prot_F-serratus_M_contig1008.174.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1008.174.1
Unique Nameprot_F-serratus_M_contig1008.174.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length1119
Homology
BLAST of mRNA_F-serratus_M_contig1008.174.1 vs. uniprot
Match: D7FKD5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKD5_ECTSI)

HSP 1 Score: 586 bits (1511), Expect = 1.660e-190
Identity = 395/946 (41.75%), Postives = 532/946 (56.24%), Query Frame = 0
Query:    8 QGTRVDCLFDDDYFRGTVDATTIDGEKRDLFRVRFDDGDVRDDVPEEDMELPLEPGIRVQCLFEDDEAYFDGVIGRDNGDATYLVTFDDGDVLVAAPRRDIQIVSPPTNHKVNSAKGDADQAKDVHGYTGNLEDACCEREDHMKEGPDGNAVNSVDSTAEDVNSRQYWAHERGDMEYSKPKTGPVD-SHLKQTVPDRQHQDAGNAQNAERETSCAPDCSGGRSSESNNGTTTGVAERTSGDDSGGGARHFCSGRQKRFNQ--ERSPAFIPATHNPVHAYIEALAAATPRLMEDAPPDFRLWAVSYQMVALEDQLREQASAKGETWNDSILFVEGVMGGSNTLSSGRKFHPRRYDNEPGGYAGGR--TRGTTLKEGAVASSFPANLELRKMVENLSTLRIRQASRHERTMALVRLCYGDSSLDMVQALCDLAEGYAKEGLWPQVSNHMTRVADILAGLHGPEKFDDGGAFGTREGGWRNLDSTCGDTNLYNLQAEE--AFYPS---LRPVCWPEPYRYTNPALCSSLRSAGCARLILQVLKLIRTAANITFFGPRYALKVVRVNLEALLLAHPDETLRSAGPGIFGN-DLPTACGWGVVVDVLRERSRLFVDLNLKARSVFEGVMPKHAGAFRIAFRRVDPEGLGIANAQVVALMALAEDPHTNVENLQTRGNPGRHSLLGNRIRLLTGRSQAHTNSLPGAYSNLSTALCELKRWAHHEEIGRFWGVTPSDHHGPPLLDKVPSSTSAFQQKSKIKAKKLAKDWAQGDEGQDVFKEECRRLLQECRGRTEVIFREEVELKTWQTLVANRAQTIARELEGQGRDLEFAEKHLLRAWEILESRYGRYHTDGGAACVSLGNLAITRNRQDEAENWFRRALETFERCFAGERPPVSASIEATLGKLLVGQGQQMERDGERSPDKEASRRRLLLEATRLIEKAAAFYSERVET 942
            +GTRVDCLF D+YFRG VD T   G     +RV FDDGD+R+D P ED+ELPLE G RV+C+FE ++ YFDGVI  DNGDATY V FDDGDVL AAPR DI+++S   +H+  SA   A  A+D +      E    +     +   +  +  + ++  +D NS+   A   G++        PV+ +H     P R  +  G+     R        S   SS  + G+++G  +R     +G   R   S R +   +  + S  ++P + NP+HA++EALAAA PRL+ +APPDFRL A+S+++  LE+QLR+Q  A+GE W+  +   E  +  ++    GR     R D E    +GG    R TT + GA A SFPA+ ELR++ E+LSTLR++Q       +ALVRLCYGD+SL+MVQA+ DLA+GYAKE LWPQVSNHM R ADILA   G     +G       GG   +D          L+ +E    YP     R + +P   RY++PALC SL  A  ARL+L++LK +R   ++   G R   +V R N EA L  H D+ LRSA   +     +P+ CGWG  +  LR  S LF DLNLK   + EGV  K A   R+AF+ VDP+G G A ++++ALM   ++  T VE           SLL  R++ LTGR + HTN L  A  NLS AL EL+R      +G   G  P  +    L D +  +    Q+ S IKAKKLA+ W QG EGQD++K+EC+RL+ ECR R EV+ R E+E +TWQ LVA R++ + REL G+G++L+ AE +L+R WEILESR+GR   D GAACVSLG+LA+ R R +EA +WFRRAL TFE                                              L EAT L+EKAA FYSERV T
