPGVSSECGPSAEPQPRQRRRLEEKAGLNPSDFGADAPSLET
SLTDPNNLIIASRRLHERLKGKTWKGTKKQPVACSYDVLEYAWDPYEAYT
RQYGGGRALGRALVVGMNPGPWGMVQTGVPFGEVDHVRDWLGVSGVVGRP
SEEHPKRPVEGFSCKRSEVSGKRLWGFFKRRFGTADAWGDKMFVYNYCPL
TFMSSSGGNITPDRLPPGEREVVEAACNDALVKIIAALRPRVVIGVGKFT
GAKCLEAMTAMGSGPRGGNVEVEVVVVNHPSPASPSGVKWERAAGMDELV
LGCSKCKEIDRFLG*
back to top

mRNA from alignment at F-serratus_M_contig105:434420..444838-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig105.515.1 ID=mRNA_F-serratus_M_contig105.515.1|Name=mRNA_F-serratus_M_contig105.515.1|organism=Fucus serratus male|type=mRNA|length=10419bp|location=Sequence derived from alignment at F-serratus_M_contig105:434420..444838- (Fucus serratus male)
AACAGAGTCTCCTTGGTTTTGGTGTAGTTGTTGGAGGCCATACCGCCTAG GCAATGCCCCCCCGAGCAACACACCCTAGTCGCTCAATCCCGATTGGCAG ATGCAGTCGCTTCTGGTGCTACTTATCTCCGCGATCAACCCACAAATCTC ATCTTCCTTCGCCACTATCTCTGCAGCTGTATTACCGAGGTCTGCAGCTG CCAGACTGACCCACGTTTCTCCAGAAGCTGCCCCTGTTATGTCTACAAGT ACTCGAATAAAAAAGCGACCATCAAGGCCCGGAGTTAGCAGCGAATGCGG GCCTTCGGCGGAGCCCCAACCTAGACAAAGAAGGCGTTTGGAAGAAAAAG CAGGGCTAAATCCTTCAGATTTTGGAGCAGATGCTCCGTCGCTCGAGACT TCGTTGACGGATCCCAACAATCTCATTATCGCATCGCGACGGCTGCACGA ACGGCTCAAAGGTGATTCACGAAGTAGTGCAAGTTTTATATTTTTACGCA GTGCAATCTTGCTTTCATGAAAAGCTGTACTCTACAGGCTGGGCTGGCCA AGACGCTGTACACATGGCGGAATGGGATTTGCCACGCGGTTTTTACGAAT TTTCACCAGAAATTTTGACACGTGATTTAGACCGCTCTTGCGGAGAGGTC CACCCCTGCACATTTTGGTTTTAGTTTTTTTTCCGTAAGTTATGGTATGA TAGCCGGATATAAGTGAATGTGGGAATATTTGTTTCGCGACGAAATGATG GAAAAAATAAAAATAAATGTGCAGGGGTGGTCCTCTCCGCAAGAGCGGTC TAAATCACGTGTCAAAATTTCAGGTGAAAAATCGTAAAAACCGCGTGGCA AATCGCGATACCCCCACATTTCCTCAGTTCACTTGTGTTTTGTATCGGAA TCTTTACGAGGCCGCAACTCTTGATAGAAAACGAGGCGAGCCTTGTAACT ACCACCCACGCTCTTGCGGTGCTCCTGGATACGTGTACAACAATTTTAGT ATAGGAAGTATCCTCCACTACGCCGCCAATTGGTCATTGTTTACCAAAAT CAACTCGGATTCGAAAAATTCCGGCGCCTGCGCTTCCCTTTTTGCCGTAT GGGAGCAGCCTCCGAATTTCAAGCTTTAACTCGTAGAAACTGCAGAGCGA GACATGAACGAACAGAAGTCAGTTTCTTGGCCAGCCCAGCTTGTATTTAC AAGATTACCTCAGCCCCTGCACTTCAAACCCAGTTGTACACAGACAGTAG TAGTAAGACTACAGATTTTTAGTTAGAGTTGCATATTTTTGGCACTTTTA