prot_F-serratus_M_contig102.264.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_F-serratus_M_contig102.264.1
Unique Name	prot_F-serratus_M_contig102.264.1
Type	polypeptide
Organism	Fucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length	287

Homology

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BLAST of mRNA_F-serratus_M_contig102.264.1 vs. uniprot
Match: D8LU31_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU31_ECTSI)

HSP 1 Score: 153 bits (386), Expect = 3.680e-39
Identity = 83/126 (65.87%), Postives = 99/126 (78.57%), Query Frame = 0

Query:  117 SALASAASLLSIALAHFGLKKVFVRAGLKFPPSLAGMVLLFAGLVALERGAPGAAENTVKLLEPGSDLLSRWLPVFFAPSLVVLPLSPAPSITNDIKLLLVIFGGWFVSLASTATVVSSSHPLSPP 242
            S LA+  S  +I +A F L++ FVRAG+ FPPSLAGMV+LFAGLV LER AP +AE+ V  LEPG+ LL+RWLPVFFAPSLVVLPLSP PS  N +KLLL++ GGWFVSL+STA VV +   LSPP
Sbjct:   96 SLLATGTSFTAIVVADFVLRRAFVRAGIAFPPSLAGMVVLFAGLVVLERAAPKSAEDIVSSLEPGAALLARWLPVFFAPSLVVLPLSPPPSSVNALKLLLLVCGGWFVSLSSTAAVVGA---LSPP 218

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BLAST of mRNA_F-serratus_M_contig102.264.1 vs. uniprot
Match: UPI001C4C752D (plastidal glycolate/glycerate translocator 1, chloroplastic-like n=3 Tax=Zingiber officinale TaxID=94328 RepID=UPI001C4C752D)

HSP 1 Score: 85.1 bits (209), Expect = 6.260e-15
Identity = 52/119 (43.70%), Postives = 70/119 (58.82%), Query Frame = 0

Query:  113 PKRLSALASAASLLSIALAHFGLKKVFVRAGLKFPPSLAGMVLLFAGLVALERGAPGAAENTVKLLEPGSDLLSRWLPVFFAPSLVVLPLS----PAPSITNDIKLLLVIFGGWFVSLA 227
            P  L  L  A SL  I  A   LKK FV A +KFP +L GM  +F+ L AL+  AP AA+  +   EP +  + RWLP+F+ PSLVVLPL+    PA S    +K+ +++ GGW  SL+
Sbjct:  102 PGALRILHLALSLGIILTADKLLKKAFVAASIKFPSALFGMFCVFSVLTALDYAAPSAAKGVMDFFEPATTFIQRWLPLFYVPSLVVLPLAVRDVPAAS---GLKIFVILVGGWLASLS 217

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BLAST of mRNA_F-serratus_M_contig102.264.1 vs. uniprot
Match: A0A8J5FK89_ZINOF (MADS-box domain-containing protein n=3 Tax=Zingiber officinale TaxID=94328 RepID=A0A8J5FK89_ZINOF)

HSP 1 Score: 85.1 bits (209), Expect = 7.990e-15
Identity = 52/119 (43.70%), Postives = 70/119 (58.82%), Query Frame = 0

Query:  113 PKRLSALASAASLLSIALAHFGLKKVFVRAGLKFPPSLAGMVLLFAGLVALERGAPGAAENTVKLLEPGSDLLSRWLPVFFAPSLVVLPLS----PAPSITNDIKLLLVIFGGWFVSLA 227
            P  L  L  A SL  I  A   LKK FV A +KFP +L GM  +F+ L AL+  AP AA+  +   EP +  + RWLP+F+ PSLVVLPL+    PA S    +K+ +++ GGW  SL+
Sbjct:  102 PGALRILHLALSLGIILTADKLLKKAFVAASIKFPSALFGMFCVFSVLTALDYAAPSAAKGVMDFFEPATTFIQRWLPLFYVPSLVVLPLAVRDVPAAS---GLKIFVILVGGWLASLS 217

