prot_F-serratus_M_contig1005.157.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1005.157.1
Unique Nameprot_F-serratus_M_contig1005.157.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length269
Homology
BLAST of mRNA_F-serratus_M_contig1005.157.1 vs. uniprot
Match: A0A6G0XPY7_9STRA (Diphosphomevalonate decarboxylase n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XPY7_9STRA)

HSP 1 Score: 186 bits (471), Expect = 6.900e-53
Identity = 112/238 (47.06%), Postives = 143/238 (60.08%), Query Frame = 0
Query:   16 GFGSRDMEVADEHHWPEMRAFILVASPGKKDTSSTAGMSTSVQTSPLLGLKARKVAPPRLAEIEKAYLERDFASFGKSTMQDSNHFHATCLDTFPPIFYMNDMSYISRSVIPIIHAYNAFHDEIRAAYTFDAGPNAVVYHLAKDSAELLALLLRFYPAPGDGSVEDNASRSGEYVNNGDIMKEAEEADAALSEGLQEACLKTGRTPAAGDVKMIYYTKTGGSPRVLDDKGRMLDLESG 253
            G  S  +++AD  HWPE+ A I V +  +KDTSST GM TS  TS LLG +AR+V   RLA IE AY   DF +FGK TM DSN FHATCLDT+PPIFYMN+   ISRS+I ++H YN    +I+AAYTFDAGPNAV++    ++ E++ALL  FY         D+AS   E     D        D +L      A +KT  TP A  +KM+Y+T  G   RVL     ++DL +G
Sbjct:  178 GSDSLAIQIADHEHWPELEAIICVVNDKEKDTSSTDGMMTSKNTSELLGFRAREVVDKRLAAIEAAYKAMDFETFGKITMMDSNQFHATCLDTYPPIFYMNE---ISRSIIHLVHKYNDNAGKIQAAYTFDAGPNAVIFVEKHNTKEVVALLKHFY---------DSASTPLEIRGPVDATS-LPSVDPSLL-----ASIKTQVTPGA--LKMLYHTTVGDGRRVLPASEALIDLSTG 395          
BLAST of mRNA_F-serratus_M_contig1005.157.1 vs. uniprot
Match: A0A7K6PCI9_9CORV (MVD1 decarboxylase (Fragment) n=3 Tax=Neognathae TaxID=8825 RepID=A0A7K6PCI9_9CORV)

HSP 1 Score: 181 bits (458), Expect = 1.780e-52
Identity = 103/233 (44.21%), Postives = 137/233 (58.80%), Query Frame = 0
Query:   16 GFGSRDMEVADEHHWPEMRAFILVASPGKKDTSSTAGMSTSVQTSPLLGLKARKVAPPRLAEIEKAYLERDFASFGKSTMQDSNHFHATCLDTFPPIFYMNDMSYISRSVIPIIHAYNAFHDEIRAAYTFDAGPNAVVYHLAKDSAELLALLLRFYPAPGDGSVEDNASRSGEYVNNGDIMKEAEEADAALSEGLQEACLKTGRTPAAGDVKMIYYTKTGGSPRVLDDKGRML 248
            G  S  ++VA E HWPE+R  +LV S  KK   STAGM TSV+TSPLL  +A  V P RLA++ +   ERDF  FG+  M+DSN FHATCLDTFPPIFY+ D+S   R +I + H YNA H   + AYTFDAGPNAV++ LA   AE + ++ R +P   +G          ++V    +        AALS+ L  A +     P  G V+ I +TK G  P+++DD  + L
Sbjct:   44 GTDSLALQVAPETHWPELRVLVLVVSGEKKPVGSTAGMQTSVETSPLLKHRAEVVVPERLAQMMRHIRERDFEGFGQLAMRDSNQFHATCLDTFPPIFYLTDLS---RHIIALAHRYNAHHGHTKVAYTFDAGPNAVIFALADTVAEFVEVVRRSFPPATNGD---------QFVRGLPV------GSAALSQELVAAVVTE---PMPGAVQYILHTKPGPGPQLVDDPSQHL 255          
BLAST of mRNA_F-serratus_M_contig1005.157.1 vs. uniprot
Match: B8BS75_THAPS (Diphosphomevalonate decarboxylase (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BS75_THAPS)

