prot_F-serratus_M_contig1044.451.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1044.451.1
Unique Nameprot_F-serratus_M_contig1044.451.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length224
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1044.451.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00019LEURICHRPTcoord: 177..190
score: 55.54
coord: 132..145
score: 54.71
NoneNo IPR availableSMARTSM00365LRR_sd22_2coord: 105..128
e-value: 210.0
score: 4.7
coord: 208..223
e-value: 370.0
score: 2.8
coord: 57..83
e-value: 230.0
score: 4.5
coord: 177..197
e-value: 110.0
score: 7.1
coord: 129..152
e-value: 100.0
score: 7.3
coord: 153..174
e-value: 300.0
score: 3.6
coord: 9..35
e-value: 180.0
score: 5.3
NoneNo IPR availablePANTHERPTHR27008:SF356coord: 72..172
coord: 119..223
coord: 24..125
NoneNo IPR availablePANTHERPTHR27008FAMILY NOT NAMEDcoord: 72..172
coord: 119..223
coord: 24..125
NoneNo IPR availablePANTHERPTHR27008FAMILY NOT NAMEDcoord: 2..102
NoneNo IPR availablePANTHERPTHR27008:SF356coord: 2..102
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 2..223
IPR003591Leucine-rich repeat, typical subtypeSMARTSM00369LRR_typ_2coord: 153..176
e-value: 8.0
score: 14.1
coord: 33..56
e-value: 120.0
score: 4.4
coord: 129..152
e-value: 7.7
score: 14.2
coord: 177..208
e-value: 12.0
score: 12.7
coord: 57..80
e-value: 17.0
score: 11.4
coord: 81..104
e-value: 8.0
score: 14.0
coord: 9..32
e-value: 17.0
score: 11.4
coord: 105..128
e-value: 16.0
score: 11.5
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 150..224
e-value: 5.6E-23
score: 83.1
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 97..149
e-value: 8.5E-19
score: 69.6
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 1..96
e-value: 1.4E-33
score: 117.9
IPR001611Leucine-rich repeatPFAMPF00560LRR_1coord: 12..33
e-value: 0.48
score: 11.2
IPR001611Leucine-rich repeatPFAMPF13855LRR_8coord: 151..190
e-value: 1.6E-9
score: 37.3
coord: 35..94
e-value: 2.0E-11
score: 43.5
coord: 103..142
e-value: 1.4E-9
score: 37.6
IPR001611Leucine-rich repeatPFAMPF13516LRR_6coord: 211..223
e-value: 0.23
score: 11.6

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1044contigF-serratus_M_contig1044:224179..229852 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1044.451.1mRNA_F-serratus_M_contig1044.451.1Fucus serratus malemRNAF-serratus_M_contig1044 224176..229852 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1044.451.1 ID=prot_F-serratus_M_contig1044.451.1|Name=mRNA_F-serratus_M_contig1044.451.1|organism=Fucus serratus male|type=polypeptide|length=224bp
MIPSELGGLSALKTLYLTNNQLSGMIPSELGGLSTLKTLHLFNNHLSGMI
PSELGGLSALKTLYLTNNQLSGMIPSELGGLSALETLNLSGNQLSGMIPS
ELGGLSALKTLYLTNNQLSGMIPSELDGLSALKTLDLSGNQLSGMIPSEL
DGLSALKTLDLSGNQLSGMIPSELGGLSALETLDLSGNQLSGKYVRGFWM
IPSELGGLSALKTLDLSGNQLSGK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003591Leu-rich_rpt_typical-subtyp
IPR032675LRR_dom_sf
IPR001611Leu-rich_rpt