prot_F-serratus_M_contig1.26.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1.26.1
Unique Nameprot_F-serratus_M_contig1.26.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length330
Homology
BLAST of mRNA_F-serratus_M_contig1.26.1 vs. uniprot
Match: D7FR62_ECTSI (Chain D, Drug Export Pathway Of Multidrug Exporter Acrb Revealed By Darpin Inhibitors pdb|2J8S|E Chain E, Drug Export Pathway Of Multidrug Exporter Acrb Revealed By Darpin Inhibitors n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR62_ECTSI)

HSP 1 Score: 117 bits (293), Expect = 1.840e-25
Identity = 93/247 (37.65%), Postives = 124/247 (50.20%), Query Frame = 0
Query:    1 MREKFDLCVPRPLETAVSMQRVGATSLQVAFLPLPEAANPLPVTRYKIKVD---EVATVICAAPSEVSDATEPRIATNAALASEAFHEHSIGARDHVEVPRTTKAGPNVPGVRCLRPSLVKIVLIPARCNKPFSNEGGR---TVVSVCGLRPETRYRVQIAAVNAVGFGSYGP-SSKVVCTAAISEEAKDHEPKEHCSNRPSRLSRGDGRERGAESSGRRKTKGRQVLAMEKRRTVAAETRRLQEHQ 240
            M+EK    VP   E   ++ RV  TSLQVA+LP PEA+  LPVTRYK+KV+   E +     AP                  +       +   ++   P                P+L K+VL+P+      ++EGGR   T+V+V GLRP TRYRV++AA+NA+GFG YGP S  VV    I  E                 +R +G   GAE +  +K KGRQVLA EKRR++AA+  RLQE Q
Sbjct:  133 MQEKGGFEVPPAPEVPPTVTRVEPTSLQVAYLPFPEASGQLPVTRYKVKVEHPGESSNQAAQAPDIAXXXXXXXXXXXXXXXNIPLDVDGVEGAENARAPPAADPDAGGDDSSFANPTLSKVVLVPSAGETNSASEGGRQKRTLVAVRGLRPATRYRVKVAAINALGFGPYGPPSDAVVLPEKIEGEXXXXXXX---------XTRENGSSVGAERA--KKGKGRQVLAREKRRSMAAQAVRLQEQQ 368          
BLAST of mRNA_F-serratus_M_contig1.26.1 vs. uniprot
Match: A0A6H5KBJ1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBJ1_9PHAE)

HSP 1 Score: 105 bits (261), Expect = 3.340e-21
Identity = 92/244 (37.70%), Postives = 132/244 (54.10%), Query Frame = 0
Query:   28 QVAFLPLPEAANPLPVTRYKIKVDEVATVICAAPSEVSDATEPRIATNAALASEAFHEHSIGARDHV--EVPRTTKAG---------PNVPG--VRCLRPSLVKIVLIPARCNKPFSNEGGR---TVVSVCGLRPETRYRVQIAAVNAVGFGSYGPSSKVVCTAAISEEAKDHEPKEHCSNRPSRLSRGDGRERGAESSGRRKTKGRQVLAMEKRRTVAAETRRLQ--------EHQQRTTAQI 247
            +VA+LP PEA+  LPVT YK+KV+  A     A ++  D TE         A+  ++ H+  +  ++   V  T  AG         P+  G       P+L K+VL+P+  +   ++EGGR   T+V+V GLRP TRYRV++AA+NA+GFG YGP S+ V    + EE +        +      +R +G   GAE +  +K KGRQVLA EKRR++AA+  RL+        E QQR  AQI
Sbjct:  321 KVAYLPFPEASGQLPVTHYKVKVEHPADSSNQA-AQAPDITE---------AANTYNVHNTTSTSNIPLNVDGTEGAGNARASPAADPDAGGDDSSFANPTLSKVVLVPSVGDTNSASEGGRQKRTLVTVRGLRPATRYRVKVAAINALGFGPYGPPSEAV---VLPEETEGXXXXXXXTT-----TRENGSSVGAERA--KKGKGRQVLAREKRRSMAAQAARLEKQQLLEAKERQQRRRAQI 544          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1.26.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FR62_ECTSI1.840e-2537.65Chain D, Drug Export Pathway Of Multidrug Exporter... [more]
A0A6H5KBJ1_9PHAE3.340e-2137.70Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 222..242
IPR036116Fibronectin type III superfamilySUPERFAMILY49265Fibronectin type IIIcoord: 16..171

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1contigF-serratus_M_contig1:782292..785505 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1.26.1mRNA_F-serratus_M_contig1.26.1Fucus serratus malemRNAF-serratus_M_contig1 781615..785590 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1.26.1 ID=prot_F-serratus_M_contig1.26.1|Name=mRNA_F-serratus_M_contig1.26.1|organism=Fucus serratus male|type=polypeptide|length=330bp
MREKFDLCVPRPLETAVSMQRVGATSLQVAFLPLPEAANPLPVTRYKIKV
DEVATVICAAPSEVSDATEPRIATNAALASEAFHEHSIGARDHVEVPRTT
KAGPNVPGVRCLRPSLVKIVLIPARCNKPFSNEGGRTVVSVCGLRPETRY
RVQIAAVNAVGFGSYGPSSKVVCTAAISEEAKDHEPKEHCSNRPSRLSRG
DGRERGAESSGRRKTKGRQVLAMEKRRTVAAETRRLQEHQQRTTAQILLR
GRGRRGVEGSLGHGSQRSSSPTEVDPERRQQATPPAQNAQSSPELQHRHN
TRKDHREDDVGGEGNRRRGIPPSSSRPVI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036116FN3_sf