mRNA_F-serratus_M_contig1005.157.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig1005.157.1
Unique NamemRNA_F-serratus_M_contig1005.157.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
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BLAST of mRNA_F-serratus_M_contig1005.157.1 vs. uniprot
Match: D7FTH9_ECTSI (Diphosphomevalonate decarboxylase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTH9_ECTSI)

HSP 1 Score: 354 bits (909), Expect = 7.360e-116
Identity = 179/244 (73.36%), Postives = 202/244 (82.79%), Query Frame = 3 
Query:   93 MEVADEHHWPEMRAFILVASPGKKDTSSTAGMSTSVQTSPLLGLKARKVAPPRLAEIEKAYLERDFASFGKSTMQDSNHFHATCLDTFPPIFYMNDMSYISRSVIPIIHAYNAFHDEIRAAYTFDAGPNAVVYHLAKDSAELLALLLRFYPAPGDGSVEDNA-SRSGEYVNNGDIMKEAEEADAALSEGLQEACLKTGRTPAAGDVKMIYYTKTGGSPRVLDDKGRMLDLESGDVIDPTPSCSN 821
            ++VADEHHWPEMRA ILV S  KKDTSST+GMSTSVQTSPLLG +A++V  PRLAEIEKAYLE+DFA+FGK TMQDSN FHATCLDT+PPIFYMND   +SRSVI I+HAYNAFH EIRAAYTFDAGPNAVVYHLA DSAELLALLLRFYPAP   S  + + S SG YVN+   ++ A EADA L EGL EACLKTGRTP  G+VKM+YYTK GG PRVL D+ RMLDLE+GD + P+ S S+
Sbjct:  193 VQVADEHHWPEMRALILVVSADKKDTSSTSGMSTSVQTSPLLGFRAKEVVEPRLAEIEKAYLEKDFATFGKITMQDSNQFHATCLDTYPPIFYMND---VSRSVIRIVHAYNAFHGEIRAAYTFDAGPNAVVYHLAGDSAELLALLLRFYPAPAGSSTSNGSTSTSGAYVNSAAALEAAREADACLPEGLYEACLKTGRTPTVGEVKMVYYTKAGGPPRVLGDEERMLDLETGDPVFPSASGSS 433
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BLAST of mRNA_F-serratus_M_contig1005.157.1 vs. uniprot
Match: A0A7S1DAT8_CYCTE (Diphosphomevalonate decarboxylase n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1DAT8_CYCTE)

HSP 1 Score: 246 bits (627), Expect = 7.040e-75
Identity = 133/231 (57.58%), Postives = 159/231 (68.83%), Query Frame = 3 
Query:   96 EVADEHHWPEMRAFILVASPGKKDTSSTAGMSTSVQTSPLLGLKARKVAPPRLAEIEKAYLERDFASFGKSTMQDSNHFHATCLDTFPPIFYMNDMSYISRSVIPIIHAYNAFHDEIRAAYTFDAGPNAVVYHLAKDSAELLALLLRFYPAPGDGSVEDNASRSGEYVNNGDIMKEAEEADAALSEGLQEACLKTGRTPAAGDVKMIYYTKTGGSPRVLDDKGRMLDLESG 788
            ++A E HWPE+RA ILV S  KKDTSSTAGMSTSV TS LL  +A  + P R+ +IEKAYLE+DF +FG+ TM DSN FHATCLDT+PPIFYMND   ISRSVI I+HAYNA+  EIRAAYTFDAGPNAV+Y L + + EL AL+L +YP+ GD            YVNN   + +       L   L EA  +TGRTP AGDVKMIYYTK+G  P+ L  K   +D  +G
Sbjct:  108 QIASEQHWPELRAIILVVSDQKKDTSSTAGMSTSVATSELLQHRATHIVPKRMEQIEKAYLEKDFETFGRVTMADSNQFHATCLDTYPPIFYMND---ISRSVIRIVHAYNAWAGEIRAAYTFDAGPNAVLYTLERYAIELSALMLHYYPSFGDN-----------YVNNPKFLVKIRSTQ--LDPQLLEATDRTGRTPQAGDVKMIYYTKSGPGPQTLSTKEANIDPTTG 322
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BLAST of mRNA_F-serratus_M_contig1005.157.1 vs. uniprot
Match: A0A7S4J2Z5_9STRA (Diphosphomevalonate decarboxylase n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4J2Z5_9STRA)

HSP 1 Score: 241 bits (616), Expect = 4.570e-72
Identity = 131/231 (56.71%), Postives = 158/231 (68.40%), Query Frame = 3 
Query:   96 EVADEHHWPEMRAFILVASPGKKDTSSTAGMSTSVQTSPLLGLKARKVAPPRLAEIEKAYLERDFASFGKSTMQDSNHFHATCLDTFPPIFYMNDMSYISRSVIPIIHAYNAFHDEIRAAYTFDAGPNAVVYHLAKDSAELLALLLRFYPAPGDGSVEDNASRSGEYVNNGDIMKEAEEADAALSEGLQEACLKTGRTPAAGDVKMIYYTKTGGSPRVLDDKGRMLDLESG 788