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BLAST of mRNA_F-serratus_M_contig102.264.1 vs. uniprot
Match: A0A835ED85_9POAL (Uncharacterized protein n=2 Tax=Digitaria exilis TaxID=1010633 RepID=A0A835ED85_9POAL)

HSP 1 Score: 84.0 bits (206), Expect = 1.590e-14
Identity = 45/97 (46.39%), Postives = 61/97 (62.89%), Query Frame = 0

Query:  135 LKKVFVRAGLKFPPSLAGMVLLFAGLVALERGAPGAAENTVKLLEPGSDLLSRWLPVFFAPSLVVLPLS----PAPSITNDIKLLLVIFGGWFVSLA 227
            LK+ FV A +KFP +L GM  +F+GLV L+   P  A+  +   EP +  + RWLP+F+ PSLVVLPL+    PA S    +K+  + FGGWF SLA
Sbjct:  143 LKQAFVAASIKFPSALFGMFCVFSGLVILDTFVPALAKGFMDFFEPATMFIQRWLPLFYVPSLVVLPLAVRDVPAAS---GLKIFAITFGGWFASLA 236

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BLAST of mRNA_F-serratus_M_contig102.264.1 vs. uniprot
Match: A0A151SHZ8_CAJCA (Inner membrane protein yohK n=1 Tax=Cajanus cajan TaxID=3821 RepID=A0A151SHZ8_CAJCA)

HSP 1 Score: 83.2 bits (204), Expect = 2.430e-14
Identity = 47/98 (47.96%), Postives = 60/98 (61.22%), Query Frame = 0

Query:  133 FGLKKVFVRAGLKFPPSLAGMVLLFAGLVALERGAPGAAENTVKLLEPGSDLLSRWLPVFFAPSLVVLPLS----PAPSITNDIKLLLVIFGGWFVSL 226
            F LKK FV A ++FP +L GM  +F+ L+ L+   P AA   VK  EPG   + RWLP+F+ P LVVLPLS    P PS    IK+ L+I GGW  +L
Sbjct:   55 FLLKKAFVAASIEFPSALFGMFCIFSVLIILDCAVPSAAVAMVKFFEPGFMFIQRWLPLFYVPYLVVLPLSIKDIPTPS---AIKICLIIVGGWLATL 149

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BLAST of mRNA_F-serratus_M_contig102.264.1 vs. uniprot
Match: A0A7S3SVU0_EMIHU (Hypothetical protein (Fragment) n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3SVU0_EMIHU)

HSP 1 Score: 80.5 bits (197), Expect = 2.720e-14
Identity = 55/132 (41.67%), Postives = 72/132 (54.55%), Query Frame = 0

Query:  113 PKRLSALASAASLLSIALAHFGLKKVFVRAGLKFPPSLAGMVLLFAGLVALERGAPGAAENTVKLLEPGSDLLSRWLPVFFAPSLVVLPLSPAPSITNDIKLLLVIFGGWFVSL------ASTATVVSSSHP 238
            P   S L   ASL  I LA   LK+ FVR G+ FP SLAG V+LFA L +L   +P  A    +   PG  ++++WLP+FF P+LV+LPL       +  +L L+I GG  +SL      A TA   S S P
Sbjct:   41 PAEPSLLRRGASLGGIVLADALLKRGFVRRGVAFPSSLAGSVMLFASLCSLRAISPPLARGVARAARPGCAIIAKWLPLFFVPNLVLLPLVLRLGAGDAARLALLIGGGAVLSLPACGFAARTALAASESLP 172

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BLAST of mRNA_F-serratus_M_contig102.264.1 vs. uniprot
Match: A0A452YR80_AEGTS (Uncharacterized protein n=1 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A452YR80_AEGTS)

HSP 1 Score: 82.0 bits (201), Expect = 4.020e-14
Identity = 45/97 (46.39%), Postives = 62/97 (63.92%), Query Frame = 0