TTTTGTGCGCGGGCACTCATTGGCCGAACTGACGGAGTATGATGACAGTG CTGCTGATATCATCTTACACTGTTGTCTGTAGTATGTAGAGCTATACATA TATGTACTGCTGCATTCATAGGACATAATGTGTACCGATAATGAATGGAC GCCGCCGCGGAACTCGGGAGGAATCCCGTAAGCAAGCACTAGATTCAGCC TGGAGTACAGTATGGAGATGAGCCGGCTGACGCGAGATGGGACCGCCGAA CCCGTCTCGCGAGACCAAATTCTCAGGCGCGAACGGGGACGACAGCGAAA AAATTATTTTCCCTGTATATGCATATCATACAGCAGTTAACCGTGCACGA ATGTACTCGTCCCAAAATAAGAAATATACCTGGTATATAGACCAATACAA CAGCAGTACTGTACCAGTACATCTTATGTACTTACCACGGATGCATCTGC AAGAACACTTGATTTCCCTGTTGGTCCATATTACTCTGCTATAACTAAGT GGTGACCGTACTTATTGGCTCTATACATAAATACATATAATCAGCAATAG TAGTACCTGTCGGTTGTACTGATGCTAAATTCCATTGTTTTTTCTTGTAT GGATGTATTTCCACCGGACTACAGTACAGCAGTTATGTCGATTTTGTGAG GATTTGTACAAAATATCGAGTGTGATCTCTCCACGCGGATTTCAGAAACG AATAGCGCCGACTTTTGATGGTGCCCGGGCTGAGACAGAAGCGTAAAACG CCCAGATATATTTGAGCGATGACCGTAATTGGTTGGCGAGTGTGTGCATC AAGCACGGTGTCTTCCAGTCGAGGCAAGTTTACCAGTACTAGGTGTAATA GTACTTCGAAGTATCTTTCATACCCACCTACGTACCTTACCTTTCAAGCT TTCGTTCTACAGTTATTTTTAGTACAAAGCACTATTTCCCCAACCCGCGT GGTGTCCTCTTCTTCCGTGTCTGTGAAGAGGATCTTTGGTTACCGCACTC GTCTCTTTCAAACCCTCGTTTCCACTCTCATTTAATTTAATGTCGTTGGA CCCTAGAGGGCCTCCCCTAACTCGATTATCACCTCTTTTTCTTTGCGGAT CTCACGGCACAGAAAATCCACAGAAATCGTGATTTCCGTTTCCCATAAAG TGGGGTCACATAAAGCAAAACAAAAAAAATGGACAGAAATTGTGATATTT TCGTGTTTCTCTTCTGACTTTTGATTCAGAGACGGTTTTATGGCAGACGG TTTTTTCGAGTGTGATCAGCTGCGTGACTCGTTCGCGCGGCTCGGAGAAG TTTAATCAAATCAATTGACTATGATGTACTTCAGTACCACATAGGCTTTT ACCCATTCTGCTCGCAGAAAAAAGAGCAGATTGGCACGTTTAGTCATGCT CGAGCAGAACTAAAAGCAGATCCGAAAAAAGAAGCAGAACCAGATCTGCT CCAAGCATTTCCAGAAAATCAGAAGCATAGCAGTATTATAAAGAGCATAT CTAGTATATGACGAGCAGATCGAGCATATAGTGGCTACGCTGCTAGCACA TCTACTTCAATTTTGTGCAATAAGACTCCGGGCACCTCCGCAAAGTGTTT AAATAGGTGATTATCAGCATAATTTGGAGACAGACATAACGACATAACCA CAAATACACAATATATACCATATAAAAAAAAATTGAAAAAAAATTTGAAA AAAAAATTTGAAATGTTTTTGAAATGTTTTTTTGAAAAAAACACAACGAG CAGAAATCGAGCGGGCAATGACAAAAATAGGAATAATTGGCACATTTTAG CGAGCAGAAGTGGAGCAGATCCGCCCGAAATAGCCCGAAATAAGCAGATG TTACGAGCAGAAATGCATCCTGAAAGCAGTGCTCGGCCCAAAAAAGGAGC AGAAAACACAAAAAAAAAAAAAGCAGAATGGGTAAAGGCCTAGTACCACA