prot_F-serratus_M_contig1030.348.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1030.348.1
Unique Nameprot_F-serratus_M_contig1030.348.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length199
Homology
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BLAST of mRNA_F-serratus_M_contig1030.348.1 vs. uniprot
Match: D8LUC9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LUC9_ECTSI)

HSP 1 Score: 201 bits (511), Expect = 7.820e-63
Identity = 97/156 (62.18%), Postives = 116/156 (74.36%), Query Frame = 0 
Query:   43 PTVQEGLFVKNNWIFKRDFFFKRDQPRNGQDVVDMRANRLAKFGKSGEVGYWKVERRAPPGAKRNLKLALQNGFDVLVLDVPEQGDRKDLIVSYEIPVTRGRYHPSAIMFADEGKIFVARAKEELTGTAAAARKNIGTFKVDLATLPPIVDRTFTL 198
            P VQ+G F K +W   RDFFFKRDQ +NG D +  R N+LA+F  SGEVGYWK+ RR  PGA +        G D LVLD+PEQG R++LIVSYEIP++ GRYHPS+IMFA +G I+VA AKE+L G AAAARK IG+F VDL TL P+VDRTFTL
Sbjct:   15 PLVQDGSFAKADWRITRDFFFKRDQAKNGADFLTARENKLARFNNSGEVGYWKLVRRPIPGAPKRQSPLGNEGIDYLVLDIPEQGPRRNLIVSYEIPISNGRYHPSSIMFAQKGTIYVANAKEQLVGPAAAARKKIGSFSVDLPTLEPMVDRTFTL 170
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1030.348.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LUC9_ECTSI7.820e-6362.18Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..36
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 29..36
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 18..28
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 37..198
NoneNo IPR availableSIGNALP_EUKSignalP-TMSignalP-TMcoord: 1..36
score: 0.612
NoneNo IPR availableTMHMMTMhelixcoord: 13..35

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1030contigF-serratus_M_contig1030:4183..6435 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1030.348.1mRNA_F-serratus_M_contig1030.348.1Fucus serratus malemRNAF-serratus_M_contig1030 4065..6906 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1030.348.1 ID=prot_F-serratus_M_contig1030.348.1|Name=mRNA_F-serratus_M_contig1030.348.1|organism=Fucus serratus male|type=polypeptide|length=199bp
MAHPAGRLLSSCAVASRLTLTLFLAMLAMLADLTLARGIVPGPTVQEGLF
VKNNWIFKRDFFFKRDQPRNGQDVVDMRANRLAKFGKSGEVGYWKVERRA
PPGAKRNLKLALQNGFDVLVLDVPEQGDRKDLIVSYEIPVTRGRYHPSAI
MFADEGKIFVARAKEELTGTAAAARKNIGTFKVDLATLPPIVDRTFTL*
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