prot_F-serratus_M_contig1041.430.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1041.430.1
Unique Nameprot_F-serratus_M_contig1041.430.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length172
Homology
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BLAST of mRNA_F-serratus_M_contig1041.430.1 vs. uniprot
Match: D7FHG7_ECTSI (LNR domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHG7_ECTSI)

HSP 1 Score: 94.7 bits (234), Expect = 2.180e-19
Identity = 53/85 (62.35%), Postives = 60/85 (70.59%), Query Frame = 0 
Query:    1 ESLDDEEEQRGVVKKLRWRTEVGWMGPSAIPAGSAPASGS---SSCGGCRGDGFVIPLDIRRRGKVRALAHSLVTDVVEAVLRRC 82
            ESLDDEEEQRGVVKKLRWRTEVG   PS  PA + P +     SS G    DGFV PLD+RR+ K+R LAH+LV D VEA L +C
Sbjct:  219 ESLDDEEEQRGVVKKLRWRTEVGRTIPSTRPAAARPPASVAPVSSTGD--DDGFVSPLDLRRKAKLRGLAHALVLDTVEAALAQC 301
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BLAST of mRNA_F-serratus_M_contig1041.430.1 vs. uniprot
Match: A0A6H5L3J9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3J9_9PHAE)

HSP 1 Score: 93.6 bits (231), Expect = 5.320e-19
Identity = 53/88 (60.23%), Postives = 59/88 (67.05%), Query Frame = 0 
Query:    1 ESLDDEEEQRGVVKKLRWRTEVGWMGPSAI------PAGSAPASGSSSCGGCRGDGFVIPLDIRRRGKVRALAHSLVTDVVEAVLRRC 82
            ESLDDEEEQRGVVKKLRWRTEVG   PS        PA  AP S S +      DGFV PLD+RR+ K+R LAH+LV D VEA L +C
Sbjct:  360 ESLDDEEEQRGVVKKLRWRTEVGRTIPSTRTAAARPPASVAPVSSSGN-----DDGFVSPLDLRRKAKLRGLAHALVLDTVEAALAQC 442
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1041.430.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FHG7_ECTSI2.180e-1962.35LNR domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5L3J9_9PHAE5.320e-1960.23Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1041contigF-serratus_M_contig1041:15857..16925 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1041.430.1mRNA_F-serratus_M_contig1041.430.1Fucus serratus malemRNAF-serratus_M_contig1041 15857..16925 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1041.430.1 ID=prot_F-serratus_M_contig1041.430.1|Name=mRNA_F-serratus_M_contig1041.430.1|organism=Fucus serratus male|type=polypeptide|length=172bp
ESLDDEEEQRGVVKKLRWRTEVGWMGPSAIPAGSAPASGSSSCGGCRGDG
FVIPLDIRRRGKVRALAHSLVTDVVEAVLRRCVLETTTPLPIPTSKAAAG
FKRTADMALSKEAAAAATTLATATADATVAAVAAAPCSVIPAAAFKRAAL
SATAKPGAVELLPTCPWPSPAE
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