prot_F-serratus_M_contig10.62.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig10.62.1
Unique Nameprot_F-serratus_M_contig10.62.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length86
Homology
BLAST of mRNA_F-serratus_M_contig10.62.1 vs. uniprot
Match: A0A6H5KYH6_9PHAE (Vps54_N domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYH6_9PHAE)

HSP 1 Score: 121 bits (304), Expect = 2.890e-30
Identity = 64/82 (78.05%), Postives = 71/82 (86.59%), Query Frame = 0
Query:    3 NSSGGDGVGS----GDNLRRDLQLVVKGLLRLGEMEKVLGVVQDRLSEDLKQIIRTVVGDFLATTDDSGELMDTFHLFSDET 80
            N  GGD  G+    GD LRRDL+LVV+GLLRLGEME+VLG+VQDR+SEDLK IIRTVVGDFLATTDDSGELMDTFHLF DE+
Sbjct:  512 NGRGGDAGGAISAGGDELRRDLELVVQGLLRLGEMERVLGIVQDRVSEDLKLIIRTVVGDFLATTDDSGELMDTFHLFGDES 593          
BLAST of mRNA_F-serratus_M_contig10.62.1 vs. uniprot
Match: D7G0A0_ECTSI (Vacuolar protein sorting-associated protein 54 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0A0_ECTSI)

HSP 1 Score: 118 bits (296), Expect = 3.710e-29
Identity = 62/82 (75.61%), Postives = 71/82 (86.59%), Query Frame = 0
Query:    3 NSSGGDGVGS----GDNLRRDLQLVVKGLLRLGEMEKVLGVVQDRLSEDLKQIIRTVVGDFLATTDDSGELMDTFHLFSDET 80
            N  GG+  G+    GD +RRDL+LVV+GLLRLGEME+VLGVVQDR+SEDLK IIRTVVGDFLATTDD+GELMDTFHLF DE+
Sbjct:  427 NGRGGEAGGAISAGGDEMRRDLELVVQGLLRLGEMERVLGVVQDRVSEDLKLIIRTVVGDFLATTDDAGELMDTFHLFGDES 508          
BLAST of mRNA_F-serratus_M_contig10.62.1 vs. uniprot
Match: A0A835YJU9_9STRA (Vacuolar protein sorting-associated protein 54 (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJU9_9STRA)

HSP 1 Score: 68.9 bits (167), Expect = 1.020e-11
Identity = 37/71 (52.11%), Postives = 51/71 (71.83%), Query Frame = 0
Query:   15 NLRRDLQLVVKGLLRLGEMEKVLGVVQDRLSEDLKQIIRTVVGDFLATTDDSGELMDTFHLFSDETEGGGE 85
            +L   L  VV+ + RLG++EKVL + ++RL EDLK IIRTVVGD+L TT   GEL+DT+ L   + +GGG+
Sbjct:  440 DLEAALVPVVQAVERLGKLEKVLDMFEERLLEDLKLIIRTVVGDYLNTTGTGGELIDTYPLDDSDDDGGGD 510          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig10.62.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5KYH6_9PHAE2.890e-3078.05Vps54_N domain-containing protein n=1 Tax=Ectocarp... [more]
D7G0A0_ECTSI3.710e-2975.61Vacuolar protein sorting-associated protein 54 n=1... [more]
A0A835YJU9_9STRA1.020e-1152.11Vacuolar protein sorting-associated protein 54 (Fr... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig10contigF-serratus_M_contig10:293113..293913 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig10.62.1mRNA_F-serratus_M_contig10.62.1Fucus serratus malemRNAF-serratus_M_contig10 293111..293913 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig10.62.1 ID=prot_F-serratus_M_contig10.62.1|Name=mRNA_F-serratus_M_contig10.62.1|organism=Fucus serratus male|type=polypeptide|length=86bp
GANSSGGDGVGSGDNLRRDLQLVVKGLLRLGEMEKVLGVVQDRLSEDLKQ
IIRTVVGDFLATTDDSGELMDTFHLFSDETEGGGES
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