Sbjct:   11 KGTRVDCLFGDEYFRGKVDDTDGSGSS---YRVIFDDGDIREDAPPEDLELPLEQGCRVECMFEGEDGYFDGVISIDNGDATYKVDFDDGDVLDAAPRHDIRVLS--WSHE-ESAPSKAVTAEDNNTNVAEQEGTGFDTRYSDRSHNEAESEGNREAQKDDENSKVISAA-HGELP-------PVEETHDSPRQPQRFSEVDGSEDGYGRAGDEPAGTSQHGSSPRHLGSSSGEPQRIHDSWTGRELRGTLSNRNEPTTELVQASSLYVPTSPNPLHAHLEALAAAAPRLLAEAPPDFRLSAISHRIAVLEEQLRQQ-EARGEAWHLPVFSAETPLHPADPSLRGRLERQGRSDPEQATGSGGEGSPRATTARGGAAAPSFPAHAELRQVAEDLSTLRMKQ-------IALVRLCYGDASLEMVQAIADLADGYAKEDLWPQVSNHMARAADILARDKGSRVPGNGFFITATPGGGTYVDPRLRFKGHSGLRGDEPRGGYPEGQRARGLAFPTENRYSDPALCRSLTQARSARLLLELLKGLRL--SVVEGGERG--QVERENFEAFLSTHKDKALRSARHRLLLEAQMPSNCGWGAALGCLRRNSPLFADLNLK---IMEGVQQKQAAKVRLAFQAVDPDGTGCAESEILALMVADDEEETAVEGRVGVAWQRLRSLLHVRVQTLTGRCETHTNRLAAASRNLSEALAELERLG----LGEASGSVPVLNA---LTDALALTHRRHQEMSSIKAKKLAETWIQGKEGQDLWKQECKRLVLECRRRLEVVPRAEIEERTWQALVAYRSKILTRELGGKGKELDTAEDYLVRVWEILESRHGRNDPDVGAACVSLGSLAVIRRRLNEAIDWFRRALGTFE---------------------------------------------ALEEATGLMEKAATFYSERVTT 875          
BLAST of mRNA_F-serratus_M_contig1008.174.1 vs. uniprot
Match: A0A6H5JCV6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCV6_9PHAE)

HSP 1 Score: 254 bits (648), Expect = 8.680e-68
Identity = 199/536 (37.13%), Postives = 268/536 (50.00%), Query Frame = 0
Query:    8 QGTRVDCLFDDDYFRGTVDATTIDGEKRDLFRVRFDDGDVRDDVPEEDMELPLEPGIRVQCLFEDDEAYFDGVIGRDNGDATYLVTFDDGDVLVAAPRRDIQIVSPPTNHKV-NSAKGDADQAKDVHGYTGNLEDACCEREDHMKEGPDGN--AVNSVDST---------------AEDVNSRQYWAHERGDMEYSKPKTGPVDSHLKQTVPDR------------------QHQDAGNAQNAERETSCAPD-CSGGRSSESNNGTTTGVAERTSGDDSGGGARHF--CSGRQ---KRFNQERSPA--------FIPATHNPVHAYIEALAAATPRLMEDAPPDFRLWAVSYQMVALEDQLREQAS-----------AKGETWNDSILFVEGVMGGSNTLSSGR-----KFHPRRYDNEPGGYAG-GRTRGTTLKEGAVASSFPANLELRKMVENLSTLRIRQASRHERT---------------------------MALVRLCYGDSSLDMVQALCDLAEGYAKEGLWPQVSNHM 449
            +GTRVDCLF D+YFRG VD T   G     +RV FDDGD+R+D P ED+E+PLE G RV+C+FE ++ YFDGVI  DNGDATY V FDDGDVL AAPR DI+++S P    V  +A    D   +V    G   D       H +   +GN  A  + D++                 D   R     E G  E    +TG   +   Q                        + D G AQ   R+     D CS  R  E+ + T +G  E   G  SG   R+   C+GR       N++   A        ++P + NP+HA++EALAAA P L+ +APPDFRL A S+++ ALE+QLR+Q             A+GE W+  +   +  +  ++    GR     +  P +   E  G  G G +R T  + GA A SFPA+ ELR++VE+LSTLR++QA   +                             +ALVRLCYGD+SL+MVQA+ DLA+GYAKE LWPQ SN +
Sbjct:   11 KGTRVDCLFGDEYFRGKVDDTDGGGSS---YRVIFDDGDIREDAPPEDLEIPLEQGCRVECMFEGEDGYFDGVISTDNGDATYKVDFDDGDVLDAAPRHDIRVLSWPHEESVPTNAVTAEDNYTNVTEQEGKALDTGYSNRSHNEAESEGNREAQKNDDNSKGISAAHGELPPREETHDPPHRPQRFSEVGGSEDGYGRTGDEPAGTSQHXXXXXXXXXXXXXXXXXXXXSVNYGDNGIAQET-RDCDFGHDICS--RVKETRSSTRSG--EEDPGSSSGEPQRNHDSCTGRNLWGTPSNRDEPTAELVQAPSLYVPTSPNPLHAHLEALAAAAPHLLAEAPPDFRLSATSHRIAALEEQLRQQVGGVLWPCGKGGEARGEAWHLPVFSAKTPLHPADPSLCGRPERQGRSIPEQVSAEATGSGGEGSSRATKARGGAAAPSFPAHTELRQVVEDLSTLRMKQARSAQLAPVKLMAARETVAAAIMMSRSVFSYIAQIALVRLCYGDASLEMVQAIADLADGYAKEDLWPQASNSV 538          
BLAST of mRNA_F-serratus_M_contig1008.174.1 vs. uniprot
Match: A0A6H5J7A2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7A2_9PHAE)

HSP 1 Score: 113 bits (283), Expect = 7.890e-26
