mRNA_F-serratus_M_contig998.21262.1 (mRNA) Fucus serratus male
Overview
Homology
BLAST of mRNA_F-serratus_M_contig998.21262.1 vs. uniprot
Match: A9UNU4_MONBE (Uncharacterized protein n=1 Tax=Monosiga brevicollis TaxID=81824 RepID=A9UNU4_MONBE) HSP 1 Score: 106 bits (264), Expect = 1.410e-20 Identity = 62/148 (41.89%), Postives = 97/148 (65.54%), Query Frame = 1 Query: 1 GRWNIRRLRDLPETKKLVQSDPFHSMVNLSTFKIIFGMLGMYIAIVFIYSLVYLAIYHFLG--CHLELPTLSEAFIFSLETMSTVGYGTSDYLFDNCLIMLPVLTTQACMGLLIDAFLIGILFVRLSRPQTRASTVVFTQNAIIRRVR 438 GR+ +RR L +L +SD FH +VNL+T+KI+ M+ +Y+ + +VY ++H+ C LEL T +AF+ SLE+++T+GYG D F++CL V+ +QA +GL +D+ LIG+LF R SR TR+ +V+F+ A+IR VR Sbjct: 128 GRFAVRRSMPL-HAFRLYRSDWFHFLVNLATWKIVVIMMFLYVVV----CVVYAGLFHWSSSACGLELKTFRQAFMLSLESLTTIGYGVPDPYFNDCLAGPFVVLSQAIVGLFVDSVLIGVLFTRFSRGTTRSRSVIFSNKAVIRAVR 270
BLAST of mRNA_F-serratus_M_contig998.21262.1 vs. uniprot
Match: A0A7S2UYT9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UYT9_9STRA) HSP 1 Score: 101 bits (251), Expect = 1.820e-20 Identity = 55/148 (37.16%), Postives = 90/148 (60.81%), Query Frame = 1 Query: 1 GRWNIRRLRDLPETKKLVQSDPFHSMVNLSTFKIIFGMLGMYIAIVFIYSLVYLAI-YHFLGCHLELPTLSEAFIFSLETMSTVGYGTSDYLFDNCLIMLPVLTTQACMGLLIDAFLIGILFVRLSRPQTRASTVVFTQNAIIRRVRG 441 G+WN+ R DLP ++ +D FH++VN T K++ +L Y+ I + VY AI +L++ L E ++FSLET++T+GYGT D F + ++ V T Q +GL++D G++F R+SR TRA +++F+ A++ RV G Sbjct: 59 GKWNLVRTGDLPIRARVYGADWFHTLVNSGTKKLLGCLLLAYVVIALFFGGVYWAISVSDPSTNLDIQNLVEGYMFSLETLTTIGYGTHDIFFGGNMYVVVVFTVQVLVGLVLDCVTFGVIFSRISRANTRAFSIIFSDKAVVTRVNG 206
BLAST of mRNA_F-serratus_M_contig998.21262.1 vs. uniprot
Match: H3GJH8_PHYRM (Uncharacterized protein n=18 Tax=Phytophthora TaxID=4783 RepID=H3GJH8_PHYRM) HSP 1 Score: 104 bits (260), Expect = 1.950e-20 Identity = 56/150 (37.33%), Postives = 96/150 (64.00%), Query Frame = 1 Query: 1 GRWNIRRLRDLPETKKLVQSDPFHSMVNLSTFKIIFGMLGMYIAIVFIYSLVYLAI-YHFLGCHLELPTLSEAFIFSLETMSTVGYG--TSDYLFDNCLIMLPVLTTQACMGLLIDAFLIGILFVRLSRPQTRASTVVFTQNAIIRRVRG 441 GR+NI R + +K+ DPFH+++N T +II+G+ Y I+F ++L YL + CH+ L ++ +A++FSLET+ T+GYG T D + C + +LT ++ G+++D+ IGI + R SR RA+T++F+ +A+IR++RG Sbjct: 42 GRFNIYRKGG--DWRKIYWDDPFHTVINTRTSRIIWGVFIAYFFIIFFFALAYLDVSVRHPTCHVGLSSIMDAYVFSLETIMTIGYGAPTDDIFYGGCTSIATLLTLESFAGIILDSVCIGIFYARFSRANQRANTIMFSNSAVIRKIRG 189
BLAST of mRNA_F-serratus_M_contig998.21262.1 vs. uniprot
Match: W4FQ56_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FQ56_9STRA) HSP 1 Score: 103 bits (258), Expect = 4.430e-20 Identity = 52/136 (38.24%), Postives = 93/136 (68.38%), Query Frame = 1 Query: 43 KKLVQSDPFHSMVNLSTFKIIFGMLGMYIAIVFIYSLVYLAI-YHFLGCHLELPTLSEAFIFSLETMSTVGYG--TSDYLFDNCLIMLPVLTTQACMGLLIDAFLIGILFVRLSRPQTRASTVVFTQNAIIRRVRG 441 K++ +D +H+++N+ T +I G++ Y+ + F+++ +YL + Y+ C++ + TL+EA+IFS+ET+ T+GYG T D + C M +LT ++ G+ I+A ++G+ F+ SR TRA ++VFT NA+IRR+RG Sbjct: 79 KQIYWNDLYHTVINVKTPTLISGVVVSYVLVTFVFACLYLVVSYNDAKCNVGIKTLTEAYIFSIETIMTIGYGAPTDDIFYGGCGSMALLLTLESFSGIFINALMVGMFFIHFSRASTRAQSIVFTTNAVIRRIRG 214