CACTACTGTTGTTCTTTGTAATACTGTTATGTCTTTGTACTGTACATACT CCTGTTACAAAAGTTGTGGTAAACAAAACGGGTGCTGTCTGTTCGGGAAA ACCTATGAACCAATTTTCGTGCCCCCCCTCTTAGTACAGTACAGAGGACA TGTGCGATGCAGAAAGACTGTATCGGAGAGGTGCCACATTCTGTAGACGT AGAAAAGGCCAGCATGGGAGCAGGTGACCACTGAACCGATTACGCATCAG CAGGTACAGACGGCAGTAGCTGTAGCTGTGTGTCAAGTGAGCCACTCACA CTCGAAGCGGAAAGGTGAGAGCGTGCGCGTGGTCGAGAGAGGGCTGACTC CCCGTAGATATTCCTGTGCACCGACAAAACCATGGCTCGGACTGATCTCC ACTCGTTATTCGGGCTCGTCTGCCGAAGCATTCTCGACCGCGGTGCTCCG TGTAATTTGACCGGGGGATCACAAGCATCAATATGGTGTCTGCTTCACAT GCCCTAAACGCCCCCAAACCATGTTTCGCCCCCGTCGCCAAGCATCTCAA AGACTTCAAACAACGCCGCCACCGTGATGACCACGGTGCGTAAAAGCTGT CATGTTTGCGCCTGCCGCATTTGGTCCATGGGGTACACTAAGTAGGCAGC ACCCATTACTCGACCTAATCTGAGAACTACTGGCCCTGTGTCGGCGGGCT CTCATGAGTACGCCACTGCGTGACCTGATGACCTCGGGAATGACCCGATG GCAGTCGGCGGTATACATATGTGTGACCATGCATACATCGACACCCTCGC GGAAAGCAGGAATGATAGGAGCCCGTGAGTAAGGACCAAGTTCAGCGTGG AGGTGGAGAATGAGCGGGCTGAGCCGGGACGGGACGGCCGAACCTCTTTC ACGAGACCAAATTCTCAGGCGCAAACGGGTGGGCATGGAAAGTTCATGTG ACCACGAGCAGGATTGGCAACCATATCCGGCTGATCCATACTCTGCTACA TATAATGAATGAAAGCGACGACCAACCACACCAACAACATCCAGTTTTCC GAACAAAGTACGATGACTGTAGTCAGTTTGTACTCTAGTCTCCGAGGACA ACGTTAAATTCAAAGCAAACACAGATCACCATCACCATCAGCTGTGAACA GCGTATGAGCCGTTCGTCGCATGGAGGGGAGGGGATGTCCTAAAATTGTC CCCGAGTTCAGGGGGGACGTCACGGGAAAAGTTCTTCGACGGACACATCT GACCAAACCCCTCTTTGAACATGAGTTGAGTTCGCGGCAAACTTGCCTAA TCGATCATGTAGGGGATCATGCACTCCCATCCCCGGAAGGGCTGTTTTGG TGACATCCCCGGAGACGGGTTCGACGATTCCCCCCTCTACCCCCCCCCCT ATCCCCCATTCGTTAAACGATTCGTATGAGGGATCAGAAGGGGAGAGGAT AGTACATGCCCTCGTGCAGGGGGCATCTTTTTGACGTTCGATTATATAGG TATTTATCCTGCGCAATGGCGAATGACAATGGCTGCTTGACACTGGCTGC TTTTGCTGGTTTGAGAAGCTTTCGACAGAGGTTGAGCTCTCCTGATTGCA GAGAACGTAAAAGCCTTCGTTAAGTTCTTTCCTGTGCGGCCGACCTACCG GACCGAGGCGCAAACACCGACCCGTCGTAAAAACGCTCCAAGCCGTCGTA AAAACGCATCGACACTGTCAGTCCGAATTCCTGATATGCGGCAGGTATCA CATCCATCATCCTGGCAAGCCCACGCAGCGATGTCGACGCCACCCCCGCA TCGTCTGCATGCAGTATCCCATATACCGCTTGCAGAACCATTTTCAGAGT TCCCTCCCTGGGCATGCCATCCGTGCCTTTTGGCACATCATCGAGGTACA CCAAGTCTGAGACGATCACCGGGTCCGCCGTGAACCGCTGCGGAAGCACT