HSP 1 Score: 183 bits (464), Expect = 2.030e-52
Identity = 95/151 (62.91%), Postives = 112/151 (74.17%), Query Frame = 0
Query:   23 EVADEHHWPEMRAFILVASPGKKDTSSTAGMSTSVQTSPLLGLKARKVAPPRLAEIEKAYLERDFASFGKSTMQDSNHFHATCLDTFPPIFYMNDMSYISRSVIPIIHAYNAFHDEIRAAYTFDAGPNAVVYHLAKDSAELLALLLRFYPA 173
            +VADE HW EMRA ILV S  KK+TSST GM TSV TS LL  +A+++ P R+  IE A   +DF +FGK TM DSN FHATCLDT+PPIFYMND   +SRSVI ++  YN +  EIRAAYTFDAGPNAV+Y L K   ELLAL+L+ YPA
Sbjct:  189 QVADEMHWKEMRAVILVVSDAKKETSSTVGMETSVATSELLAHRAKEIVPKRMKIIEDAIQAKDFEAFGKVTMMDSNQFHATCLDTYPPIFYMND---VSRSVIQMVTRYNEWAGEIRAAYTFDAGPNAVLYTLDKYVVELLALVLKHYPA 336          
BLAST of mRNA_F-serratus_M_contig1005.157.1 vs. uniprot
Match: F2UMF1_SALR5 (Diphosphomevalonate decarboxylase n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2UMF1_SALR5)

HSP 1 Score: 184 bits (467), Expect = 2.770e-52
Identity = 103/240 (42.92%), Postives = 144/240 (60.00%), Query Frame = 0
Query:   16 GFGSRDMEVADEHHWPEMRAFILVASPGKKDTSSTAGMSTSVQTSPLLGLKARKVAPPRLAEIEKAYLERDFASFGKSTMQDSNHFHATCLDTFPPIFYMNDMSYISRSVIPIIHAYNAFHDEIRAAYTFDAGPNAVVYHLAKDSAELLALLLRFYPAPGDGSVEDNASRSGEYVNNGDIMKEAEEADAALSEGLQEACLKTGRTPAAGDVKMIYYTKTGGSPRVLDDKGRMLDLESGDV 255
            G  S   +V  E HWP+M+  ILV + GKK  SST+GM ++V+TS L+  +A  V P R+ +IEKA  +RDF +FG+ TMQDSN FHATCLDT+PPIFYMND   +SR ++ I+  YN    EIRAAYT+DAGPN V+Y L +   E+L+L+  ++P+     V   ++ + +Y +           DAA+ E +      +G T A G VK I +T  G  P+ L ++   L  E G V
Sbjct:  176 GADSLASQVVPESHWPDMQVLILVVNAGKKGVSSTSGMQSTVKTSALINHRAEVVVPQRMKDIEKAIQDRDFQTFGRITMQDSNQFHATCLDTYPPIFYMND---VSRQIVQILTQYNDAAGEIRAAYTYDAGPNCVIYCLKQHVQEILSLVCHYFPSSESEFVRGRSTTASDYSST---------VDAAVREKI------SGPTTADG-VKYILHTGIGPGPKTLTNEDAFLIAEDGSV 396          
BLAST of mRNA_F-serratus_M_contig1005.157.1 vs. uniprot
Match: A0A5A8DJ08_CAFRO (Diphosphomevalonate decarboxylase n=3 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8DJ08_CAFRO)