            +VA E HWPE+RA I+V S  KKDTSSTAGMSTSV+TS LL  +A++V P R+A IEKA+LE+DF SFG  TM DSN FHATCLDTFPPIFYMND   ISRS+I I+HAYN +  EIRAAYTFDAGPNAV+Y L K + E+ AL+L FYPA  D            Y+NN     + EE    L + L  A  KTGR    GDVK IYYT++G  P+ LD    ++D ++G
Sbjct:  199 QVASESHWPEIRAVIMVVSDAKKDTSSTAGMSTSVKTSKLLAHRAKEVVPERMAAIEKAWLEKDFESFGNITMADSNQFHATCLDTFPPIFYMND---ISRSIIQIVHAYNFWAGEIRAAYTFDAGPNAVIYTLDKHAPEVAALMLHFYPACQDAQS---------YINNPSFAGKVEEYQ--LDKTLITAVEKTGRDATPGDVKKIYYTRSGPGPQRLDKSHAIIDPDTG 415
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BLAST of mRNA_F-serratus_M_contig1005.157.1 vs. uniprot
Match: A0A3G5BBY8_HASOS (Diphosphomevalonate decarboxylase n=1 Tax=Haslea ostrearia TaxID=67476 RepID=A0A3G5BBY8_HASOS)

HSP 1 Score: 234 bits (596), Expect = 3.440e-69
Identity = 126/235 (53.62%), Postives = 163/235 (69.36%), Query Frame = 3 
Query:   84 SRDMEVADEHHWPEMRAFILVASPGKKDTSSTAGMSTSVQTSPLLGLKARKVAPPRLAEIEKAYLERDFASFGKSTMQDSNHFHATCLDTFPPIFYMNDMSYISRSVIPIIHAYNAFHDEIRAAYTFDAGPNAVVYHLAKDSAELLALLLRFYPAPGDGSVEDNASRSGEYVNNGDIMKEAEEADAALSEGLQEACLKTGRTPAAGDVKMIYYTKTGGSPRVLDDKGRMLDLESG 788
            S   +VADE+HWPE+RA I+V S  KKDTSST+GMSTSV TS LL  +A  V   R+  IEKA+L +DF SFG+ TM DSN FHATCLDT+PPIFYMND   +S+S+I I+HAYNA+  E+R+AYT+DAGPNAV++ L K   E+ AL+L +YP  G+            Y++N +   + +E    L EGL EA  KTGRTP AG VKM+YYTK+G  P++L D+   LD ++G
Sbjct:  190 SMAQQVADENHWPEIRAVIMVVSDEKKDTSSTSGMSTSVATSELLKHRAANVVSKRMEAIEKAFLAKDFESFGQLTMADSNQFHATCLDTYPPIFYMND---VSKSIIRILHAYNAWAGELRSAYTYDAGPNAVIFTLDKYVVEVGALMLHYYPEFGEN-----------YISNPEFGTKIKEFK--LDEGLLEATKKTGRTPVAGQVKMMYYTKSGPGPQLLTDQILNLDPKTG 408
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BLAST of mRNA_F-serratus_M_contig1005.157.1 vs. uniprot
Match: A0A7S1ZIN1_9STRA (Diphosphomevalonate decarboxylase n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1ZIN1_9STRA)

HSP 1 Score: 232 bits (592), Expect = 1.820e-68
Identity = 128/232 (55.17%), Postives = 160/232 (68.97%), Query Frame = 3 
Query:   96 EVADEHHWPEMRAFILVASPGKKDTSSTAGMSTSVQTSPLLGLKARKVAPPRLAEIEKAYLERDFASFGKSTMQDSNHFHATCLDTFPPIFYMNDMSYISRSVIPIIHAYNAFHDEIRAAYTFDAGPNAVVYHLAKDSAELLALLLRFYPAP-GDGSVEDNASRSGEYVNNGDIMKEAEEADAALSEGLQEACLKTGRTPAAGDVKMIYYTKTGGSPRVLDDKGRMLDLESG 788
            +VA E HWPE+RA ILV S  KKDTSST+GMSTSV TS LL  +A++V P R+ EIEKA+L +DF+SF K TM DSN FHATCLDT+PPIFYMND   +S+SVI I+HAYNA+  E RAAYTFDAGPNAV+Y L   + E+ AL+L FYP   G G V    +         D +++ +E    L   L EA  +TGR P AGDVKM+YYTK+G  P+VL  +  ++D  +G
Sbjct:  201 QVAPETHWPEIRALILVVSDAKKDTSSTSGMSTSVATSLLLAHRAKEVVPKRMEEIEKAWLAKDFSSFAKITMADSNQFHATCLDTYPPIFYMND---VSKSVIRIVHAYNAWAGEERAAYTFDAGPNAVLYTLDNYAVEVGALMLHFYPGDAGSGYVSAGGT---------DFVEKVKEF--TLDASLLEAASRTGREPNAGDVKMMYYTKSGTGPQVLAKEEAIIDAVTG 418
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BLAST of mRNA_F-serratus_M_contig1005.157.1 vs. uniprot
Match: A0A7S4AXK4_9STRA (Diphosphomevalonate decarboxylase n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4AXK4_9STRA)

HSP 1 Score: 231 bits (590), Expect = 2.820e-68
Identity = 123/240 (51.25%), Postives = 163/240 (67.92%), Query Frame = 3 
Query:   72 PGFGSRDMEVADEHHWPEMRAFILVASPGKKDTSSTAGMSTSVQTSPLLGLKARKVAPPRLAEIEKAYLERDFASFGKSTMQDSNHFHATCLDTFPPIFYMNDMSYISRSVIPIIHAYNAFHDEIRAAYTFDAGPNAVVYHLAKDSAELLALLLRFYPAPGDGSVEDNASRSGEYVNNGDIMKEAEEADAALSEGLQEACLKTGRTPAAGDVKMIYYTKTGGSPRVLD-DKGRMLDLESG 788