ATGATGACCGCCCCAAAGAAAATGTTGGACAAAAGTGGCGCTGGTACGCA TCCTTGCCGAAGGCCCTGGCAGACATTGAACCACGCCGAGAAGTCTCCAT CATCCAGCTGTACGCGAGCCCGCATACCATCGTGGAACATGCGGATGACC TTCATCATCCGAGGCGTGCGCAAGAAATTTCGTAAGCTCGGGTCAAGATA GTTGTGCGAGTCAACATATGGTGTTAGACGGAGCGCGTCTGCAAAAACCA CCAAGGTGTTGACAGCCTTGCTGAAGACCGTCGATCTCCACCCCACTAAT ACAATATTCCTCCACCGCTACCTCTGCCCTCTGTCCGTCGACGCCCTGTC AACCGTCATCGCTTCACGAAGGCAAGACCTGGAAGGGCACGAAGAAGCAG CCCGTGGCGTGCTCGTACGACGTGCTAGAGTACGCCTGGGATCCCTACGA GGCCTACACTCGGCAGTACGGCGGGGGCAGAGCACTTGGTCGAGCCCTTG TCGTGGGCATGAATCCCGGTCCGTGGGGGATGGTGAGTATGTATGTATGT ATGTATGATAGTCATCACTTATATAGCAGATTTTGTATCAATCGGTATGG TTGCCAATCCTGCTCGTGGTCAGCTGACTAGGTAAAACGTTTTTTTCCCT GTTCCCGTTCGTGCCTGAGAATGTGGTCTCGTTAGACAGCTTCGGCCATC GCGTCCCGCGTCAGCCTGCTCATTATCCATCGTCAGACTAAATCGAATGC TTACTCGCGGGGTTTTTCCGCTTTCCACGACGGCATCTATAGTCTAGCGG TCGTCGACCTAACGCTTGAGCAAGCAAGCAGTGCGCATGAGTCTGTTGTC GAGAGTCCTCGAGGGCAAAATCGTTGGAAGAAAGCGATAAACAAAATGTA TCTGCTTGTTGGCGATCTTGCGTTCCGACCAGCGCCTCTTGGTGTACGGT GCGGCGCTATGCAGATGCGTGCGCGCTGTAGCTCTTTGAGGCGCGGATTC GACGGCTTCGTCGACGTTCAGACTCGTGCCTTCGAGCACACTAAAGATGC TATTCTTTATCACTGTCATTTTGGCGAGAGAAAGACGGGTTGATTGGTGG TATCATAGTACAGAAAAAATAATCTGATGTATAAAAACAGCATTTTTGTC CACCCTCCACCCTCGTCTTCATTTCAAGATACTTGTTTATATTGCGATCT TGGAACCAAAAGCTGGTGGTCGGAGAGAGGTAAACATACACTGTAGACTG TACTATAGACGGTTTTGACTCGCCCTCGCCTTCTTTGTCCTAGTATTGTG ACCCTTTTGAGAAAAAGCAAGTTGTGATGGAAAATGTAACGGCAAATAAA TGATGATCAAAGAACAAAGCGGCAATCAGTTTCCTACCGTAATTTCTACT TCCACGTGCCTTATCTACCTCCAACCCTTCGAATCGAGTGTATCTACGGC CATGGCAATATTCCACGGAATGTACACGATACAAGGCCTTCCACGAAGCT TTGTAGTAAGGTCTTCTTAAGTTCGCATGTATGCTATGATAGTGCCTCTA CACAAAGGAGGAAGATTGTACTACATGGTACTAAAAGTGAGATGTTTTAT TCTACGTTGGACCTGGCAAGGGTTTTGTCGCGATTGGAATCCCTGTTAGT TTGAGTATCGGGTTGTCACCATGACGTGGCCCGTTGACCTTCGTACCTCT TTGTGACCACGAGCGAGACTGGCATTTGATAGGTCTAAGCTGACTTGCTG TATCACCGTAGTTTCTTCGGTTGCAAGGACAATACGCTGGATGTGTGAAT CAACAACATTAGCAACTGTTGCTTTAGAGTGCTGTGTGTGCTGCACTGCC ATAATTGCCGCTTTTGTGTACTGCCTTTTTGTTTTTTTATGTACAAACAT GATCTTGGACCCATGGATCTACACGCCACTGGCGCCACCAGAATGCTTGA