mRNA_F-serratus_M_contig998.21262.1 (mRNA) Fucus serratus male
Overview
Homology
BLAST of mRNA_F-serratus_M_contig998.21262.1 vs. uniprot
Match: A0A6H5K8M2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8M2_9PHAE) HSP 1 Score: 390 bits (1001), Expect = 3.250e-122 Identity = 251/545 (46.06%), Postives = 304/545 (55.78%), Query Frame = 2 Query: 440 ESYFMFQIGELRKHQLLEVRVRCYALRHERLT--PMASDPKTKPNGGSEGDGF-------------------------------APDHGAERQQQVYFQCHSMRLQHPDDELGGNLLLVLPQ---TVVHRIDAWSPMMPPPRWNSTHGLVHWGLHSDRGAIRCRCEDPPRTRQNSLSMSVAAASAVAAGSRRSATAKTVLAAARLTSRTLRQEDKSRVGAREREKACQGLRLTSHLSSQSLSLGLQGIKDADLRAHLTRNDTKYKN--YWEETAISESATAGSERGVDGGATDRVGYVHRFPDLLKRWDDVDGDRGTWYEVMKRRMVRVEAERRKEEACRAERXXXXXXXXXXXXXXXXXXXRRGDRRPSIMKIEDVSVFPVKSGVGGLNHLEKYPEDVAARA---SNLEERKQADA----PPQSRSPESAPPGLARMSSAGRTSSATLSAAQWFAREERKAIDAFLQDRELEVVVILEGTDTATGSTVQARHSYCWENIQWNRTFASCVTQAEDGACVVDFSKFHDTVRAPEDCFDPGFVQSYA 1939 E+YFMFQIGELRKHQLLE RVRCYALRHERLT P ++ G SE G A + A QV+FQ HSMRLQHPDDELGGNLLLVLPQ TVVHRIDAWSPMMPPPRWNS+HG V WGLH+D+ ++ E+PP + ++ S + + G+ L SS S S Q ++ +L + L + ++ YWE+ + SE S RG D TD++GYVHRFPDLLKRWDDVDGDRGTWYE MKRR++RVE ERR+ E R ER R + ++ S+ V G G + +++ D + A L E +QA P SP + G A + G A L+A QWFAREERKAIDA++QDRELEVVVILEGTDT+TGSTVQARHSYCWE+I W+RTFA CVT+ EDGAC VDFSKFHDT+RAP +C D GF+QSYA Sbjct: 239 EAYFMFQIGELRKHQLLETRVRCYALRHERLTYNPCGNNNNV---GSSESSGLGARSASVSSNIXXXXXXXXXXXXXXSTTVTSAAELAARMPDQVFFQSHSMRLQHPDDELGGNLLLVLPQARGTVVHRIDAWSPMMPPPRWNSSHGPVQWGLHTDKDIVKAPWEEPPSSPEHKGERSRSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDEGDPASGM-LRKQASSNSYSTDYQNLEQEELGSRLGNQGGRRQSAVYWEDASASEFGFNVSGRGTDDD-TDKLGYVHRFPDLLKRWDDVDGDRGTWYEKMKRRVLRVEMERRRSEDMRRERERTGKTADDIRAASSRSRLAHAGFRRPLERM--ASIMHVGGGGVGEDCADEFAADRSKEAPALGRLSEGRQAPQGGLETPIGSSPVVSGSGDAPAGNGG--GRARLNAGQWFAREERKAIDAYIQDRELEVVVILEGTDTSTGSTVQARHSYCWEDILWDRTFACCVTRGEDGACEVDFSKFHDTLRAPANCDDHGFIQSYA 774
BLAST of mRNA_F-serratus_M_contig998.21262.1 vs. uniprot
Match: D8LEB6_ECTSI (IRK_C domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEB6_ECTSI) HSP 1 Score: 257 bits (657), Expect = 4.680e-77 Identity = 157/316 (49.68%), Postives = 190/316 (60.13%), Query Frame = 2 Query: 1025 LTSHLSSQSLSLGLQGIKDADLRAHLTRNDTKYKN--YWEETAISESATAGSERGVDGGATDRVGYVHRFPDLLKRWDDVDGDRGTWYEVMKRRMVRVEAERRKEEACRAERXXXXXXXXXXXXXXXXXXXRR-GDRRPSIMKIEDVSVFPVKSGVGGLNHLEKYPEDVAARASNLEERKQADAPPQS--RSPESAPPGLARMSSA------GRTSSATLSAAQWFAREERKAIDAFLQDRELEVVVILEGTDTATGSTVQARHSYCWENIQWNRTFASCVTQAEDGACVVDFSKFHDTVRAPEDCFDPGFVQSYA 