            P   S  +++ADE+HWPE+RA I+V S  KKDTSSTAGMSTSV TS LL  +  KV P R+  IEKA+L +DF +FG+ TM+DSN FH+ C DT+PPIFYMND   +SR ++ I+HAYN +  E RAAYT+DAGPNAV+Y L K S E+ AL+ +++P+ G     ++AS +                D AL   L EA  K GRTPA+GDVKM+Y+TK+G +P+VLD +K   LD ++G
Sbjct:  184 PWSDSMAVQIADENHWPELRAVIMVVSDAKKDTSSTAGMSTSVATSTLLPHRIAKVVPERMVSIEKAFLAKDFEAFGELTMRDSNQFHSVCADTYPPIFYMND---VSRQIVRIVHAYNKWAGETRAAYTYDAGPNAVLYTLEKHSVEVGALMAQYFPSGGVDGFYNDASYASSVQ------------DFALDPSLVEAADKCGRTPASGDVKMVYHTKSGPAPQVLDNEKDGNLDPKTG 408
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BLAST of mRNA_F-serratus_M_contig1005.157.1 vs. uniprot
Match: A0A812XSB0_SYMMI (Mvd protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812XSB0_SYMMI)

HSP 1 Score: 227 bits (579), Expect = 3.210e-68
Identity = 118/238 (49.58%), Postives = 157/238 (65.97%), Query Frame = 3 
Query:   75 GFGSRDMEVADEHHWPEMRAFILVASPGKKDTSSTAGMSTSVQTSPLLGLKARKVAPPRLAEIEKAYLERDFASFGKSTMQDSNHFHATCLDTFPPIFYMNDMSYISRSVIPIIHAYNAFHDEIRAAYTFDAGPNAVVYHLAKDSAELLALLLRFYPAPGDGSVEDNASRSGEYVNNGDIMKEAEEADAALSEGLQEACLKTGRTPAAGDVKMIYYTKTGGSPRVLDDKGRMLDLESG 788
            G  S   ++ADE+HWPE+RA ILV S  +KDTSSTAGM TS+QTSPLL  +A +V   RL +IE AYL  DF +FG+ TMQDSN FHATCLDT+PPIFYMND   +SR +I I+H  N F+  I+ AYTFDAGPNAVVY L ++S   ++++ +++PA GD S         +Y N+G   + A  + ++L   L      TGR P +GDVK ++ T+ G  P+ LD    MLD ++G
Sbjct:    7 GTDSIAQQIADENHWPELRAVILVVSDREKDTSSTAGMQTSIQTSPLLRFRADEVVESRLRDIENAYLHHDFETFGRITMQDSNQFHATCLDTYPPIFYMND---VSRMIIRIVHVINDFYGCIKLAYTFDAGPNAVVYCLEEESRMFMSVVSKYFPAAGDYS---------DYCNDGRAFESAVSSQSSLPIELLRRLDMTGRVPQSGDVKYVFLTRAGPGPQCLDSSQAMLDTDTG 232
[Close]
BLAST of mRNA_F-serratus_M_contig1005.157.1 vs. uniprot
Match: A0A835YQZ6_9STRA (Diphosphomevalonate decarboxylase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQZ6_9STRA)

HSP 1 Score: 229 bits (584), Expect = 9.570e-67
Identity = 132/268 (49.25%), Postives = 161/268 (60.07%), Query Frame = 3 
Query:   93 MEVADEHHWPEMRAFILVASPGKKDTSSTAGMSTSVQTSPLLGLKARKVAPPRLAEIEKAYLERDFASFGKSTMQDSNHFHATCLDTFPPIFYMNDMSYISRSVIPIIHAYNAFHDEIRAAYTFDAGPNAVVYHLAKDSAELLALLLRFYPAPGDGSVEDNASRSGEYVNNGDIMKEAEEADAALSEGLQEACLKTGRTPAAGDVKMIYYTKTGGSPRVLDDKGRMLDLESG--DVIDPTPSCSNGTSS*ETR*STRYRG*HAGAGCP 890
            ++VADE HWPE+RA I VAS  KK TSST+GM TSV TS LL  +A  +  PRLA IE AYL RDFA FG++TM DSN FHATCLDT+PPIFYMND   +SR+++  +HA+NA H  IRAAYTFDAGPNAVVY  A D A+LLA++ R +P P       +A+ +            AE A   + E L  A L   R P AGDV+M+Y T+ G  PRVL    RMLD  +G      P P   +  +S            H G  CP
Sbjct:  192 VQVADEAHWPELRALIFVASAAKKGTSSTSGMGTSVATSELLRHRAAALVEPRLAAIEAAYLARDFAGFGRATMVDSNQFHATCLDTYPPIFYMND---VSRALVQAVHAFNAHHGAIRAAYTFDAGPNAVVYTTASDVAQLLAVMSRAFPVPRGAPACSDAALA------------AEAAAEDVPEALLAAVLGAVREPRAGDVQMVYATRVGDGPRVLGAADRMLDPATGLNTYAAPPPPLPSAAASASP---------HGGCLCP 435
[Close]
BLAST of mRNA_F-serratus_M_contig1005.157.1 vs. uniprot
Match: A0A1E7FHY1_9STRA (Diphosphomevalonate decarboxylase n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FHY1_9STRA)

HSP 1 Score: 227 bits (579), Expect = 1.580e-66
Identity = 122/241 (50.62%), Postives = 163/241 (67.63%), Query Frame = 3 