Query:  135 LKKVFVRAGLKFPPSLAGMVLLFAGLVALERGAPGAAENTVKLLEPGSDLLSRWLPVFFAPSLVVLPLS----PAPSITNDIKLLLVIFGGWFVSLA 227
            LK+ FV A +KFP +L GM  +F+ L+ L+  AP  A+  +   EP +  + RWLP+F+ PSLVVLPL+    PA S    +K+ L+ FGGWF SLA
Sbjct:  163 LKQAFVAASIKFPSALFGMFCIFSVLLVLDTVAPALAKAFMDFFEPATLFIQRWLPLFYVPSLVVLPLAVRDVPAAS---GLKICLITFGGWFASLA 256

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BLAST of mRNA_F-serratus_M_contig102.264.1 vs. uniprot
Match: V4SYJ4_CITCL (Uncharacterized protein (Fragment) n=1 Tax=Citrus clementina TaxID=85681 RepID=V4SYJ4_CITCL)

HSP 1 Score: 82.0 bits (201), Expect = 4.430e-14
Identity = 45/96 (46.88%), Postives = 60/96 (62.50%), Query Frame = 0

Query:  135 LKKVFVRAGLKFPPSLAGMVLLFAGLVALERGAPGAAENTVKLLEPGSDLLSRWLPVFFAPSLVVLPLS----PAPSITNDIKLLLVIFGGWFVSL 226
            LKK FV A +KFP +L GM  +F+ L+ L+   P AA + +   EP    + RWLP+F+ PSLV+LPLS    PA S    +K+  +IFGGWF SL
Sbjct:  124 LKKAFVAAAIKFPSALFGMFCIFSILMILDSTIPDAATSLMSFFEPALLFIQRWLPLFYVPSLVILPLSVRDIPAAS---GLKICYIIFGGWFASL 216

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BLAST of mRNA_F-serratus_M_contig102.264.1 vs. uniprot
Match: A0A452YR87_AEGTS (Uncharacterized protein n=3 Tax=Pooideae TaxID=147368 RepID=A0A452YR87_AEGTS)

HSP 1 Score: 82.0 bits (201), Expect = 5.720e-14
Identity = 45/97 (46.39%), Postives = 62/97 (63.92%), Query Frame = 0

Query:  135 LKKVFVRAGLKFPPSLAGMVLLFAGLVALERGAPGAAENTVKLLEPGSDLLSRWLPVFFAPSLVVLPLS----PAPSITNDIKLLLVIFGGWFVSLA 227
            LK+ FV A +KFP +L GM  +F+ L+ L+  AP  A+  +   EP +  + RWLP+F+ PSLVVLPL+    PA S    +K+ L+ FGGWF SLA
Sbjct:   41 LKQAFVAASIKFPSALFGMFCIFSVLLVLDTVAPALAKAFMDFFEPATLFIQRWLPLFYVPSLVVLPLAVRDVPAAS---GLKICLITFGGWFASLA 134

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BLAST of mRNA_F-serratus_M_contig102.264.1 vs. uniprot
Match: M8AG30_TRIUA (Uncharacterized protein ywbG n=2 Tax=Triticum TaxID=4564 RepID=M8AG30_TRIUA)

HSP 1 Score: 82.0 bits (201), Expect = 6.210e-14
Identity = 45/97 (46.39%), Postives = 62/97 (63.92%), Query Frame = 0

Query:  135 LKKVFVRAGLKFPPSLAGMVLLFAGLVALERGAPGAAENTVKLLEPGSDLLSRWLPVFFAPSLVVLPLS----PAPSITNDIKLLLVIFGGWFVSLA 227
            LK+ FV A +KFP +L GM  +F+ L+ L+  AP  A+  +   EP +  + RWLP+F+ PSLVVLPL+    PA S    +K+ L+ FGGWF SLA
Sbjct:   68 LKQAFVAASIKFPSALFGMFCIFSVLLVLDTVAPALAKAFMDFFEPATLFIQRWLPLFYVPSLVVLPLAVRDVPAAS---GLKICLITFGGWFASLA 161

