prot_F-serratus_M_contig1.43.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1.43.1
Unique Nameprot_F-serratus_M_contig1.43.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length159
Homology
[Close]
BLAST of mRNA_F-serratus_M_contig1.43.1 vs. uniprot
Match: UPI000D0F2FA8 (CD225/dispanin family protein n=1 Tax=Janibacter massiliensis TaxID=2058291 RepID=UPI000D0F2FA8)

HSP 1 Score: 50.4 bits (119), Expect = 3.690e-5
Identity = 27/82 (32.93%), Postives = 44/82 (53.66%), Query Frame = 0 
Query:   62 QGIVAAAGGRPPRTHCCLAWFACLFGCWPIGLIAIFMSMSVSNKIRKNDFQGAYQASRSTQRIAVIAIVAGIVMQVIYWTSY 143
            QG + A    PP  +  LA  A +F CWP  + AI  +  V+    + D  GA+ A+   ++IA+ AI+ G+V+ V++   Y
Sbjct:    7 QGSMTAVTDAPPNNNLGLA-IASIFCCWPAAIFAILEANKVNTLWAQGDRNGAHAAAAKAKKIAMWAIIGGLVLTVLFIIGY 87
[Close]
BLAST of mRNA_F-serratus_M_contig1.43.1 vs. uniprot
Match: A0A819L9I7_9BILA (Hypothetical protein n=1 Tax=Adineta steineri TaxID=433720 RepID=A0A819L9I7_9BILA)

HSP 1 Score: 50.8 bits (120), Expect = 5.060e-5
Identity = 26/66 (39.39%), Postives = 39/66 (59.09%), Query Frame = 0 
Query:   74 RTHCCLAWFACLFGCWPIGLIAIFMSMSVSNKIRKNDFQGAYQASRSTQRIAVIAIVAGIVMQVIY 139
             T CCL         WP+GLIAI MS+ V+ K+RK D +GA  AS   + +  +A + GI++ ++Y
Sbjct:   83 NTLCCL---------WPVGLIAIIMSVIVNRKLRKGDIKGARTASTWAKIMNGVATIGGIIIIILY 139
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1.43.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
UPI000D0F2FA83.690e-532.93CD225/dispanin family protein n=1 Tax=Janibacter m... [more]
A0A819L9I7_9BILA5.060e-539.39Hypothetical protein n=1 Tax=Adineta steineri TaxI... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007593CD225/Dispanin familyPFAMPF04505CD225coord: 72..139
e-value: 5.5E-17
score: 61.7
NoneNo IPR availablePANTHERPTHR14948NG5coord: 7..143
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 79..103
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..78
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 144..158
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 124..143
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 104..123
NoneNo IPR availableTMHMMTMhelixcoord: 124..146
NoneNo IPR availableTMHMMTMhelixcoord: 81..103

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1contigF-serratus_M_contig1:1613068..1639964 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1.43.1mRNA_F-serratus_M_contig1.43.1Fucus serratus malemRNAF-serratus_M_contig1 1612796..1642267 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1.43.1 ID=prot_F-serratus_M_contig1.43.1|Name=mRNA_F-serratus_M_contig1.43.1|organism=Fucus serratus male|type=polypeptide|length=159bp
MSGEHQKPYGAQQHQPYVQEAYLDPTYRIEQPYAGPAAQEVTVVGTAVTA
QPFPEVLVIEQQGIVAAAGGRPPRTHCCLAWFACLFGCWPIGLIAIFMSM
SVSNKIRKNDFQGAYQASRSTQRIAVIAIVAGIVMQVIYWTSYAGSSESS
SERSNRSN*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007593CD225/Dispanin_fam