prot_F-serratus_M_contig1.41.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1.41.1
Unique Nameprot_F-serratus_M_contig1.41.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length365
Homology
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BLAST of mRNA_F-serratus_M_contig1.41.1 vs. uniprot
Match: A0A6H5K524_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K524_9PHAE)

HSP 1 Score: 174 bits (442), Expect = 1.240e-44
Identity = 129/349 (36.96%), Postives = 176/349 (50.43%), Query Frame = 0 
Query:    1 MAAIAAAQSAFAESFPFSEYGGMFSEVSVRSSLKNIMMSGGLARLIGLLSHYLFWVILRPYALAREERDRVYLRRAMKEFGSMGETIKKSPQFERRAENNSKLLAPGPAVCRSSAGTTTPTREKPNTAANAPGKGGGLEKPCEGERGRITVATVPPVTTCRVEGRAPDDTTL--QDTAFRNKQAAPQGNRSLVPRKAWEVGTGSGGAAVDGDHDVRIQLQNEAAVRESSSDLGPSIKALTASTPREKDFGMELTREEFEALVVAVVEAWSTLRVSLGLSCYARVVRLPIAVAAIRDGVETVLCNHYPFL-TNGGSQGSRLLTAVHEEVISTFIPRFYYEGRFTQFAEVE 346
            M+AIA  Q+AFA +F F ++G  F ++SVRSSLKNI+ S G  RLIGLLSHYL+W++L P+ LA ++RD   L             +K   +   R + +   +         S+G ++       T  ++P               R+T AT    T+ + E  +    ++  +D A    +  P  + SL    A  +   S  A V      + QL+ E                              L  +E E+L VAVVE+WS+LR SLG S  AR+V LPIAVAA+R GV+TVLCN YPFL T GG +G RLL ++HEEV + FIPRFYYEG FT  AE E
Sbjct:  358 MSAIATVQAAFARNFAFHKHGEKFKDISVRSSLKNIITSEGPGRLIGLLSHYLYWIMLLPFVLAHKDRDDCVL-------------LKNDYRLSMRKQKSRVEIGDA------SSGGSSRALNSGTTVGHSP---------------RVTTATPAAATSKQGEHESNGSNSIHHEDHAEEGTEQGPHQHPSLSKEDARSLAATSNRALVPPQEAGKRQLRPE------------------------------LASDEAESLFVAVVESWSSLRSSLGASRQARLVHLPIAVAAVRHGVQTVLCNCYPFLDTKGGREGKRLLASLHEEVATRFIPRFYYEGPFTPVAEEE 642
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BLAST of mRNA_F-serratus_M_contig1.41.1 vs. uniprot
Match: D7FXB3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXB3_ECTSI)

HSP 1 Score: 83.6 bits (205), Expect = 3.750e-14
Identity = 41/69 (59.42%), Postives = 56/69 (81.16%), Query Frame = 0 
Query:    1 MAAIAAAQSAFAESFPFSEYGGMFSEVSVRSSLKNIMMSGGLARLIGLLSHYLFWVILRPYALAREERD 69
            M+AIA  Q+AFA +F F ++G  F+++SVRSSLKNI+MS G  RLIGLLSHYL+W++L P+ LA ++RD
Sbjct:  274 MSAIATVQAAFARNFSFHKHGEKFTDISVRSSLKNIIMSEGPGRLIGLLSHYLYWIMLLPFVLAHKDRD 342
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1.41.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K524_9PHAE1.240e-4436.96Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FXB3_ECTSI3.750e-1459.42Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 8..12
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 59..364
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..1
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 2..7
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 13..35
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..12
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 36..58

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1contigF-serratus_M_contig1:1336135..1348879 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1.41.1mRNA_F-serratus_M_contig1.41.1Fucus serratus malemRNAF-serratus_M_contig1 1326200..1349319 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1.41.1 ID=prot_F-serratus_M_contig1.41.1|Name=mRNA_F-serratus_M_contig1.41.1|organism=Fucus serratus male|type=polypeptide|length=365bp
MAAIAAAQSAFAESFPFSEYGGMFSEVSVRSSLKNIMMSGGLARLIGLLS
HYLFWVILRPYALAREERDRVYLRRAMKEFGSMGETIKKSPQFERRAENN
SKLLAPGPAVCRSSAGTTTPTREKPNTAANAPGKGGGLEKPCEGERGRIT
VATVPPVTTCRVEGRAPDDTTLQDTAFRNKQAAPQGNRSLVPRKAWEVGT
GSGGAAVDGDHDVRIQLQNEAAVRESSSDLGPSIKALTASTPREKDFGME
LTREEFEALVVAVVEAWSTLRVSLGLSCYARVVRLPIAVAAIRDGVETVL
CNHYPFLTNGGSQGSRLLTAVHEEVISTFIPRFYYEGRFTQFAEVEEGRI
RRQQQQQRHKRRVW*
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