AGTAGGCTCTTTTGTCTAGGTAGTGCTGTCAAGCCGGCAGCTTTTTTGTC TTGTTCACACGGTAGTTCCTCCGTTACAAAGGAAGGGTTATGACCCTGGT TGGTACACCGCACCCACACCACCATATCTCAGAGTTGCGGACACGACATG CTGTAAACAATGCTTGCCCTGCTTGCCTTTGGTATGGAGATCCTTCGCCT ATACGTCGCGCCGGTGTGGGCTCCTGTTCCAGGGGACCAGGGCGTTCAGG AGGAATTTTGTCGTTGTCCAAGGTCCCCGGTTTCTCCGGCCTACTTACTG CAAACAAAGCCTCGGCTGTACATACTAATCCATATTTTTCTTACCAATTG CAGCATTGGTGTGTAGTTTTCCACCTCTTCGTCGGGGCCGTCGTGGGCCC CTTGCCCTATTTTGTCCACCGCGTGTTTTTGCTCTCAGGTGCAAACGGGA GTTCCCTTCGGCGAAGTAGATCACGTCCGAGACTGGTTGGGGGTAAGCGG AGTGGTGGGACGTCCGAGCGAGGAGCATCCCAAGAGGCCGGTGGAGGGCT TTTCTTGCAAGCGGAGCGAGGTGACACGGCTCGGATTCGGTTGGGTTTCG CCCCTGTGTTGCTCAGCTTCCTATAGGCAAGGCTGAGTCGCCAATCGTAT TTTGCCGATAAAGAGACAACGCGCTGCATCCCTACAGGCTCCGAGCTGAA GACTTGAGCTCATGTGTTTTGCTGTCTTTCTAAGAGCCTTTTTTTTCTGC GTGTACCACTGAAAGTGTCTCTTTTTCGTTCGCAAGTGTTAACCATATTC ATTTGCGTCCTCTATCAATAAATATCTATATTAACGGTGGTAACGGCTAC TCTCGAGTACGCTTAAGCCTTACACTTGTATGAGAACGCCTCCTTTGCTC TCCTATCCCTCATCGGGGAGAAAAGCCCTTCCATTTCTTTATAAAAAAAT TACGAAGAAAATGGTTGGTAAAGGCCTTTTTCTGATACTTCAAAATTGTT TTTCCAGACGATTTGTATGATAGCAACGCAGCCCCGATTTTCCTTGCGTT TACGGAGAAAAGGGTCTTATGTTCATGTGTGTGTGTTGGAGGGGGTGCAG GGGGGTGGTGATTTTTTCTCTGTTAGGGGAGGCATTCTCCAAGAACCATA CAGCCACTGAAGCTTCGGTATAAAGGTCGCGTTGATGAAGGCGTCAAAGG TGTGGTGACCTAACTCGCCTGGACATCCACGGCGTGGCCGTATCCCGGAG AGCCTTGTGAATGTTTGGCTATAGCGTTTCGCCATTGCTGCCGGGCGCCT TTCTTTCAAGGTCAGCGGGAAGCGCCTCTGGGGATTCTTCAAGCGAAGAT TCGGGACGGCAGACGCGTGGGGAGGTGGGTGGGTGGTGCAGCTTCCGCTC ACGTCACCCGACACTCGCTCGTGACGCGAATCATCCAAAAACTATCTGTA GGGCGTCACACTCCCCGATCGAAGATGCATGCCGCCCCGAGCGGCGACAA TCCCTTGGCGCTTTTCCAACCAGAAAGTGTTAACGCTTGTTTCTATCCCT TCCTCGTCCCGTGCCTCGCCATCATTTATTTGACCTCGTGTCTAATGTTT TTATCTTTCTTTATCCTTGCTTACAGATAAAATGTTCGTGTACAACTATT GCCCCCTGACGTTCATGAGCTCTTCTGGTGGGAACATTACCCCCGACAGG TGAACGATCCGCTGACCCGGAAGTGTTCTACGTTCGCCCCACCGTCGCAG GCGTGTAGATGTGCCCGAACACAGATCAGTATCGATCATGGTCGACGTGC AGCCACCCGTAGAACTGGGCGTAGCATGCGAGTCAACTCCAGCGGAATAA GACTTACATTGTCTCCGTAAGTTATGCTCACAAAATTCCCCTCACACGCC GCATTCCACTGCTCCACCGCCATGACTTGTCCGGAGAAGGTTGCCGCCAG