HSP 1 Score: 185 bits (469), Expect = 4.460e-52
Identity = 103/231 (44.59%), Postives = 138/231 (59.74%), Query Frame = 0
Query:   23 EVADEHHWPEMRAFILVASPGKKDTSSTAGMSTSVQTSPLLGLKARKVAPPRLAEIEKAYLERDFASFGKSTMQDSNHFHATCLDTFPPIFYMNDMSYISRSVIPIIHAYNAFHDEIRAAYTFDAGPNAVVYHLAKDSAELLALLLRFYPAPGDGSVEDNASRSGEYVNNGDIMKEAEEADAALSEGLQEACLKTGRTPAAGDVKMIYYTKTGGSPRVLDDKGRMLDLESG 253
            +VA   HWP++   + V S  KK+T STAGM+TSV+TS LL  +A  V  PRL+ IE AY  RDF +FG  TM+DSN FHA CLDTFPPIFYMND   +S+ +I ++H +NA H  I AAYTFDAGPNAV+Y     +A LLA ++  +P P   ++  +A    EYV++   +      +AA + G+             G V+ IY T  G  PR LDD   ++D  +G
Sbjct:  213 QVATADHWPDLEVIVCVVSADKKETGSTAGMTTSVETSELLAHRAAAVVEPRLSAIEAAYTARDFPTFGAITMRDSNQFHACCLDTFPPIFYMND---VSKRLIALVHRFNAKHGSIVAAYTFDAGPNAVIYTTKAHTAALLATVMAHFPRPA--ALASDA----EYVSSAPAL------EAAKAAGVPAGLECPSGDEDVGAVRYIYKTTPGDGPRRLDDSASLVDSATG 428          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1005.157.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6G0XPY7_9STRA6.900e-5347.06Diphosphomevalonate decarboxylase n=1 Tax=Aphanomy... [more]
A0A7K6PCI9_9CORV1.780e-5244.21MVD1 decarboxylase (Fragment) n=3 Tax=Neognathae T... [more]
B8BS75_THAPS2.030e-5262.91Diphosphomevalonate decarboxylase (Fragment) n=1 T... [more]
F2UMF1_SALR52.770e-5242.92Diphosphomevalonate decarboxylase n=1 Tax=Salpingo... [more]
A0A5A8DJ08_CAFRO4.460e-5244.59Diphosphomevalonate decarboxylase n=3 Tax=Cafeteri... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036554GHMP kinase, C-terminal domain superfamilyGENE3D3.30.70.890coord: 26..241
e-value: 5.2E-63
score: 214.3
IPR036554GHMP kinase, C-terminal domain superfamilySUPERFAMILY55060GHMP Kinase, C-terminal domaincoord: 32..241
IPR041431Mvd1, C-terminalPFAMPF18376MDD_Ccoord: 36..241
e-value: 2.8E-60
score: 203.3
NoneNo IPR availablePANTHERPTHR10977DIPHOSPHOMEVALONATE DECARBOXYLASEcoord: 22..251

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1005contigF-serratus_M_contig1005:114945..118399 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1005.157.1mRNA_F-serratus_M_contig1005.157.1Fucus serratus malemRNAF-serratus_M_contig1005 114916..118841 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1005.157.1 ID=prot_F-serratus_M_contig1005.157.1|Name=mRNA_F-serratus_M_contig1005.157.1|organism=Fucus serratus male|type=polypeptide|length=269bp
MANIEFPTPRVVISPGFGSRDMEVADEHHWPEMRAFILVASPGKKDTSST
AGMSTSVQTSPLLGLKARKVAPPRLAEIEKAYLERDFASFGKSTMQDSNH
FHATCLDTFPPIFYMNDMSYISRSVIPIIHAYNAFHDEIRAAYTFDAGPN
AVVYHLAKDSAELLALLLRFYPAPGDGSVEDNASRSGEYVNNGDIMKEAE
EADAALSEGLQEACLKTGRTPAAGDVKMIYYTKTGGSPRVLDDKGRMLDL
ESGDVIDPTPSCSNGTSS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036554GHMP_kinase_C_sf
IPR041431Mvd1_C