prot_F-serratus_M_contig1026.322.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1026.322.1
Unique Nameprot_F-serratus_M_contig1026.322.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length210
Homology
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BLAST of mRNA_F-serratus_M_contig1026.322.1 vs. uniprot
Match: A0A6H5K6G7_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6G7_9PHAE)

HSP 1 Score: 76.6 bits (187), Expect = 1.220e-12
Identity = 55/109 (50.46%), Postives = 68/109 (62.39%), Query Frame = 0 
Query:   41 RRSLQLGREDNDANQ---HHGRYIHATDFDGHFVYREEPTAHCCKTVRGAITTWLNVEDDLAVLEAEIDMEIQAVENNFANLEVDSASSEDEDGDGRSESCIAPSLTEA 146
            RR L+LGRE  DA Q   H  + I     D  F+  E+ +      VR AI TWL+VEDD +VLE E+ +E++ VE N ANLEVD ASS+DEDG  R  SCI  S+TEA
Sbjct:    5 RRPLRLGREAVDARQRRRHRRQKIPGVLTDNLFI--EKNSGLTDVEVRKAIKTWLSVEDDPSVLEDEVALELEIVEQNMANLEVD-ASSDDEDGGDRPASCITSSMTEA 110
[Close]
BLAST of mRNA_F-serratus_M_contig1026.322.1 vs. uniprot
Match: A0A6H5K176_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K176_9PHAE)

HSP 1 Score: 62.0 bits (149), Expect = 3.210e-9
Identity = 35/61 (57.38%), Postives = 44/61 (72.13%), Query Frame = 0 
Query:   84 VRGAITTWLNVEDDLAVLEAEIDMEIQAVENNFANLEVDSASSEDEDGDGRSESCIAPSLT 144
            VR AI TWL+V+DD +VLE E+ +E++ VE N ANLEVD ASS+DED   R  SC   S+T
Sbjct:   34 VRKAIMTWLSVKDDPSVLEDEVALELEIVEQNMANLEVD-ASSDDEDSGDRPASCTTSSMT 93
[Close]
BLAST of mRNA_F-serratus_M_contig1026.322.1 vs. uniprot
Match: A0A6H5KGD7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGD7_9PHAE)

HSP 1 Score: 57.0 bits (136), Expect = 3.300e-6
Identity = 30/57 (52.63%), Postives = 41/57 (71.93%), Query Frame = 0 
Query:   84 VRGAITTWLNVEDDLAVLEAEIDMEIQAVENNFANLEV-DSASSEDEDGDGRSESCI 139
            VR A++TWL+VEDD  VL  EI++E++ V  N + + V D  SSE+ED DGR ESC+
Sbjct:  122 VRSAVSTWLSVEDDEEVLREEIELEMEEVTENMSRVHVEDDVSSEEEDPDGRQESCM 178
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1026.322.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 13
Match NameE-valueIdentityDescription
A0A6H5K6G7_9PHAE1.220e-1250.46Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5K176_9PHAE3.210e-957.38Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KGD7_9PHAE3.300e-652.63Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 109..129

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1026contigF-serratus_M_contig1026:192913..193542 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1026.322.1mRNA_F-serratus_M_contig1026.322.1Fucus serratus malemRNAF-serratus_M_contig1026 186115..193542 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1026.322.1 ID=prot_F-serratus_M_contig1026.322.1|Name=mRNA_F-serratus_M_contig1026.322.1|organism=Fucus serratus male|type=polypeptide|length=210bp
MLAQGRHLFQQSRERPQEEGYATRSRRQGGHGHHRQHGHHRRSLQLGRED
NDANQHHGRYIHATDFDGHFVYREEPTAHCCKTVRGAITTWLNVEDDLAV
LEAEIDMEIQAVENNFANLEVDSASSEDEDGDGRSESCIAPSLTEADVRS
RLKEVCYYLYPNGKNGEYRKTLYLPSRSVHSFIHKSRAKRKAREGRETQA
TLRDLWRNS*
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