GCGAGCGTGAGGTCGTGGAAGCAGCGTGTAACGACGCCTTAGTGAAGATA ATAGCGGCGCTGCGGCCGCGCGTTGTCATCGGCGTCGGAAAATTCACCGG GGCCAAGTGTCTTGAGGTACTGTATGTGGTGGCGTAGACTTCCGTCGCTG GTATCTTCCCTTATGTTTGATATGATAGGGCACTCCCTATTGTAAATGTA TTACAACAGGTGTAGTAAGTTACCCTCTTTGCCGTGTTGGCTTCAGGCAC AGAACCGTTTGGTGTTAACCAACTCAGCACTCCTTCCGTCCGGTACTTCA CGTTGCAGGCGATGACTGCCATGGGTTCAGGGCCCAGAGGGGGCAACGTC GAGGTGGAGGTTGTCGTGGTGAACCACCCGAGCCCGGCAAGCCCCAGTGG GGTTAAGTGGGAGAGAGCAGCCGGTATGGACGAGCTTGTTCTCGGCTGCA GCAAGTGCAAGGAAATAGATCGTTTTCTTGGATAGAGGAGTGTCTCAAAA CGAACAATGAGTTAGTCGTTCATCGTCGCTCAAATCTGTGCGTCGGTTCT ATAGAGTGCAAGATCGCGCCGGAAATTCATGATACGGCTGGACATTTATG TGGCTTTCCTGCCTCCTCGGTTCTGCTTTGTTCGAATTGCGGTGATTTTT TCGACTGGCGTATCGATATCGATGAATGGCGTCGGAAATTACCAACGTCT GGTCCTGTACGAAGCAGTAAATACATCGGCAGACTCGGGGGGCTTCTCTC CTTGAAGGACCACTAATTAGCAAAGGAATCGGTCGGACTATTCGAAGTCG ATAAACTGGACTATTGTTGAGGCAAAACTGATCGGGGGGCACTATCTTGT TGATATGCTCACCTATTTTTTTCTTGTTCGGGCTTTGACTGAATTCGTCT AAGCTGGCCGGCTGTAGAGCTTTTTTAGTTTACCCCTCGTAGGCCTTTTT CGTTTGTTTGTAGACATGCATAGTTTATCTGGTTGAAAGTCGTATGGTTG CCATGAGGGCCATCGTTTGATTCCAGAATGTGGAGCGGGTAAATGTTACG AATCGTAGTAGCTAGTTATGGAAGAACAACAGAAAGATAACGCCCGGGGA CAAACACGCCATTCTACCAGAACCTTACTAAGGACGCGTTTGACAGCGTT GAGACGGGTTTGGTCAGCCCCCATCCGCTCACTCCTCAATCTCCCTGACC ACCACCCTATTTTACAGCTACTACATAACTGTAAACGGGTGCTGCCGACA ATAAAAATAATTACAATATATTGAGCAGCGCCTTAGTAGCCCCTGGACCA AGTGTCTATTAACTGGGCG
back to top

Coding sequence (CDS) from alignment at F-serratus_M_contig105:434420..444838-

>mRNA_F-serratus_M_contig105.515.1 ID=mRNA_F-serratus_M_contig105.515.1|Name=mRNA_F-serratus_M_contig105.515.1|organism=Fucus serratus male|type=CDS|length=2190bp|location=Sequence derived from alignment at F-serratus_M_contig105:434420..444838- (Fucus serratus male)
ATGCAGTCGCTTCTGGTGCTACTTATCTCCGCGATCAACCCACAAATCTC
ATCTTCCTTCGCCACTATCTCTGCAGCTGTATTACCGAGGTCTGCAGCTG
CCAGACTGACCCACGTTTCTCCAGAAGCTGCCCCTGTTATGTCTACAAGT
ACTCGAATAAAAAAGCGACCATCAAGGCCCGGAGTTAGCAGCGAATGCGG
GCCTTCGGCGGAGCCCCAACCTAGACAAAGAAGGCGTTTGGAAGAAAAAG