Query:   69 SPGFGSRDMEVADEHHWPEMRAFILVASPGKKDTSSTAGMSTSVQTSPLLGLKARKVAPPRLAEIEKAYLERDFASFGKSTMQDSNHFHATCLDTFPPIFYMNDMSYISRSVIPIIHAYNAFHDEIRAAYTFDAGPNAVVYHLAKDSAELLALLLRFYPAPGDGSVEDNASRSGEYVNNGDIMKEAEEADAALSEGLQEACLKTGRTPAAGDVKMIYYTKTGGSPRVL-DDKGRMLDLESG 788
            +P   S  +++ADE+HWPE+RA I+V S  KKDTSSTAGMSTSV TS LL  +  KV P R+A IEKA+LE+DF SFG+ TM+DSN FH+ C DT+PPIFYMND   +SR+++ I+HAYN +  E R AYT+DAGPNAV+Y L K   E+ AL+  ++P+P   +    A+ +  Y N+     +       L+  L  A  KTGR P AGDVK IY+TK+G  P+VL ++K   LDL++G
Sbjct:  185 TPWADSMAVQIADENHWPELRAVIMVVSDEKKDTSSTAGMSTSVATSTLLQHRIAKVVPERMASIEKAFLEKDFESFGELTMKDSNQFHSVCADTYPPIFYMND---VSRTIVRIVHAYNKWAGETRVAYTYDAGPNAVLYTLEKYVVEVGALMAHYFPSPATATT---AAAADGYFNDSTFANDV--TAFTLNSELLAATNKTGRVPNAGDVKKIYHTKSGPGPQVLSNEKDGNLDLKTG 417
[Close]
BLAST of mRNA_F-serratus_M_contig1005.157.1 vs. uniprot
Match: A0A7R9ULP1_DIALT (Diphosphomevalonate decarboxylase n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A7R9ULP1_DIALT)

HSP 1 Score: 225 bits (574), Expect = 2.350e-65
Identity = 127/233 (54.51%), Postives = 149/233 (63.95%), Query Frame = 3 
Query:   99 VADEHHWPEMRAFILVASPGKKDTSSTAGMSTSVQTSPLLGLKARKVAPPRLAEIEKAYLERDFASFGKSTMQDSNHFHATCLDTFPPIFYMNDMSYISRSVIPIIHAYNAFHDEIRAAYTFDAGPNAVVYHLAKDSAELLALLLRFYPAPGDGSVEDNASRSGEYVNNGDIMKEAEEADAALSEGLQEACLKTG---RTPAAGDVKMIYYTKTGGSPRVLDDKGRMLDLESG 788
            VAD+ HWPE+RA ILV + GKK+T ST GM TSV+TSPLL  +A  V  PRLA +E AY  RDF +FGK TMQDSN FHATCLDT+PPIFY+ND   +SR  I + HA+N     I AAYTFDAGPNAV+Y  AKD  ELLA +L F+P P  G VE        Y N   ++K      AA +  L+ A L  G   RTPAAGDVKMIY T  G  PR L     +LD  +G
Sbjct:  200 VADQAHWPELRAVILVINAGKKETPSTEGMQTSVETSPLLAFRAESVVEPRLAAMEAAYRARDFEAFGKLTMQDSNQFHATCLDTYPPIFYLND---VSRQAIRLCHAFNEHKGRILAAYTFDAGPNAVIYCEAKDRDELLAFMLHFFPPPRSG-VES-------YTNKPALLK------AAAAMPLEPALLAKGNELRTPAAGDVKMIYCTAVGDGPRTLGADEALLDAATG 415
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1005.157.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FTH9_ECTSI7.360e-11673.36Diphosphomevalonate decarboxylase n=2 Tax=Ectocarp... [more]
A0A7S1DAT8_CYCTE7.040e-7557.58Diphosphomevalonate decarboxylase n=1 Tax=Cyclopho... [more]
A0A7S4J2Z5_9STRA4.570e-7256.71Diphosphomevalonate decarboxylase n=1 Tax=Odontell... [more]
A0A3G5BBY8_HASOS3.440e-6953.62Diphosphomevalonate decarboxylase n=1 Tax=Haslea o... [more]
A0A7S1ZIN1_9STRA1.820e-6855.17Diphosphomevalonate decarboxylase n=1 Tax=Ditylum ... [more]
A0A7S4AXK4_9STRA2.820e-6851.25Diphosphomevalonate decarboxylase n=1 Tax=Pseudo-n... [more]
A0A812XSB0_SYMMI3.210e-6849.58Mvd protein n=1 Tax=Symbiodinium microadriaticum T... [more]
A0A835YQZ6_9STRA9.570e-6749.25Diphosphomevalonate decarboxylase n=1 Tax=Tribonem... [more]
A0A1E7FHY1_9STRA1.580e-6650.62Diphosphomevalonate decarboxylase n=1 Tax=Fragilar... [more]
A0A7R9ULP1_DIALT2.350e-6554.51Diphosphomevalonate decarboxylase n=2 Tax=Diacrone... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1005contigF-serratus_M_contig1005:114916..118841 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score355.9
Seed ortholog evalue1.6e-95
Seed eggNOG ortholog2880.D7FTH9
Preferred nameMVD
KEGG rclassRC00453
