prot_F-serratus_M_contig100.106.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig100.106.1
Unique Nameprot_F-serratus_M_contig100.106.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length1157
Homology
BLAST of mRNA_F-serratus_M_contig100.106.1 vs. uniprot
Match: A0A6H5KR55_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KR55_9PHAE)

HSP 1 Score: 205 bits (521), Expect = 3.320e-55
Identity = 126/269 (46.84%), Postives = 169/269 (62.83%), Query Frame = 0
Query:  306 ATGNGVNI---RKVVVAEQEATAFSLVDAVQAALGVSRPSSSLLDGVDNDEDLGCTRHTPFWCLTIQRCQLFYLVPTTRLLHLMRRMCGMDIVECTGLVLTGLEQILIDANCLRTLTIRRCGLTRLPQLRSGSVEVLDLSENCIKSTAGLETLFRLKRLNLASNSIRNVMGLRPLIPLGTGCLRELNLHGNPVQETTRYRPVIEAMIPSIQVLDGVTVS---RRRSGKIPAGMSTERGRSHKSPSTPRAGRTRARSVDGFVSGEGTTYS 568
            A+G GV+I   RKV +  Q  T+  L D V+A LG+    ++    VD+ ++         W LT ++CQL  L+P   LLH +  + G+ I    GL L G+E++L DA CL TLTIR CGL RLP+L+SGS+EVLD S N I+S AGLETLFRL+ LNLA N IR +  LRPL+PLGTG LRELNL  NPVQ++ RYR  + A+ PSIQ+LDG+  S   R R+   P  M+ E G + ++ STP   R R    +G+ S +G T++
Sbjct:   30 ASGRGVSIGEIRKVDLVGQAVTSLGLADVVEATLGIPTTPAAPSRHVDDTKERKDMCDLLLWSLTFRQCQLESLLPVAGLLHHLDGLIGLGIHGTDGLALAGIERVLADARCLCTLTIRDCGLARLPRLQSGSIEVLDFSNNAIESAAGLETLFRLQELNLAGNRIRTLSDLRPLLPLGTGRLRELNLENNPVQDSPRYRESVLAVFPSIQLLDGIAKSQKWRMRTATKP-NMAGEEGHNRRACSTPP--RVRNAFAEGYFS-DGATWN 294          
BLAST of mRNA_F-serratus_M_contig100.106.1 vs. uniprot
Match: D7G481_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G481_ECTSI)

HSP 1 Score: 187 bits (476), Expect = 2.660e-50
Identity = 107/207 (51.69%), Postives = 138/207 (66.67%), Query Frame = 0
Query:  364 WCLTIQRCQLFYLVPTTRLLHLMRRMCGMDIVECTGLVLTGLEQILIDANCLRTLTIRRCGLTRLPQLRSGSVEVLDLSENCIKSTAGLETLFRLKRLNLASNSIRNVMGLRPLIPLGTGCLRELNLHGNPVQETTRYRPVIEAMIPSIQVLDGVTVSRRRSGKIPAGMST--ERGRSHKSPSTPRAGRTRARSVDGFVSGEGTTYS 568
            W LT ++CQL  L+P   LLH +  + G+ I    GL L G+E++L DA CL TLTIR C L RLP+L+SGS+EVLD+S N I+S AGLETLFRLK LNLA N IR + GLRPL+PLGTG LRELNL  NPVQ T RYR  + A+ PSIQ+LDG+  S++   +     +T  E G   ++ STP   R R    +G+ S +G T++
Sbjct:    7 WSLTFRQCQLESLLPVAGLLHHLDGLIGLGIHGIDGLTLAGVERVLADARCLCTLTIRHCRLARLPRLQSGSIEVLDISNNAIESAAGLETLFRLKELNLAGNRIRTLSGLRPLVPLGTGRLRELNLDSNPVQNTPRYRESVLAVFPSIQLLDGIAKSQKWRMRTATKTNTVGEEGHDRRACSTPP--RVRNAFSEGYFS-DGATWN 210          
BLAST of mRNA_F-serratus_M_contig100.106.1 vs. uniprot
Match: A0A6H5KJJ5_9PHAE (EF-hand domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJJ5_9PHAE)

