prot_F-serratus_M_contig1002.133.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_F-serratus_M_contig1002.133.1
Unique Name	prot_F-serratus_M_contig1002.133.1
Type	polypeptide
Organism	Fucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length	254

Homology

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BLAST of mRNA_F-serratus_M_contig1002.133.1 vs. uniprot
Match: D8LTA2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTA2_ECTSI)

HSP 1 Score: 213 bits (541), Expect = 3.520e-65
Identity = 138/267 (51.69%), Postives = 171/267 (64.04%), Query Frame = 0

Query:    1 MIARSFSRASLSAANHARARARMCTAALVEATSAFARTPP--------PPPQHPYPF---HLPTTARFVTGRRHMSSRRKNLNEKNQEKMIDVTPIGTKPWQIAAEAIAEAEAAEPLKDDEVGQDDANPANLESGNPSEWEYNEATE----------SGRPGGQDEANE---NPPTPILDAYERSKDPVEMERLIQMAFDSLPERAGPQRYNHKKREKLRYKTIRNIKYKEKAQRMAAYERKLQKRRDRKAREQALFATWRGTGDSD 243
            M+ARS SR +  +A       R C ++LV   ++ +  P         P    P  +    LP  ++  + RRH+SS R   +    E  +DVTPIG KP QI  EAIAEAEA+E L DD++           SG PS+WEY+ +TE          +GR G +DE +E   NPPTPILDAYE+S+DP EMERLI +AFDSLPERAGPQRYNHK+RE  RY+TIRNIKYKEKAQR AA+ERKLQKRRDRKAR+ ALFATWR TG ++
Sbjct:    2 MLARSISRVAAGSARRVHDGQRACISSLVGGCNSPSSMPAVDESAAARPKVSRPAAWGVASLPEPSKVGSCRRHLSSGRPPFDMGEDENEVDVTPIGNKPGQITREAIAEAEASEDLDDDDIF----------SGKPSDWEYDASTEEAGHDSEKAEAGREGFRDEGDEGDENPPTPILDAYEKSRDPAEMERLIALAFDSLPERAGPQRYNHKRREHQRYRTIRNIKYKEKAQRTAAHERKLQKRRDRKARDLALFATWRETGPAE 258

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BLAST of mRNA_F-serratus_M_contig1002.133.1 vs. uniprot
Match: A0A6H5JLM8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLM8_9PHAE)

HSP 1 Score: 100 bits (248), Expect = 1.240e-20
Identity = 61/107 (57.01%), Postives = 72/107 (67.29%), Query Frame = 0

Query:   92 IAAEAIAEAEAAEPLKDDEVGQDDANPANLESGNPSEWEYNEATE----------SGRPGGQDEANE---NPPTPILDAYERSKDPVEMERLIQMAFDSLPERAGPQ 185
            I  EAIAEAEA+E L DD++           SG PS+WEY+ +TE          +GR G QDE +E   NPPTPILDAYE+S+DP EMERLI +AFDSLPERAGPQ
Sbjct:    8 ITREAIAEAEASEDLDDDDIF----------SGKPSDWEYDASTEEVRHDSEEAEAGREGLQDEGHEGEENPPTPILDAYEKSRDPAEMERLIALAFDSLPERAGPQ 104

The following BLAST results are available for this feature:

BLAST of mRNA_F-serratus_M_contig1002.133.1 vs. uniprot

BLAST of mRNA_F-serratus_M_contig1002.133.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D8LTA2_ECTSI	3.520e-65	51.69	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5JLM8_9PHAE	1.240e-20	57.01	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 205..232
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..36
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 37..253
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 24..29
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..23
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 30..36

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
F-serratus_M_contig1002	contig	F-serratus_M_contig1002:180549..183281 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Fucus serratus MALE	2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90	2022-09-16
OGS1.0 of Fucus serratus male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_F-serratus_M_contig1002.133.1	mRNA_F-serratus_M_contig1002.133.1	Fucus serratus male	mRNA	F-serratus_M_contig1002 180472..184082 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_F-serratus_M_contig1002.133.1 ID=prot_F-serratus_M_contig1002.133.1|Name=mRNA_F-serratus_M_contig1002.133.1|organism=Fucus serratus male|type=polypeptide|length=254bp
MIARSFSRASLSAANHARARARMCTAALVEATSAFARTPPPPPQHPYPFH
LPTTARFVTGRRHMSSRRKNLNEKNQEKMIDVTPIGTKPWQIAAEAIAEA
EAAEPLKDDEVGQDDANPANLESGNPSEWEYNEATESGRPGGQDEANENP
PTPILDAYERSKDPVEMERLIQMAFDSLPERAGPQRYNHKKREKLRYKTI
RNIKYKEKAQRMAAYERKLQKRRDRKAREQALFATWRGTGDSDTASAAAT
IKD*