1939 L SS S S Q ++ +L + L + ++ YWE+ + SE + RG D TD +GYVHRFPDLLKRWDDVDGDRGTWYE MKRR++RVE ERR+ E R ER G RRP S+ V G G + + + D + A L + PQ +P +PP L+ A GR A L+A QWFAREERKAIDA++QDRELEVVVILEGTDT+TGSTVQARHSYCWE+I W+RTFA CVT+ EDGAC VDFSKFHDT+RAP +C D GF+QSYA Sbjct: 2 LRKQASSSSFSTDYQNLEQEELGSRLGNQGGRRQSAVYWEDASASEFGVNVNGRGTDDD-TDNLGYVHRFPDLLKRWDDVDGDRGTWYEKMKRRLLRVEMERRRSEDMRRERERTGKTADDIRAASSRSRLAHAGFRRPPERM---ASIMRVGGGGVGEDCADDFAADRSKEAPALGRLSEGRQAPQGGLETPIGSPPVLSGSGDAPAGNGGGR---ARLNAGQWFAREERKAIDAYIQDRELEVVVILEGTDTSTGSTVQARHSYCWEDILWDRTFACCVTRGEDGACEVDFSKFHDTLRAPANCDDHGFIQSYA 310
BLAST of mRNA_F-serratus_M_contig998.21262.1 vs. uniprot
Match: D8LEB7_ECTSI (IRK domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEB7_ECTSI) HSP 1 Score: 186 bits (473), Expect = 2.270e-50 Identity = 93/147 (63.27%), Postives = 121/147 (82.31%), Query Frame = 1 Query: 1 GRWNIRRLRDLPETKKLVQSDPFHSMVNLSTFKIIFGMLGMYIAIVFIYSLVYLAIYHFLGCHLELPTLSEAFIFSLETMSTVGYGTSDYLFDNCLIMLPVLTTQACMGLLIDAFLIGILFVRLSRPQTRASTVVFTQNAIIRRVRG 441 GRWNIRRL+ + +KL+ DPFHS +N ST KII ++ +Y+++V ++++VY I LGC+L+L ++ E F+FSLETM+TVGYGT DYLF +C IMLP+L+ QAC+GLLIDAFLIGILF RLSRPQTRA+TVVFT+NA+IRRVRG Sbjct: 129 GRWNIRRLKTQADVQKLIGLDPFHSFLNQSTLKIILLIIALYLSLVLLFAIVYTTISLTLGCNLQLTSIREGFLFSLETMTTVGYGTHDYLFGSCWIMLPMLSLQACIGLLIDAFLIGILFARLSRPQTRANTVVFTKNAVIRRVRG 275
BLAST of mRNA_F-serratus_M_contig998.21262.1 vs. uniprot
Match: A0A836CL18_9STRA (Inward rectifier potassium channel-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CL18_9STRA) HSP 1 Score: 145 bits (366), Expect = 7.920e-36 Identity = 72/147 (48.98%), Postives = 104/147 (70.75%), Query Frame = 1 Query: 1 GRWNIRRLRDLPETKKLVQSDPFHSMVNLSTFKIIFGMLGMYIAIVFIYSLVYLAIYHFLGCHLELPTLSEAFIFSLETMSTVGYGTSDYLFDNCLIMLPVLTTQACMGLLIDAFLIGILFVRLSRPQTRASTVVFTQNAIIRRVRG 441 GRWNI R + L +D FH++++++T+K++ + Y+ +V ++L+YL I HF GC++ + EA+ FSLETM+TVGYGT D F C ++ ++T QAC GLLIDA LIG+LF RL+RPQTRASTVVF+ A++RR+RG Sbjct: 16 GRWNIDRNTKDDHIRTLFNNDRFHTVLHMTTWKVLSYLFFAYLVVVSTFALIYLIISHFDGCNMGIVDYREAYYFSLETMTTVGYGTQDVFFGRCWSVMVIITAQACCGLLIDALLIGVLFARLARPQTRASTVVFSNKAVLRRIRG 162
BLAST of mRNA_F-serratus_M_contig998.21262.1 vs. uniprot