HSP 1 Score: 57.4 bits (137), Expect = 3.110e-6
Identity = 27/40 (67.50%), Postives = 30/40 (75.00%), Query Frame = 0
Query:  970 FKVELDQEEARSLYHQLDSDRDGVLGAEDLLRGAPIIAKL 1009
            + V+L  EEAR LY QLDSDRDG LGAEDLLRGA  +A  
Sbjct:    5 YPVDLSGEEARCLYQQLDSDRDGALGAEDLLRGASTVASF 44          
BLAST of mRNA_F-serratus_M_contig100.106.1 vs. uniprot
Match: A0A074ZR27_9TREM (Uncharacterized protein n=2 Tax=Opisthorchiidae TaxID=6196 RepID=A0A074ZR27_9TREM)

HSP 1 Score: 61.2 bits (147), Expect = 1.430e-5
Identity = 42/117 (35.90%), Postives = 63/117 (53.85%), Query Frame = 0
Query:  415 LRTLTIRRCGLTRLPQLRSGSVEVLDLSENCIKSTAGLETLFRLKRLNLASNSIRNVMGLRPLIPLGTGC--LRELNLHGNPVQETTRYRPVIEAMIPSIQVLDG--VTVSRRRSGK 527
            L  L I  C L  LP L +  ++ LDLS N + +   L +L RLK LN+  N + N+   + +I +   C  L++LNL  NP +  T  R  + A +PSI+ +DG  VT + R S +
Sbjct:  699 LTVLFINHCRLRVLPTLANLPLQSLDLSHNLLPTLTNLNSLPRLKVLNVNYNILTNLF--QDVITISNSCTKLQDLNLQFNPWKVPTEVRLFVAAYLPSIETIDGYLVTANDRESAE 813          
BLAST of mRNA_F-serratus_M_contig100.106.1 vs. uniprot
Match: A0A4S2MFB7_OPIFE (Uncharacterized protein n=1 Tax=Opisthorchis felineus TaxID=147828 RepID=A0A4S2MFB7_OPIFE)

HSP 1 Score: 61.2 bits (147), Expect = 1.430e-5
Identity = 40/108 (37.04%), Postives = 56/108 (51.85%), Query Frame = 0
Query:  415 LRTLTIRRCGLTRLPQLRSGSVEVLDLSENCIKSTAGLETLFRLKRLNLASNSIRNVMGLRPLIPLGTGC--LRELNLHGNPVQETTRYRPVIEAMIPSIQVLDGVTV 520
            L  L+I  C L  LP L +  ++ LDLS N + +   L +L RLK LN+  N + N      +I +   C  LR+LNL  NP +  T  R  + A +PSI  +DG  V
Sbjct:  703 LTILSINHCRLRVLPTLANLPLQSLDLSHNLLPTLTNLNSLPRLKVLNVNYNMLTNAFP--DVIAISNACTKLRDLNLQFNPWKAPTEVRLFVAAYVPSINTIDGYMV 808          
BLAST of mRNA_F-serratus_M_contig100.106.1 vs. uniprot
Match: A0A3R7D324_CLOSI (Poly(A)-specific ribonuclease (Fragment) n=1 Tax=Clonorchis sinensis TaxID=79923 RepID=A0A3R7D324_CLOSI)

HSP 1 Score: 58.9 bits (141), Expect = 7.830e-5
Identity = 41/119 (34.45%), Postives = 61/119 (51.26%), Query Frame = 0
Query:  415 LRTLTIRRCGLTRLPQLRSGSVEVLDLSENCIKSTAGLETLFRLKRLNLASNSIRNVMGLRPLIPLGTGC--LRELNLHGNPVQETTRYRPVIEAMIPSIQVLDGVTV---SRRRSGKI 528
            L  L+I  C L  LP L +  ++ LDLS N + +   L +L RLK LN+  N + N+     +I +   C  L++LNL  NP +  T     + A +PSI+ +DG  V    R  +G I
Sbjct: 1808 LTVLSINHCRLRVLPALANLPLQSLDLSHNLLPTLTNLNSLPRLKVLNVNYNMLTNLF--LDVITISNSCTKLQDLNLQFNPWKALTEVHLFVAAYLPSIKTVDGYLVPDNDRESAGNI 1924          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig100.106.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A6H5KR55_9PHAE3.320e-5546.84Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G481_ECTSI2.660e-5051.69Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
A0A6H5KJJ5_9PHAE3.110e-667.50EF-hand domain-containing protein n=1 Tax=Ectocarp... [more]
A0A074ZR27_9TREM1.430e-535.90Uncharacterized protein n=2 Tax=Opisthorchiidae Ta... [more]
A0A4S2MFB7_OPIFE1.430e-537.04Uncharacterized protein n=1 Tax=Opisthorchis felin... [more]
A0A3R7D324_CLOSI7.830e-534.45Poly(A)-specific ribonuclease (Fragment) n=1 Tax=C... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 398..525
e-value: 7.0E-20
score: 72.8
NoneNo IPR availablePANTHERPTHR46652:SF4LEUCINE-RICH REPEAT-CONTAINING PROTEIN 9coord: 408..480
NoneNo IPR availablePANTHERPTHR46652:SF4LEUCINE-RICH REPEAT-CONTAINING PROTEIN 9coord: 403..537
NoneNo IPR availablePANTHERPTHR46652FAMILY NOT NAMEDcoord: 403..537
coord: 408..480
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 403..522
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 987..999
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 457..478
score: 7.442
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 435..456
score: 7.496
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 484..505
score: 5.086
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 974..1009
score: 8.962