KEGG koko:K01597
KEGG ReactionR01121
KEGG Pathwayko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130
KEGG ModuleM00095
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0004163,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005777,GO:0005782,GO:0005829,GO:0006066,GO:0006084,GO:0006139,GO:0006163,GO:0006464,GO:0006486,GO:0006487,GO:0006488,GO:0006489,GO:0006490,GO:0006629,GO:0006637,GO:0006644,GO:0006694,GO:0006695,GO:0006696,GO:0006720,GO:0006725,GO:0006732,GO:0006753,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008202,GO:0008203,GO:0008204,GO:0008284,GO:0008299,GO:0008610,GO:0008654,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009117,GO:0009150,GO:0009240,GO:0009259,GO:0009889,GO:0009987,GO:0016125,GO:0016126,GO:0016128,GO:0016129,GO:0016829,GO:0016830,GO:0016831,GO:0019216,GO:0019218,GO:0019222,GO:0019287,GO:0019538,GO:0019637,GO:0019693,GO:0030544,GO:0031072,GO:0031907,GO:0031974,GO:0033865,GO:0033875,GO:0034032,GO:0034641,GO:0034645,GO:0035383,GO:0036211,GO:0042127,GO:0042221,GO:0042493,GO:0042579,GO:0042802,GO:0042803,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043413,GO:0043603,GO:0044107,GO:0044108,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044267,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044438,GO:0044439,GO:0044444,GO:0044446,GO:0044464,GO:0045540,GO:0046165,GO:0046465,GO:0046483,GO:0046490,GO:0046890,GO:0046983,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0050810,GO:0050896,GO:0051186,GO:0055086,GO:0062012,GO:0065007,GO:0070013,GO:0070085,GO:0071704,GO:0072521,GO:0080090,GO:0090181,GO:0090407,GO:0097384,GO:0106118,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617,GO:1902652,GO:1902653,GO:1902930
EggNOG free text desc.diphosphomevalonate decarboxylase activity
EggNOG OGsCOG3407@1,KOG2833@2759
EC4.1.1.33
COG Functional cat.I
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Exons7
Model size1278
Cds size807
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928797.7095966-UTR-F-serratus_M_contig1005:114915..1149441622928797.7095966-UTR-F-serratus_M_contig1005:114915..114944Fucus serratus maleUTRF-serratus_M_contig1005 114916..114944 +
1690962576.6158903-UTR-F-serratus_M_contig1005:114915..1149441690962576.6158903-UTR-F-serratus_M_contig1005:114915..114944Fucus serratus maleUTRF-serratus_M_contig1005 114916..114944 +
1622928797.8032947-UTR-F-serratus_M_contig1005:118399..1188411622928797.8032947-UTR-F-serratus_M_contig1005:118399..118841Fucus serratus maleUTRF-serratus_M_contig1005 118400..118841 +
1690962576.6979446-UTR-F-serratus_M_contig1005:118399..1188411690962576.6979446-UTR-F-serratus_M_contig1005:118399..118841Fucus serratus maleUTRF-serratus_M_contig1005 118400..118841 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928797.722417-CDS-F-serratus_M_contig1005:114944..1150131622928797.722417-CDS-F-serratus_M_contig1005:114944..115013Fucus serratus maleCDSF-serratus_M_contig1005 114945..115013 +
1690962576.627278-CDS-F-serratus_M_contig1005:114944..1150131690962576.627278-CDS-F-serratus_M_contig1005:114944..115013Fucus serratus maleCDSF-serratus_M_contig1005 114945..115013 +