Identity = 53/86 (61.63%), Postives = 69/86 (80.23%), Query Frame = 0
Query:  790 EVELKTWQTLVANRAQTIARELEGQGRDLEFAEKHLLRAWEILESRYGRYHTDGGAACVSLGNLAITRNRQDEAENWFRRALETFE 875
            ++E +TWQ LVA R++ + REL G+G++L+ AE +L+RAWEILESR GR   D GAAC+SLGNLA+ R R +EA +WFRRALETFE
Sbjct:   20 QIEERTWQALVAYRSKVLTRELGGKGKELDTAEDYLVRAWEILESRQGRNDPDVGAACISLGNLAVIRRRLNEAIDWFRRALETFE 105          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1008.174.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FKD5_ECTSI1.660e-19041.75Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JCV6_9PHAE8.680e-6837.13Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5J7A2_9PHAE7.890e-2661.63Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 1056..1089
e-value: 9.6
score: 15.1
coord: 844..877
e-value: 7.9
score: 15.4
NoneNo IPR availableGENE3D2.30.30.140coord: 59..113
e-value: 4.0E-8
score: 34.9
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 771..949
e-value: 2.9E-10
score: 41.7
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 821..1088

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1008contigF-serratus_M_contig1008:77640..96531 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1008.174.1mRNA_F-serratus_M_contig1008.174.1Fucus serratus malemRNAF-serratus_M_contig1008 77528..96559 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1008.174.1 ID=prot_F-serratus_M_contig1008.174.1|Name=mRNA_F-serratus_M_contig1008.174.1|organism=Fucus serratus male|type=polypeptide|length=1119bp
MSRNPFVQGTRVDCLFDDDYFRGTVDATTIDGEKRDLFRVRFDDGDVRDD
VPEEDMELPLEPGIRVQCLFEDDEAYFDGVIGRDNGDATYLVTFDDGDVL
VAAPRRDIQIVSPPTNHKVNSAKGDADQAKDVHGYTGNLEDACCEREDHM
KEGPDGNAVNSVDSTAEDVNSRQYWAHERGDMEYSKPKTGPVDSHLKQTV
PDRQHQDAGNAQNAERETSCAPDCSGGRSSESNNGTTTGVAERTSGDDSG
GGARHFCSGRQKRFNQERSPAFIPATHNPVHAYIEALAAATPRLMEDAPP
DFRLWAVSYQMVALEDQLREQASAKGETWNDSILFVEGVMGGSNTLSSGR
KFHPRRYDNEPGGYAGGRTRGTTLKEGAVASSFPANLELRKMVENLSTLR
IRQASRHERTMALVRLCYGDSSLDMVQALCDLAEGYAKEGLWPQVSNHMT
RVADILAGLHGPEKFDDGGAFGTREGGWRNLDSTCGDTNLYNLQAEEAFY
PSLRPVCWPEPYRYTNPALCSSLRSAGCARLILQVLKLIRTAANITFFGP
RYALKVVRVNLEALLLAHPDETLRSAGPGIFGNDLPTACGWGVVVDVLRE
RSRLFVDLNLKARSVFEGVMPKHAGAFRIAFRRVDPEGLGIANAQVVALM
ALAEDPHTNVENLQTRGNPGRHSLLGNRIRLLTGRSQAHTNSLPGAYSNL
STALCELKRWAHHEEIGRFWGVTPSDHHGPPLLDKVPSSTSAFQQKSKIK
AKKLAKDWAQGDEGQDVFKEECRRLLQECRGRTEVIFREEVELKTWQTLV
ANRAQTIARELEGQGRDLEFAEKHLLRAWEILESRYGRYHTDGGAACVSL
GNLAITRNRQDEAENWFRRALETFERCFAGERPPVSASIEATLGKLLVGQ
GQQMERDGERSPDKEASRRRLLLEATRLIEKAAAFYSERVETNLRIHGFS
DTDAEASAAAGGHIFFARSDLDIVGSWLDPQTACFARRAAELWIQVADLR
ESVSGGAVRGADGGDDDGEGGGGNRSKVDAGVRAEMFVQAARATEISRGA
CSVALAKVLQKLGEVRQGNGDYAGAREAFSRAHAIYTDRYGRQDPRAKST
ATAVSAATAAVACRTDTP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019734TPR_repeat
IPR011990TPR-like_helical_dom_sf