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig100contigF-serratus_M_contig100:397347..419496 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig100.106.1mRNA_F-serratus_M_contig100.106.1Fucus serratus malemRNAF-serratus_M_contig100 397189..419532 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig100.106.1 ID=prot_F-serratus_M_contig100.106.1|Name=mRNA_F-serratus_M_contig100.106.1|organism=Fucus serratus male|type=polypeptide|length=1157bp
MSTLEWTLSDWNCSDRDDDGVGAPVTGITDGTPQACEEFVKQTQGIDEAA
ETVPLQHDRHRDYRRSYHNTRGATSRIIDGRATNNPAPTSSTARREPRRD
ACTTSDQDHNGGHDDGSVSLTATTQAFDAPGESQSLHSSNHNRHMEPRRT
RSKMQHQNTVASGDERLPQRDGYFTEEELRPLPLGDTVALEDVARDCVSP
LLPSVEEQHHAPRQDNGLTSKNNQDTSPVPVLLAAGDHAQDGRFEVVKAI
APCKEDVCVNWDDARGKEKQLLQQQPPKTDHVDGIGNRAPESDADAGADA
HGHLRATGNGVNIRKVVVAEQEATAFSLVDAVQAALGVSRPSSSLLDGVD
NDEDLGCTRHTPFWCLTIQRCQLFYLVPTTRLLHLMRRMCGMDIVECTGL
VLTGLEQILIDANCLRTLTIRRCGLTRLPQLRSGSVEVLDLSENCIKSTA
GLETLFRLKRLNLASNSIRNVMGLRPLIPLGTGCLRELNLHGNPVQETTR
YRPVIEAMIPSIQVLDGVTVSRRRSGKIPAGMSTERGRSHKSPSTPRAGR
TRARSVDGFVSGEGTTYSGEYVRGLAGLGMIWAGDRSARRACWRSSSSAP
PSPAGMRRTQSTTWSGSASTDVFDPGDPKAVFGSIDWTGTRTSPRASPSQ
RLHSPWRCRQIDADTCRSKPKVDWTQRLRLLEEQGELLPGNCAKAQSARR
SRSRQIASTERLSQPLRRLLLKENVGHSNYSSCPCCSNKPEFDTTSLFAD
QRASQVGDSSTVSTIKATTLAESLALVNRPTAFKGPDGKWEGVTVVVTKA
AKKKALRSKPTTASPPLPDPAAASAVSTAPDAWCWRTAPCPRSHSDPRLL
QRSLQYPQASPQDPSSPSYGPSNIPARATMMLPDSWSTNQSSPSARAPRR
RPTTGAGHNIADGHGTTFSSPRAGRRCAVRRQRIQRGATPSVEAEMCRPA
KGFCGFQTPMDFADTIRRAFKVELDQEEARSLYHQLDSDRDGVLGAEDLL
RGAPIIAKLRMDSQHHPGRDDDHSPQRQGRQVQTEVVPVNAERTRNRYSA
RIRQSRTFEQMQTQLRRGSRRWEQRDYISRQPKRGPQRHGHNTRIRSRAS
HHHGLHDTLVEENNDDGCQVDASPMHLDGLDESDCIANSLEDWYLRPFFS
HSRPTK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf
IPR018247EF_Hand_1_Ca_BS
IPR001611Leu-rich_rpt
IPR002048EF_hand_dom