BLAST of mRNA_F-serratus_M_contig998.21262.1 vs. uniprot
Match: A0A3L6V6C4_9STRA (IRK domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3L6V6C4_9STRA) HSP 1 Score: 99.8 bits (247), Expect = 6.180e-20 Identity = 52/149 (34.90%), Postives = 94/149 (63.09%), Query Frame = 1 Query: 1 GRWNIRRLRDLPETKKLVQSDPFHSMVNLSTFKIIFGMLGMYIAIVFIYSLVYLAIYHFLGCHLELPTLSEAFIFSLETMSTVGYGT--SDYLFDNCLIMLPVLTTQACMGLLIDAFLIGILFVRLSRPQTRASTVVFTQNAIIRRVRG 441 G WNIRRLR K+ + S PFH++VN+S +K++ G+ +Y+ ++ ++ L YL+I C+L + T + FIFS+ + T+G+G +D F++C + ++T Q +G+ +DA GI + R +R Q+RA+T+ + A ++++RG Sbjct: 73 GTWNIRRLRASDAYKRYL-SAPFHTLVNMSVYKVVIGLSLVYLTVIAVFGLFYLSIDS--SCNLAIATFPQGFIFSVSVLFTIGFGVGGNDVFFNSCGSAITLITAQTIVGVFLDAMAFGIFYQRFARGQSRANTIRVSAFACVQKIRG 218
BLAST of mRNA_F-serratus_M_contig998.21262.1 vs. uniprot
Match: A0A3R6XRZ4_9STRA (IRK domain-containing protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R6XRZ4_9STRA) HSP 1 Score: 100 bits (249), Expect = 6.730e-20 Identity = 52/149 (34.90%), Postives = 95/149 (63.76%), Query Frame = 1 Query: 1 GRWNIRRLRDLPETKKLVQSDPFHSMVNLSTFKIIFGMLGMYIAIVFIYSLVYLAIYHFLGCHLELPTLSEAFIFSLETMSTVGYGT--SDYLFDNCLIMLPVLTTQACMGLLIDAFLIGILFVRLSRPQTRASTVVFTQNAIIRRVRG 441 G WNIRRLR K+ + S PFH++VN+S +K++ G+ +Y+ ++ ++ L+YL+I C+L + T + FIFS+ + T+G+G +D F++C + ++T Q +G+ +DA GI + R +R Q+RA+T+ + A ++++RG Sbjct: 63 GTWNIRRLRASDAYKRYL-SAPFHTLVNMSVYKVVIGLSLVYLTVIAVFGLLYLSIDS--SCNLAIATFPQGFIFSVSVLFTIGFGVGGNDVFFNSCGSAITLITAQTIVGVFLDAMAFGIFYQRFARGQSRANTIRVSAFACVQKIRG 208
BLAST of mRNA_F-serratus_M_contig998.21262.1 vs. uniprot
Match: A0A421GNN7_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A421GNN7_9STRA) HSP 1 Score: 102 bits (255), Expect = 8.440e-20 Identity = 56/150 (37.33%), Postives = 96/150 (64.00%), Query Frame = 1 Query: 1 GRWNIRRLRDLPETKKLVQSDPFHSMVNLSTFKIIFGMLGMYIAIVFIYSLVYLAI-YHFLGCHLELPTLSEAFIFSLETMSTVGYG--TSDYLFDNCLIMLPVLTTQACMGLLIDAFLIGILFVRLSRPQTRASTVVFTQNAIIRRVRG 441 G++NI R + +K+ DPFH+++N T +II+G+ Y I+ ++L YL + CH+ L ++ EA+IFSLET+ T+GYG T+D + C + +LT ++ G+++D+ IGI + R SR RA+T++F+ +A+IR++RG Sbjct: 40 GQFNIYRKGG--DWRKIYWDDPFHTVINTRTSRIIWGVFIAYFFIILFFALAYLDVSVRHPTCHVGLSSIIEAYIFSLETIMTIGYGAPTNDIFYGGCTTIATLLTLESFAGIILDSVCIGIFYARFSRANQRANTIMFSNSAVIRKIRG 187
BLAST of mRNA_F-serratus_M_contig998.21262.1 vs. uniprot
Match: A0A833SV26_PHYIN (Inward rectifier potassium channel transmembrane domain-containing protein n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833SV26_PHYIN) HSP 1 Score: 101 bits (251), Expect = 9.180e-20 Identity = 54/150 (36.00%), Postives = 95/150 (63.33%), Query Frame = 1 Query: 1 GRWNIRRLRDLPETKKLVQSDPFHSMVNLSTFKIIFGMLGMYIAIVFIYSLVYLAI-YHFLGCHLELPTLSEAFIFSLETMSTVGYG--TSDYLFDNCLIMLPVLTTQACMGLLIDAFLIGILFVRLSRPQTRASTVVFTQNAIIRRVRG 441 GR+N+ R + +K+ DPFH+++N T +II+G+ Y I+ +++ YL + CH+ L ++ +A+IFSLET+ T+GYG T D + C + +LT ++ G+++D+ IGI + R SR RA+T++F+ +A+IR++RG Sbjct: 42 GRFNVYRKGG--DWRKIYWDDPFHTVINTRTSRIIWGVFIAYFFIILFFAVAYLDVSVRHPTCHVGLSSIMDAYIFSLETIMTIGYGAPTDDIFYGGCTSIATLLTLESFSGIILDSVCIGIFYARFSRANQRANTIMFSNSAVIRKIRG 189