Match: A0A835YU47_9STRA (Inward rectifier potassium channel-domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YU47_9STRA) HSP 1 Score: 144 bits (363), Expect = 2.120e-35 Identity = 73/147 (49.66%), Postives = 105/147 (71.43%), Query Frame = 1 Query: 1 GRWNIRRLRDLPETKKLVQSDPFHSMVNLSTFKIIFGMLGMYIAIVFIYSLVYLAIYHFLGCHLELPTLSEAFIFSLETMSTVGYGTSDYLFDNCLIMLPVLTTQACMGLLIDAFLIGILFVRLSRPQTRASTVVFTQNAIIRRVRG 441 GRWNI R +KL +D FH++++++T+K++ + Y+A+V +++ +YLAI F GC+L + EA+ FSLETM+TVG+GT D F C ++ ++T QAC GLLIDA LIG+LF RL RPQTRASTVVF+ A++RR+RG Sbjct: 41 GRWNIGRNTKDEGMRKLFSNDWFHTVLHMTTWKVLGALFLTYLAVVTVFAALYLAIARFDGCNLGIVDYREAYYFSLETMTTVGFGTQDVFFGRCWSVMVIITAQACSGLLIDALLIGLLFARLGRPQTRASTVVFSDKAVLRRIRG 187
BLAST of mRNA_F-serratus_M_contig998.21262.1 vs. uniprot
Match: A0A835ZBX5_9STRA (IRK_C domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBX5_9STRA) HSP 1 Score: 129 bits (324), Expect = 4.790e-32 Identity = 60/92 (65.22%), Postives = 71/92 (77.17%), Query Frame = 2 Query: 1664 WFAREERKAIDAFLQDRELEVVVILEGTDTATGSTVQARHSYCWENIQWNRTFASCVTQAEDGACVVDFSKFHDTVRAPEDCFDPGFVQSYA 1939 WFA+EER+AI AF++DRELEVVVI+EG DT+TGSTVQ R+SY +N+ W+ CVT+ DG CVVDF KFHD AP DC D GFVQSYA Sbjct: 6 WFAQEERRAIAAFVKDRELEVVVIVEGIDTSTGSTVQCRYSYAVDNMVWDHAIGPCVTKDADGKCVVDFLKFHDVRAAPPDCIDSGFVQSYA 97
BLAST of mRNA_F-serratus_M_contig998.21262.1 vs. uniprot
Match: A0A482S2N8_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S2N8_9ARCH) HSP 1 Score: 112 bits (280), Expect = 5.060e-24 Identity = 62/147 (42.18%), Postives = 94/147 (63.95%), Query Frame = 1 Query: 1 GRWNIRRLRDLPETKKLVQSDPFHSMVNLSTFKIIFGMLGMYIAIVFIYSLVYLAIYHFLGCHLELPTLSEAFIFSLETMSTVGYGTSDYLFDNCLIMLPVLTTQACMGLLIDAFLIGILFVRLSRPQTRASTVVFTQNAIIRRVRG 441 GR +++ + L +D FHS+V+ T +I+ + +Y+A V ++ +Y AI C L+ T AF FSLETM+T+GY T D F NC I+ VLT Q C+ L++D IGI++ RL+RP +RAST++F++NA+IRR+RG Sbjct: 50 GRIYVKKRIQKADWWALYGNDWFHSLVDAPTLRIVALLFTVYVATVAFFATLYYAIRLNYVCELDFETWLGAFDFSLETMATIGYTTKDLSFANCAIVTVVLTLQCCIRLIVDGSTIGIIYCRLARPHSRASTIIFSKNAVIRRIRG 196
BLAST of mRNA_F-serratus_M_contig998.21262.1 vs. uniprot
Match: A0A7S2JZ67_9STRA (Hypothetical protein n=2 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2JZ67_9STRA) HSP 1 Score: 110 bits (275), Expect = 6.140e-22 Identity = 57/119 (47.90%), Postives = 71/119 (59.66%), Query Frame = 2 Query: 446 YFMFQIGELRKHQLLEVRVRCYALRHERLTPMASDPKTKPNGGSEGDGFAPDHGAERQQQVYFQCHSMRLQHPDDELGGNLLLVLPQTVVHRIDAWSPMMPPPRWNSTHGLVHWGLHSD 802 YFMFQ+ ELRKHQL+E VR Y +RHER ++D + + E E YFQ H+MRLQHPDD LGG LL+ LP VVHR+D +SP+MPP +W G +H SD Sbjct: 247 YFMFQLCELRKHQLVEAHVRVYCVRHEREHKESNDVEMR----KESSSXXXVDEEEEPDTCYFQTHAMRLQHPDDALGGFLLMALPNVVVHRLDKFSPLMPPAKWTDASGQIHSWNGSD 361
BLAST of mRNA_F-serratus_M_contig998.21262.1 vs. uniprot