1622928797.733012-CDS-F-serratus_M_contig1005:115478..1155631622928797.733012-CDS-F-serratus_M_contig1005:115478..115563Fucus serratus maleCDSF-serratus_M_contig1005 115479..115563 +
1690962576.6363242-CDS-F-serratus_M_contig1005:115478..1155631690962576.6363242-CDS-F-serratus_M_contig1005:115478..115563Fucus serratus maleCDSF-serratus_M_contig1005 115479..115563 +
1622928797.7452376-CDS-F-serratus_M_contig1005:116101..1161541622928797.7452376-CDS-F-serratus_M_contig1005:116101..116154Fucus serratus maleCDSF-serratus_M_contig1005 116102..116154 +
1690962576.645819-CDS-F-serratus_M_contig1005:116101..1161541690962576.645819-CDS-F-serratus_M_contig1005:116101..116154Fucus serratus maleCDSF-serratus_M_contig1005 116102..116154 +
1622928797.758071-CDS-F-serratus_M_contig1005:116661..1168221622928797.758071-CDS-F-serratus_M_contig1005:116661..116822Fucus serratus maleCDSF-serratus_M_contig1005 116662..116822 +
1690962576.6562598-CDS-F-serratus_M_contig1005:116661..1168221690962576.6562598-CDS-F-serratus_M_contig1005:116661..116822Fucus serratus maleCDSF-serratus_M_contig1005 116662..116822 +
1622928797.7674644-CDS-F-serratus_M_contig1005:117177..1173661622928797.7674644-CDS-F-serratus_M_contig1005:117177..117366Fucus serratus maleCDSF-serratus_M_contig1005 117178..117366 +
1690962576.6667318-CDS-F-serratus_M_contig1005:117177..1173661690962576.6667318-CDS-F-serratus_M_contig1005:117177..117366Fucus serratus maleCDSF-serratus_M_contig1005 117178..117366 +
1622928797.7770014-CDS-F-serratus_M_contig1005:117829..1179711622928797.7770014-CDS-F-serratus_M_contig1005:117829..117971Fucus serratus maleCDSF-serratus_M_contig1005 117830..117971 +
1690962576.6771266-CDS-F-serratus_M_contig1005:117829..1179711690962576.6771266-CDS-F-serratus_M_contig1005:117829..117971Fucus serratus maleCDSF-serratus_M_contig1005 117830..117971 +
1622928797.7862437-CDS-F-serratus_M_contig1005:118291..1183991622928797.7862437-CDS-F-serratus_M_contig1005:118291..118399Fucus serratus maleCDSF-serratus_M_contig1005 118292..118399 +
1690962576.6870997-CDS-F-serratus_M_contig1005:118291..1183991690962576.6870997-CDS-F-serratus_M_contig1005:118291..118399Fucus serratus maleCDSF-serratus_M_contig1005 118292..118399 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1005.157.1prot_F-serratus_M_contig1005.157.1Fucus serratus malepolypeptideF-serratus_M_contig1005 114945..118399 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig1005.157.1

>prot_F-serratus_M_contig1005.157.1 ID=prot_F-serratus_M_contig1005.157.1|Name=mRNA_F-serratus_M_contig1005.157.1|organism=Fucus serratus male|type=polypeptide|length=269bp
MANIEFPTPRVVISPGFGSRDMEVADEHHWPEMRAFILVASPGKKDTSST
AGMSTSVQTSPLLGLKARKVAPPRLAEIEKAYLERDFASFGKSTMQDSNH
FHATCLDTFPPIFYMNDMSYISRSVIPIIHAYNAFHDEIRAAYTFDAGPN
AVVYHLAKDSAELLALLLRFYPAPGDGSVEDNASRSGEYVNNGDIMKEAE
EADAALSEGLQEACLKTGRTPAAGDVKMIYYTKTGGSPRVLDDKGRMLDL
ESGDVIDPTPSCSNGTSS*
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mRNA from alignment at F-serratus_M_contig1005:114916..118841+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig1005.157.1 ID=mRNA_F-serratus_M_contig1005.157.1|Name=mRNA_F-serratus_M_contig1005.157.1|organism=Fucus serratus male|type=mRNA|length=3926bp|location=Sequence derived from alignment at F-serratus_M_contig1005:114916..118841+ (Fucus serratus male)