BLAST of mRNA_F-serratus_M_contig998.21262.1 vs. uniprot
Match: A0A6G0XB18_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XB18_9STRA) HSP 1 Score: 102 bits (255), Expect = 1.040e-19 Identity = 53/149 (35.57%), Postives = 96/149 (64.43%), Query Frame = 1 Query: 1 GRWNIRRLRDLPETKKLVQSDPFHSMVNLSTFKIIFGMLGMYIAIVFIYSLVYLAIYHFLGCHLELPTLSEAFIFSLETMSTVGYGT--SDYLFDNCLIMLPVLTTQACMGLLIDAFLIGILFVRLSRPQTRASTVVFTQNAIIRRVRG 441 G WNIRRLR P ++ S PFH++VN+S +K++F + +Y+ ++ IY+L+YL + C++ + T ++FIFS+ + T+G+G +D F++C + +T+Q +G+ +DA GI + R +R Q+RA+T+ + A I+++RG Sbjct: 51 GTWNIRRLR-APHAWRVYLSAPFHTLVNMSLYKVLFCLTSVYLILIIIYALLYLTVDP--SCNMAINTFPQSFIFSVSVLFTIGFGVGGNDIYFNSCGSAIFFITSQTIIGVFVDAIAFGIFYARFARGQSRAATIYVSAVACIQKIRG 196
BLAST of mRNA_F-serratus_M_contig998.21262.1 vs. uniprot
Match: A0A397ASX3_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397ASX3_9STRA) HSP 1 Score: 100 bits (249), Expect = 1.300e-19 Identity = 52/149 (34.90%), Postives = 95/149 (63.76%), Query Frame = 1 Query: 1 GRWNIRRLRDLPETKKLVQSDPFHSMVNLSTFKIIFGMLGMYIAIVFIYSLVYLAIYHFLGCHLELPTLSEAFIFSLETMSTVGYGT--SDYLFDNCLIMLPVLTTQACMGLLIDAFLIGILFVRLSRPQTRASTVVFTQNAIIRRVRG 441 G WNIRRLR K+ + S PFH++VN+S +K++ G+ +Y+ ++ ++ L+YL+I C+L + T + FIFS+ + T+G+G +D F++C + ++T Q +G+ +DA GI + R +R Q+RA+T+ + A ++++RG Sbjct: 55 GTWNIRRLRASDAYKRYL-SAPFHTLVNMSVYKVVIGLSLVYLTVIAVFGLLYLSIDS--SCNLAIATFPQGFIFSVSVLFTIGFGVGGNDVFFNSCGSAITLITAQTIVGVFLDAMAFGIFYQRFARGQSRANTIRVSAFACVQKIRG 200 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig998.21262.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig998.21262.1 >prot_F-serratus_M_contig998.21262.1 ID=prot_F-serratus_M_contig998.21262.1|Name=mRNA_F-serratus_M_contig998.21262.1|organism=Fucus serratus male|type=polypeptide|length=497bp MFQIGELRKHQLLEVRVRCYALRHERLTPMASDPKTKPNGGSEGDGFAPDback to top mRNA from alignment at F-serratus_M_contig998:308765..315759- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig998.21262.1 ID=mRNA_F-serratus_M_contig998.21262.1|Name=mRNA_F-serratus_M_contig998.21262.1|organism=Fucus serratus male|type=mRNA|length=6995bp|location=Sequence derived from alignment at F-serratus_M_contig998:308765..315759- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig998:308765..315759- >mRNA_F-serratus_M_contig998.21262.1 ID=mRNA_F-serratus_M_contig998.21262.1|Name=mRNA_F-serratus_M_contig998.21262.1|organism=Fucus serratus male|type=CDS|length=2982bp|location=Sequence derived from alignment at F-serratus_M_contig998:308765..315759- (Fucus serratus male)back to top |