Match: F0WGM8_9STRA (Animal inward rectifier K channel (IRKC) family protein putative n=2 Tax=Albugo TaxID=65356 RepID=F0WGM8_9STRA) HSP 1 Score: 108 bits (270), Expect = 8.910e-22 Identity = 59/150 (39.33%), Postives = 94/150 (62.67%), Query Frame = 1 Query: 1 GRWNIRRLRDLPETKKLVQSDPFHSMVNLSTFKIIFGMLGMYIAIVFIYSLVYLAIYHF-LGCHLELPTLSEAFIFSLETMSTVGYG--TSDYLFDNCLIMLPVLTTQACMGLLIDAFLIGILFVRLSRPQTRASTVVFTQNAIIRRVRG 441 GR+NI+R+ + +K DPFH++VN ST +I+ G+ +Y I+ +++ YL + CH+ L T+ EA+IFSLET+ T+GYG T+D + C M +L+ +A G+ +D+ IG+ F R +R RA+T++FT IIR +RG Sbjct: 37 GRFNIKRIGG--DWRKRYYDDPFHTVVNTSTSRIVIGIFALYTLIILLFAFAYLFVSRVESNCHVGLNTVMEAYIFSLETIMTIGYGAPTNDIFYGGCKTMAILLSLEAYAGIFLDSICIGMFFTRFARANKRANTIMFTNYGIIREIRG 184
BLAST of mRNA_F-serratus_M_contig998.21262.1 vs. uniprot
Match: A0A6A5ABI7_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5ABI7_9STRA) HSP 1 Score: 103 bits (258), Expect = 3.370e-21 Identity = 52/136 (38.24%), Postives = 93/136 (68.38%), Query Frame = 1 Query: 43 KKLVQSDPFHSMVNLSTFKIIFGMLGMYIAIVFIYSLVYLAI-YHFLGCHLELPTLSEAFIFSLETMSTVGYG--TSDYLFDNCLIMLPVLTTQACMGLLIDAFLIGILFVRLSRPQTRASTVVFTQNAIIRRVRG 441 K++ +D +H+++N+ T +I G++ Y+ + F+++ +YL + Y+ C++ + TL+EA+IFS+ET+ T+GYG T D + C M +LT ++ G+ I+A ++G+ F+ SR TRA ++VFT NA+IRR+RG Sbjct: 60 KQIYWNDLYHTVINVKTPTLISGVVVSYVLVTFVFACLYLVVSYNDAKCNVGIKTLTEAYIFSIETIMTIGYGAPTDDIFYGGCGSMALLLTLESFSGIFINALMVGMFFIHFSRASTRAQSIVFTTNAVIRRIRG 195 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig998.21262.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig998.21262.1 >prot_F-serratus_M_contig998.21262.1 ID=prot_F-serratus_M_contig998.21262.1|Name=mRNA_F-serratus_M_contig998.21262.1|organism=Fucus serratus male|type=polypeptide|length=497bp MFQIGELRKHQLLEVRVRCYALRHERLTPMASDPKTKPNGGSEGDGFAPDback to top mRNA from alignment at F-serratus_M_contig998:308765..315759- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig998.21262.1 ID=mRNA_F-serratus_M_contig998.21262.1|Name=mRNA_F-serratus_M_contig998.21262.1|organism=Fucus serratus male|type=mRNA|length=6995bp|location=Sequence derived from alignment at F-serratus_M_contig998:308765..315759- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig998:308765..315759- >mRNA_F-serratus_M_contig998.21262.1 ID=mRNA_F-serratus_M_contig998.21262.1|Name=mRNA_F-serratus_M_contig998.21262.1|organism=Fucus serratus male|type=CDS|length=2982bp|location=Sequence derived from alignment at F-serratus_M_contig998:308765..315759- (Fucus serratus male)back to top |