prot_F-serratus_M_contig1040.429.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1040.429.1
Unique Nameprot_F-serratus_M_contig1040.429.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length433
Homology
BLAST of mRNA_F-serratus_M_contig1040.429.1 vs. uniprot
Match: D7FP11_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FP11_ECTSI)

HSP 1 Score: 429 bits (1104), Expect = 4.010e-145
Identity = 227/424 (53.54%), Postives = 278/424 (65.57%), Query Frame = 0
Query:   23 ILWTGVWTLLDRHAPGGTGVWKEVALALVGAFVMIWTRTLFSNAGMDSLDYEGTLVEMGSLLEQGRLDWRDKAAFFARSVLAIAGAILFWDGVFTLCDQYVWENTLAYNLCCATVGGAGMVWAMTSEDAEREAMGGGIDGLLRPAGVRVALAGKLEGGELTLTRLSQERRTMLYAKAIFCNVCSVVFWKGVAEVIERVGPDTGWTGVVFFVVGIVVLRLTQRLSLNSGLEDDLGIVVEMGPEMGPT------------------RDYQMTPLRVDDGVED-------SVQKTSKAFGDRHIRDTESTVGGTVRPLGYGCPDAFFWPCALGMVDVLGENCPRWVMTATELTGVVFAWTGIEWYVWDGDYIKDTWLRDVAYIVAGLTILIATGTFANLAGTISPMSILKQVHKYNKYEETQPLLAS 421
            +LWTGVWTLLDRH PGGTG+WKE+ LA+ GA++M+WTRT FSNAGMDSLD EG+L EMGSLL QGRL WRD+A F+ARS+LAI G+ILFWDGV+ LCD++ WE TL YNL CA++GGAGMVW MTSED +    G  I G   PA +  + A +  G     +RL    R  LYAKA+FCNVC VVFWKGV E+IE  GP+  WTG+VFFV+GI +L  T RLS+NSGLED L   V++  + GP                   R    +PL +D  V D        +     +FG  ++R      G   R  G GC            V+V     PRWV TA ELTGVVFAWTGIEWYVW+GDYI D+ LRD+ YI  GL IL+ TGTF NLAGTISP++ LKQVH++N++EE  PLL++
Sbjct:    1 MLWTGVWTLLDRHVPGGTGLWKELGLAVAGAWIMVWTRTFFSNAGMDSLDQEGSLSEMGSLLVQGRLRWRDEAKFYARSLLAIVGSILFWDGVYDLCDEHTWEGTLTYNLVCASLGGAGMVWVMTSEDEDERMRGDDIGG--GPAAMMASAANRSGGRS---SRLGPGNRGRLYAKALFCNVCGVVFWKGVEEIIEDNGPNKDWTGLVFFVIGISILIATDRLSMNSGLEDGLPPAVDI--QAGPAACTIETAAWDASSSNPDLRAPSSSPLLLDVVVNDLSCPGCSRLVAAPTSFGGGNVRSPCGGEGAGSRRRGRGC------------VEV-----PRWVTTAAELTGVVFAWTGIEWYVWEGDYIPDSALRDLGYIAVGLGILVGTGTFFNLAGTISPVAALKQVHQHNRHEEAMPLLSN 400          
BLAST of mRNA_F-serratus_M_contig1040.429.1 vs. uniprot
Match: A0A835Z909_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z909_9STRA)

HSP 1 Score: 80.9 bits (198), Expect = 2.110e-14
Identity = 60/197 (30.46%), Postives = 81/197 (41.12%), Query Frame = 0
Query:  222 PDTGWTGVVFFVVGIVVLRLTQRLSLNSGLEDDLGIVVEMGPEMGPTRDYQMTPLRVDDGVEDSVQKTSKAFGDRHIRDTESTVGGTVRPLGYGCPDAFFWPCALGMVDVLGENCPRWVMTATELTGVVFAWTGIEWYVWDGDYIKDTWLRDVAYIVAGLTILIATGTFANLAGTISPMSILKQVHKYNKYEETQPL 418
            PD  W     FV GI+VLR   RL  N GL D        GP+ G  R +  +         D VQ               S +G T+                               + A+EL  V   WTG EW++WDG    +T  RD  Y + G  +L+ TGTF +LAGT+SPM +  +VH+  +  E +PL
Sbjct:    2 PDKWWAPATLFVGGIIVLRALDRLDTNLGLVDG-------GPKGG--RKHTQS---------DKVQ---------------SAMGQTL-------------------------------LNASELIAVCLIWTGCEWFIWDGFLFHETCTRDSLYALVGFAVLLCTGTFVSLAGTVSPMGVYGRVHQKLQNNE-EPL 133          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1040.429.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FP11_ECTSI4.010e-14553.54Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835Z909_9STRA2.110e-1430.46Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 97..116
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 147..194
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..31
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 195..213
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..11
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 396..432
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 128..146
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 214..224
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 243..373
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 32..45
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 64..96
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 117..127
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 46..63
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 225..242
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 374..395
NoneNo IPR availableTMHMMTMhelixcoord: 376..398
NoneNo IPR availableTMHMMTMhelixcoord: 46..63
NoneNo IPR availableTMHMMTMhelixcoord: 128..147
NoneNo IPR availableTMHMMTMhelixcoord: 96..118
NoneNo IPR availableTMHMMTMhelixcoord: 339..361
NoneNo IPR availableTMHMMTMhelixcoord: 12..31
NoneNo IPR availableTMHMMTMhelixcoord: 195..214
NoneNo IPR availableTMHMMTMhelixcoord: 224..241

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1040contigF-serratus_M_contig1040:204354..229082 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1040.429.1mRNA_F-serratus_M_contig1040.429.1Fucus serratus malemRNAF-serratus_M_contig1040 204274..230011 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1040.429.1 ID=prot_F-serratus_M_contig1040.429.1|Name=mRNA_F-serratus_M_contig1040.429.1|organism=Fucus serratus male|type=polypeptide|length=433bp
MRTERGTWMDVLRGGLSWPGIVILWTGVWTLLDRHAPGGTGVWKEVALAL
VGAFVMIWTRTLFSNAGMDSLDYEGTLVEMGSLLEQGRLDWRDKAAFFAR
SVLAIAGAILFWDGVFTLCDQYVWENTLAYNLCCATVGGAGMVWAMTSED
AEREAMGGGIDGLLRPAGVRVALAGKLEGGELTLTRLSQERRTMLYAKAI
FCNVCSVVFWKGVAEVIERVGPDTGWTGVVFFVVGIVVLRLTQRLSLNSG
LEDDLGIVVEMGPEMGPTRDYQMTPLRVDDGVEDSVQKTSKAFGDRHIRD
TESTVGGTVRPLGYGCPDAFFWPCALGMVDVLGENCPRWVMTATELTGVV
FAWTGIEWYVWDGDYIKDTWLRDVAYIVAGLTILIATGTFANLAGTISPM
SILKQVHKYNKYEETQPLLASEGAGARSDSPR*
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