prot_F-serratus_M_contig102.273.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig102.273.1
Unique Nameprot_F-serratus_M_contig102.273.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length113
Homology
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BLAST of mRNA_F-serratus_M_contig102.273.1 vs. uniprot
Match: A0A6H5JU63_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU63_9PHAE)

HSP 1 Score: 102 bits (255), Expect = 2.190e-26
Identity = 59/110 (53.64%), Postives = 70/110 (63.64%), Query Frame = 0 
Query:    1 MFPSVGGQILGSCRFYGATLLATSRSTPKEAMNRALLNYRWPFSACWARGHKTVSSVKKRVRLTGSGNLKRGQTGRRHNTGPKPRSRMRQLMQTRLIEGTQKKKILWMLG 110
            MF  + G+    CR +G  ++            R +L           RGHKTVSSVKKRVR+TGSGNLKRGQ+G RH TGPKPRSR+R L QT+LI G QKKK+LWMLG
Sbjct:    1 MFSLLVGRAFEPCRLHGGNVM------------RVVLGA--------VRGHKTVSSVKKRVRITGSGNLKRGQSGMRHITGPKPRSRLRNLGQTKLILGKQKKKVLWMLG 90
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BLAST of mRNA_F-serratus_M_contig102.273.1 vs. uniprot
Match: D7FQT0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQT0_ECTSI)

HSP 1 Score: 91.3 bits (225), Expect = 4.950e-22
Identity = 46/57 (80.70%), Postives = 51/57 (89.47%), Query Frame = 0 
Query:   54 VSSVKKRVRLTGSGNLKRGQTGRRHNTGPKPRSRMRQLMQTRLIEGTQKKKILWMLG 110
            VSSVKKRVR+TGSGNLKRGQ+G RH TGPKPRSR+R L QT+LI G QKKK+LWMLG
Sbjct:   17 VSSVKKRVRITGSGNLKRGQSGMRHITGPKPRSRLRSLGQTKLILGKQKKKVLWMLG 73
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BLAST of mRNA_F-serratus_M_contig102.273.1 vs. uniprot
Match: A0A4V1QUL6_9FIRM (50S ribosomal protein L35 n=2 Tax=Firmicutes TaxID=1239 RepID=A0A4V1QUL6_9FIRM)

HSP 1 Score: 51.2 bits (121), Expect = 2.200e-6
Identity = 26/54 (48.15%), Postives = 33/54 (61.11%), Query Frame = 0 
Query:   52 KTVSSVKKRVRLTGSGNLKRGQTGRRHNTGPKPRSRMRQLMQTRLIEGTQKKKI 105
            KT S  KKR  +TGSG +KR Q+G+ H TG KPR R R L QT  +  T +  +
Sbjct:    5 KTHSGSKKRFDVTGSGKVKRAQSGKNHKTGDKPRKRKRNLRQTAFVNETMESNV 58
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BLAST of mRNA_F-serratus_M_contig102.273.1 vs. uniprot
Match: A0A367XXF2_9MICO (50S ribosomal protein L35 n=2 Tax=Microbacterium TaxID=33882 RepID=A0A367XXF2_9MICO)

HSP 1 Score: 48.9 bits (115), Expect = 1.660e-5
Identity = 26/59 (44.07%), Postives = 36/59 (61.02%), Query Frame = 0 
Query:   52 KTVSSVKKRVRLTGSGNLKRGQTGRRHNTGPKPRSRMRQLMQTRLIEGTQKKKILWMLG 110
            KT S  KKR ++TGSG +K+ Q+G RHN   K   R R+L Q +L+ G   K +  +LG
Sbjct:    5 KTHSGAKKRFKITGSGKIKKQQSGMRHNLEVKSSRRTRRLNQDQLVSGNDMKTVKKLLG 63
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig102.273.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5JU63_9PHAE2.190e-2653.64Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FQT0_ECTSI4.950e-2280.70Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A4V1QUL6_9FIRM2.200e-648.1550S ribosomal protein L35 n=2 Tax=Firmicutes TaxID... [more]
A0A367XXF2_9MICO1.660e-544.0750S ribosomal protein L35 n=2 Tax=Microbacterium T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021137Ribosomal protein L35PFAMPF01632Ribosomal_L35pcoord: 52..109
e-value: 1.4E-13
score: 51.2
IPR021137Ribosomal protein L35PANTHERPTHR33343FAMILY NOT NAMEDcoord: 52..109
NoneNo IPR availableGENE3D2.40.50.530coord: 52..110
e-value: 5.4E-12
score: 48.1
NoneNo IPR availablePANTHERPTHR33343:SF150S RIBOSOMAL PROTEIN L35coord: 52..109
IPR018265Ribosomal protein L35, conserved sitePROSITEPS00936RIBOSOMAL_L35coord: 52..78
IPR037229Ribosomal protein L35 superfamilySUPERFAMILY143034L35p-likecoord: 52..110

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig102contigF-serratus_M_contig102:806035..809181 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig102.273.1mRNA_F-serratus_M_contig102.273.1Fucus serratus malemRNAF-serratus_M_contig102 805936..809830 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig102.273.1 ID=prot_F-serratus_M_contig102.273.1|Name=mRNA_F-serratus_M_contig102.273.1|organism=Fucus serratus male|type=polypeptide|length=113bp
MFPSVGGQILGSCRFYGATLLATSRSTPKEAMNRALLNYRWPFSACWARG
HKTVSSVKKRVRLTGSGNLKRGQTGRRHNTGPKPRSRMRQLMQTRLIEGT
QKKKILWMLGCG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR021137Ribosomal_L35
IPR018265Ribosomal_L35_CS
IPR037229Ribosomal_L35_sf