The following BLAST results are available for this feature:

BLAST of mRNA_F-serratus_M_contig102.264.1 vs. uniprot

BLAST of mRNA_F-serratus_M_contig102.264.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D8LU31_ECTSI	3.680e-39	65.87	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
UPI001C4C752D	6.260e-15	43.70	plastidal glycolate/glycerate translocator 1, chlo...	[more]
A0A8J5FK89_ZINOF	7.990e-15	43.70	MADS-box domain-containing protein n=3 Tax=Zingibe...	[more]
A0A835ED85_9POAL	1.590e-14	46.39	Uncharacterized protein n=2 Tax=Digitaria exilis T...	[more]
A0A151SHZ8_CAJCA	2.430e-14	47.96	Inner membrane protein yohK n=1 Tax=Cajanus cajan ...	[more]
A0A7S3SVU0_EMIHU	2.720e-14	41.67	Hypothetical protein (Fragment) n=1 Tax=Emiliania ...	[more]
A0A452YR80_AEGTS	4.020e-14	46.39	Uncharacterized protein n=1 Tax=Aegilops tauschii ...	[more]
V4SYJ4_CITCL	4.430e-14	46.88	Uncharacterized protein (Fragment) n=1 Tax=Citrus ...	[more]
A0A452YR87_AEGTS	5.720e-14	46.39	Uncharacterized protein n=3 Tax=Pooideae TaxID=147...	[more]
M8AG30_TRIUA	6.210e-14	46.39	Uncharacterized protein ywbG n=2 Tax=Triticum TaxI...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005538	LrgA/CidA family	PFAM	PF03788	LrgA	coord: 143..233 e-value: 9.9E-8 score: 31.8
IPR007300	CidB/LrgB family	PANTHER	PTHR30249	PUTATIVE SEROTONIN TRANSPORTER	coord: 122..259
None	No IPR available	PANTHER	PTHR30249:SF0	PLASTIDAL GLYCOLATE/GLYCERATE TRANSLOCATOR 1, CHLOROPLASTIC	coord: 122..259
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 203..213
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 135..145
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..6
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..19
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 116..134
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 214..233
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 184..202
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 234..286
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 7..14
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 20..115
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 165..183
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 146..164
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 15..19
None	No IPR available	SIGNALP_EUK	SignalP-noTM	SignalP-noTM	coord: 1..19 score: 0.64

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
F-serratus_M_contig102	contig	F-serratus_M_contig102:160915..170621 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Fucus serratus MALE	2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90	2022-09-16
OGS1.0 of Fucus serratus male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_F-serratus_M_contig102.264.1	mRNA_F-serratus_M_contig102.264.1	Fucus serratus male	mRNA	F-serratus_M_contig102 160842..173775 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_F-serratus_M_contig102.264.1 ID=prot_F-serratus_M_contig102.264.1|Name=mRNA_F-serratus_M_contig102.264.1|organism=Fucus serratus male|type=polypeptide|length=287bp
MWTSVRLSALTACCPQVLGFVLEGYCGMSLSRVHTSTPRVHMMRSSYPGS
MSASPPVLESIRQAHNVTPSRGRRSGRTTVLLAEAEDTADPKTLQLPLLA
NEPPSPPVPSRTPKRLSALASAASLLSIALAHFGLKKVFVRAGLKFPPSL
AGMVLLFAGLVALERGAPGAAENTVKLLEPGSDLLSRWLPVFFAPSLVVL
PLSPAPSITNDIKLLLVIFGGWFVSLASTATVVSSSHPLSPPHRPRSPPS
PPPLHKNPKQSLRRHSARLSSRDWVSVRSFQERWQQ*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR005538	LrgA/CidA
IPR007300	CidB/LrgB