CAGGGCTAAATCCTTCAGATTTTGGAGCAGATGCTCCGTCGCTCGAGACT
TCGTTGACGGATCCCAACAATCTCATTATCGCATCGCGACGGCTGCACGA
ACGGCTCAAAGATGCAGTCGCTTCTGGTGCTACTTATCTCCGCGATCAAC
CCACAAATCTCATCTTCCTTCGCCACTATCTCTGCAGCTGTATTACCGAG
GTCTGCAGCTGCCAGACTGACCCACGTTTCTCCAGAAGCTGCCCCTGTTA
TGTCTACAAGTACTCGAATAAAAAAGCGACCATCAAGGCCCGGAGTTAGC
AGCGAATGCGGGCCTTCGGCGGAGCCCCAACCTAGACAAAGAAGGCGTTT
GGAAGAAAAAGCAGGGCTAAATCCTTCAGATTTTGGAGCAGATGCTCCGT
CGCTCGAGACTTCGTTGACGGATCCCAACAATCTCATTATCGCATCGCGA
CGGCTGCACGAACGGCTCAAAGGCAAGACCTGGAAGGGCACGAAGAAGCA
GCCCGTGGCGTGCTCGTACGACGTGCTAGAGTACGCCTGGGATCCCTACG
AGGCCTACACTCGGCAGTACGGCGGGGGCAGAGCACTTGGTCGAGCCCTT
GTCGTGGGCATGAATCCCGGTCCGTGGGGGATGGCAAGACCTGGAAGGGC
ACGAAGAAGCAGCCCGTGGCGTGCTCGTACGACGTGCTAGAGTACGCCTG
GGATCCCTACGAGGCCTACACTCGGCAGTACGGCGGGGGCAGAGCACTTG
GTCGAGCCCTTGTCGTGGGCATGAATCCCGGTCCGTGGGGGATGGTGCAA
ACGGGAGTTCCCTTCGGCGAAGTAGATCACGTCCGAGACTGGTTGGGGGT
AAGCGGAGTGGTGGGACGTCCGAGCGAGGAGCATCCCAAGAGGCCGGTGG
AGGGCTTTTCTTGCAAGCGGAGCGAGGTGCAAACGGGAGTTCCCTTCGGC
GAAGTAGATCACGTCCGAGACTGGTTGGGGGTAAGCGGAGTGGTGGGACG
TCCGAGCGAGGAGCATCCCAAGAGGCCGGTGGAGGGCTTTTCTTGCAAGC
GGAGCGAGGTCAGCGGGAAGCGCCTCTGGGGATTCTTCAAGCGAAGATTC
GGGACGGCAGACGCGTGGGGAGGTCAGCGGGAAGCGCCTCTGGGGATTCT
TCAAGCGAAGATTCGGGACGGCAGACGCGTGGGGAGATAAAATGTTCGTG
TACAACTATTGCCCCCTGACGTTCATGAGCTCTTCTGGTGGGAACATTAC
CCCCGACAGATAAAATGTTCGTGTACAACTATTGCCCCCTGACGTTCATG
AGCTCTTCTGGTGGGAACATTACCCCCGACAGGTTGCCGCCAGGCGAGCG
TGAGGTCGTGGAAGCAGCGTGTAACGACGCCTTAGTGAAGATAATAGCGG
CGCTGCGGCCGCGCGTTGTCATCGGCGTCGGAAAATTCACCGGGGCCAAG
TGTCTTGAGGTTGCCGCCAGGCGAGCGTGAGGTCGTGGAAGCAGCGTGTA
ACGACGCCTTAGTGAAGATAATAGCGGCGCTGCGGCCGCGCGTTGTCATC
GGCGTCGGAAAATTCACCGGGGCCAAGTGTCTTGAGGCGATGACTGCCAT
GGGTTCAGGGCCCAGAGGGGGCAACGTCGAGGTGGAGGTTGTCGTGGTGA
ACCACCCGAGCCCGGCAAGCCCCAGTGGGGTTAAGTGGGAGAGAGCAGCC
GGTATGGACGAGCTTGTTCTCGGCTGCAGCAAGTGCAAGGAAATAGATCG
TTTTCTTGGATAGGCGATGACTGCCATGGGTTCAGGGCCCAGAGGGGGCA
ACGTCGAGGTGGAGGTTGTCGTGGTGAACCACCCGAGCCCGGCAAGCCCC
AGTGGGGTTAAGTGGGAGAGAGCAGCCGGTATGGACGAGCTTGTTCTCGG
CTGCAGCAAGTGCAAGGAAATAGATCGTTTTCTTGGATAG
back to top