AGGACCTGATCCGATTTGTCGCGCCAGAGATGGCTAACATTGAGTTCCCG
ACTCCACGCGTCGTGATATCGCCGGGTTTTGGGTCTCGCGACATGGAGGT
GTGTATTTCTGTTCTAATAACTCGTTTTCAGGGGTGTATGCATGTATGTA
AAGCTATTTATCTGTTCATGTACATAGTTTCTTGTATCTTATGTAGTATA
TATATATCAATGTACTGATATGTGTTAATGCATGAATGTATGTTTATGTA
ACTGTCGTTGTAGTCATGCTATCTATATGCTACTCCCATTGGTCCCTCCC
ATGAAGGGACGTCTTTTAAGTGTATGTGTGTTTTCTGCACGTTAACCGAT
TGGCCACTTACCGCACATCCTATTAACAGTAGCATTTACTGCTTTCCCTC
CGTGGAAAAATGATGAAGGCGTTTTCTCTTTTGTCAAAGTTCGCGGCACA
CCCTTACCCTATCGTAGGCATATAAACACTTTGGATACTGTATATTAATA
GTAGCGTTTCAAGTTGTTACTGTAGGGTTATTCAGATCGAGTTGTGTGTG
TGCGTGTGTGCAGGTGGCGGATGAGCACCACTGGCCGGAGATGCGAGCCT
TTATCTTGGTGGCCTCCCCTGGAAAGAAAGACACTTCTAGCACCGCGGGT
GAGTCATGGTCATGGTCATGCTTTAATGCTATCATGCGATCGAAACGTTT
GAAAAGAACGCCTTCCCCCCCGCCGCCCTCCCCCTCCCTCTCGCCGTTTG
GTCATGTTGTCAAATCAATCGTCAAAATCGAAACATACGGGCCCACTACG
ACATACTGTGCCGGTGTTCATAGCGAGTTTTGGAGATGAGTTTGGGTAAA
GAGGCGTTTGTTGATTGGTCTACGGGGTTTACTAAATATACTCAGCATCT
GTAACTCTGACTACATTACCGTACTAGTCTAAGCTAGTATCAGTACTTTA
TAGTTACACCCACGTACAATCTCTTGGAGCTACAGTACTGTATTCTGTCA
TATTAAGTTAATAATACTAGAGTGTCTATTGTACTGATCTTGGTACAAGC
AGGAGTACTGTACAGTACTTGTGATAAAAGAGTCGATCTCAATTTGCGAT
TTCGGCACAGAACATTAAAATCCCAACCGAAACAAAACAAATTACATTGC
ATCGTACTGTAACTTTTGATTCCATTGTCGATACAGGTATGTCTACAAGC
GTCCAGACGAGCCCGCTTCTAGGCTTGAAGGCCCGAAAGGTGGGTACTCA
CTACAGCATATGTATACCCGGGCGTCAAAATATGACGATTCCAAACTATC
CCATCTCATCCCGTCCCGTCCTCGCCACATGTAATGTCGGGTCTGAAACT
AACCACATTATCCGTTGTCGCACCTGCGTTGTATCGTCACCTCATCACCT
TATCTGTTACTCAATAATAGTATTATGTACAGTATACGTAACTCTTCCGT
TAACTGAATTCCATTTTCATCAGGTATTCATAGTACGTGTACTAATGTGC
ATGCACTCCACTTGTGTCACTCTATATCCCGAACCGCTCTACGCATACGT
CTTGTACCGTGTACCCACTGACTGCACTCTACATGTCACACGATTTCCAT
TATTCATCATATCAGTCATCATTCATAATTCTTCACCCTGCAGTTGTAGT
TCTAAAGCTACTGTAGGCTACTACAGTATTACAGTACAACCATCAATCAT
CGGTTGTAAAATGTTAATCACGTATCTTGTGTGCCCGCTAAAAAAGGTCG
CACCACCCCGTCTGGCGGAAATCGAGAAGGCTTACCTCGAGAGAGACTTT
GCGTCCTTTGGGAAGAGCACCATGCAGGACAGCAACCATTTCCACGCTAC
GTGCCTCGACACCTTCCCGCCCATATTCTACATGAACGACATGAGTTACA
TAAGCAGGTGACGTGACGTGACAACGTGACTTTTTTTGGAGGGTATGTAT
CCATGTTTTTATTAGGCTGTCTTGTTTGTTATTAAAGGCGCCAGGAGTAG
CGTTCGTCGTCATATACCATATCCTAGTAAAAGCGCGCTACCATTAATGC
TACCCTCAATACCATAATATGTCGAAGGTTGCCACGCGAAAGCCTAAATA
GCTCGTATCAAAGAATGTTATTATACTTGTATTTACTACAGTACTACAGT
ACCATACCGCAATGGGGGTCACGCCGTGCTACATTACTTTATACCAGTAT
GCTGTAGATATTATTTTTTGTGTTCGTGTCTTACAAAAAATCTATTCATA
CTTTATTGCAAGGTCCGTGATCCCGATCATCCACGCCTACAACGCCTTCC
ACGATGAGATTCGAGCGGCCTACACCTTCGACGCTGGACCGAACGCGGTG
GTGTACCACCTTGCAAAGGATTCCGCCGAGCTCCTGGCGCTTCTGCTGCG
GTTCTATCCCGCTCCGGGCGACGGATCAGTCGAAGACAATGCCTCGCGTA
GGTGGGTTGAGTACCGGTACCTTTTCCCGTAGTCTCCCGTCCGTCAAGAC
TCTTAACGACGTGCAACGGGTGTAAGGTGTAAGTTGCCGTGACTAATAAG
TTTGTTTTGGCGTAAATAGCAGGCCTCAGCTCTTTCACGGAAAGGGAGTT
TGGCGGCGAGTTATTTCTTTTTAATTTAAAAACACAATAAAACCTTGTAA
AAGTCGAAGGATCTTGTGGTCTCCAATAAATTGTTGGAGCGGTGCTCGTT
CGAGTTCGCGTGGATGGGTTTTGTCTTAGTTTTAGAAAGGTAATGCCTTG
TTGTTGTTGATTGTTTTTCACTTAACGCGCGGGAGGCGGGAGGCGGGGGG
CTTTTTATCTCCGCCTTTCTCTTTTGATACGATTCTAATTACCATACCAT
AGTATTTATTGCTGGTAACTTGTATTTTTTGGGTTTCGCGCATATCACCA
ATCAACGCCGGCAGCGGTGAGTACGTGAACAACGGGGATATAATGAAGGA
GGCGGAAGAGGCGGACGCCGCCCTTTCCGAGGGTCTCCAAGAGGCGTGCT
TGAAGACGGGGAGGACTCCCGCGGCCGGCGACGTCAAGATGATTTACTAC
ACGAAGGTAAAATTTACAGTGCGTCTTGTATTCTTTCTTTGGTACATTCC
ACTACGTGTCTCTCATTCGATATCCTTTCTGGGAGTTTGTAGAGGTAGAA
AGGGGAAGAACAGTTTAATCATCTGCTGCGATTAACAAGACCAGGAAATA
ATCGACTATCAAAACAGTTATTGTTAGTCTTTATTCAAGTATTAGTACTA
GTGGTACTTCGGAACATCGTGGTTTACGTGTCGGTACTCTGAAGAACTGT
CTCTCCATACCCCCTTTGACCAATCTAATCCTCCGCAATGATACCATCGT
TCTACTCTTATCCTACCGTTGGGCAGACCGGTGGCTCTCCTCGAGTGCTG
GATGACAAGGGGCGCATGCTGGATCTGGAGAGCGGAGATGTAATCGATCC
CACGCCCAGTTGCTCTAATGGTACATCATCATAGGAGACGAGATAGAGCA
CACGCTATAGAGGGTAGCACGCAGGCGCTGGCTGTCCCCGAGTGACGTAA
CCGCACAGCATAGGATGGTACTGACCTCTTTAATTTATTAATAGGCGTTC
GAGATACAAAACATTATGGGACATGATGGGGGTGTTTTACGAGGATACGA
TAGAGAGCTGATGGGTTGCATCGGTTTTTGCAGGAATAAGCCAAATATTT
CATCGTTCTGTGTATTGTTTTGATGAATACCACGAATGCCGCCAAAAACG
GCCAAAATATATTTCCGTTTCTCTGGAGAGTCAGAAAACTGTTTTCGTAC
ATTGGCTATAGGCCTTTACCCATAGATTTTTCGGCAGATTTGGCCAAAAA
GTGTAGATGCAAAAGCAGATCTTGAAAAGAGCAGATCTCAAGCAGATTCA
GGGCCATCATAAACAGGAGGTGTGCT
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Coding sequence (CDS) from alignment at F-serratus_M_contig1005:114916..118841+

>mRNA_F-serratus_M_contig1005.157.1 ID=mRNA_F-serratus_M_contig1005.157.1|Name=mRNA_F-serratus_M_contig1005.157.1|organism=Fucus serratus male|type=CDS|length=1614bp|location=Sequence derived from alignment at F-serratus_M_contig1005:114916..118841+ (Fucus serratus male)
ATGGCTAACATTGAGTTCCCGACTCCACGCGTCGTGATATCGCCGGGTTT
TGGGTCTCGCGACATGGAGATGGCTAACATTGAGTTCCCGACTCCACGCG
TCGTGATATCGCCGGGTTTTGGGTCTCGCGACATGGAGGTGGCGGATGAG
CACCACTGGCCGGAGATGCGAGCCTTTATCTTGGTGGCCTCCCCTGGAAA
GAAAGACACTTCTAGCACCGCGGGTGGCGGATGAGCACCACTGGCCGGAG
ATGCGAGCCTTTATCTTGGTGGCCTCCCCTGGAAAGAAAGACACTTCTAG
CACCGCGGGTATGTCTACAAGCGTCCAGACGAGCCCGCTTCTAGGCTTGA
AGGCCCGAAAGGTATGTCTACAAGCGTCCAGACGAGCCCGCTTCTAGGCT
TGAAGGCCCGAAAGGTCGCACCACCCCGTCTGGCGGAAATCGAGAAGGCT
TACCTCGAGAGAGACTTTGCGTCCTTTGGGAAGAGCACCATGCAGGACAG
CAACCATTTCCACGCTACGTGCCTCGACACCTTCCCGCCCATATTCTACA
TGAACGACATGAGTTACATAAGCAGGTCGCACCACCCCGTCTGGCGGAAA
TCGAGAAGGCTTACCTCGAGAGAGACTTTGCGTCCTTTGGGAAGAGCACC
ATGCAGGACAGCAACCATTTCCACGCTACGTGCCTCGACACCTTCCCGCC
CATATTCTACATGAACGACATGAGTTACATAAGCAGGTCCGTGATCCCGA
TCATCCACGCCTACAACGCCTTCCACGATGAGATTCGAGCGGCCTACACC
TTCGACGCTGGACCGAACGCGGTGGTGTACCACCTTGCAAAGGATTCCGC
CGAGCTCCTGGCGCTTCTGCTGCGGTTCTATCCCGCTCCGGGCGACGGAT
CAGTCGAAGACAATGCCTCGCGTAGGTCCGTGATCCCGATCATCCACGCC
TACAACGCCTTCCACGATGAGATTCGAGCGGCCTACACCTTCGACGCTGG
ACCGAACGCGGTGGTGTACCACCTTGCAAAGGATTCCGCCGAGCTCCTGG
CGCTTCTGCTGCGGTTCTATCCCGCTCCGGGCGACGGATCAGTCGAAGAC
AATGCCTCGCGTAGCGGTGAGTACGTGAACAACGGGGATATAATGAAGGA
GGCGGAAGAGGCGGACGCCGCCCTTTCCGAGGGTCTCCAAGAGGCGTGCT
TGAAGACGGGGAGGACTCCCGCGGCCGGCGACGTCAAGATGATTTACTAC
ACGAAGCGGTGAGTACGTGAACAACGGGGATATAATGAAGGAGGCGGAAG
AGGCGGACGCCGCCCTTTCCGAGGGTCTCCAAGAGGCGTGCTTGAAGACG
GGGAGGACTCCCGCGGCCGGCGACGTCAAGATGATTTACTACACGAAGAC
CGGTGGCTCTCCTCGAGTGCTGGATGACAAGGGGCGCATGCTGGATCTGG
AGAGCGGAGATGTAATCGATCCCACGCCCAGTTGCTCTAATGGTACATCA
TCATAGACCGGTGGCTCTCCTCGAGTGCTGGATGACAAGGGGCGCATGCT
GGATCTGGAGAGCGGAGATGTAATCGATCCCACGCCCAGTTGCTCTAATG
GTACATCATCATAG
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