mRNA_F-serratus_M_contig996.21247.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig996.21247.1
Unique NamemRNA_F-serratus_M_contig996.21247.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
[Close]
BLAST of mRNA_F-serratus_M_contig996.21247.1 vs. uniprot
Match: A0A367L189_9HYPO (3'-5' exonuclease domain-containing protein n=1 Tax=Ophiocordyceps polyrhachis-furcata BCC 54312 TaxID=1330021 RepID=A0A367L189_9HYPO)

HSP 1 Score: 70.1 bits (170), Expect = 7.180e-9
Identity = 60/187 (32.09%), Postives = 88/187 (47.06%), Query Frame = 1 
Query:  352 VLGIDIEWSV---RPSEPRRQVSLLQLSARDGYTVLFHLKHDERRPGIMPKALKELLINDTVQLAGVSVRGDLKHILNSYGVQGTNPVDVGQLAGTHLGVKIGARSLQALTATLLRRR--------LAKG-TVRTSNWEMDLSKEQVKYAGLDSYADVLLFCHIWAR---MDPIFTE*RPDVLSLPV 867
            +LG+D+EW     R + PR+ VS++QL A +    +FH+        + P   + L+ +  V+  GV++ GD   +    GV G    ++  L      V  G   L   T T L  +        L KG TVRTSNW M LS  Q++YA  D+YA   LF  + A+   +DP      P  L LP+
Sbjct:  200 ILGLDLEWCTKVFRDASPRKNVSVIQL-ATESRIGIFHVAVFPGDDLVAP-TFRALIEDAAVKKVGVNILGDCTRLKRHLGVNGRGIYELSHLHKLVKYVAAGTPKLITRTVTPLSVQVEEHMHLPLYKGDTVRTSNWLMPLSMNQIEYAASDAYAGAQLFYILDAKRRKLDPTPPMPHPAELGLPI 384
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BLAST of mRNA_F-serratus_M_contig996.21247.1 vs. uniprot
Match: A0A1U7LXB9_NEOID (Werner syndrome ATP-dependent helicase n=1 Tax=Neolecta irregularis (strain DAH-3) TaxID=1198029 RepID=A0A1U7LXB9_NEOID)

HSP 1 Score: 69.3 bits (168), Expect = 8.570e-9
Identity = 53/157 (33.76%), Postives = 80/157 (50.96%), Query Frame = 1 
Query:  352 VLGIDIEWSV---RPSEPRRQVSLLQLSARDGYTVLFHLKHDERRPGIMPKALKELLINDTVQLAGVSVRGDLKHILNSYGVQGTNPVDVGQLAGT---HLGVKIGARSLQA--LTATLLRRRLAKGTVRTSNWEMDLSKEQVKYAGLDSYADVLLF 798
            VLG D+EW     +   P  +VSL+QL   D   +L        +    P AL E++ N  +   GV++ GD K +L++Y V     +++  LA +      V  GAR++    L    L + L+KG VR SNW  +LS +Q+ YA  D+YA + LF
Sbjct:  207 VLGFDMEWPPVFRKSKTPNPKVSLIQLC--DPNVILLI---QVGKMTAFPPALAEIIGNPRILKCGVAISGDGKRLLDAYNVTCRGLLELSNLAVSVDPERWVSNGARTIAMTKLCEIYLGKPLSKGPVRISNWNQNLSSDQIHYAATDTYAGLRLF 358
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BLAST of mRNA_F-serratus_M_contig996.21247.1 vs. uniprot
Match: A0A369HFC6_9HYPO (3'-5' exonuclease domain-containing protein n=1 Tax=Ophiocordyceps camponoti-saundersi (nom. inval.) TaxID=2039874 RepID=A0A369HFC6_9HYPO)

HSP 1 Score: 69.3 bits (168), Expect = 1.270e-8
Identity = 58/186 (31.18%), Postives = 85/186 (45.70%), Query Frame = 1 
Query:  352 VLGIDIEWSV---RPSEPRRQVSLLQLSARDGYTVLFHLKHDERRPGIMPKALKELLINDTVQLAGVSVRGDLKHILNSYGVQGTNPVDVGQL--------AGTHLGVKIGARSLQALTATLLRRRLAKGTVRTSNWEMDLSKEQVKYAGLDSYADVLLFCHIWAR---MDPIFTE*RPDVLSLPV 867
            +LG+D+EW     R + PR+ VS++QL+      V FH+        + P   + L+ N  V+  GV++ GD   +    GV+     ++  L        AGT   +      L       L   L KG VRT +W M LS EQ+ YA  D+YA   LF  + A+   +DPI     P  L LP+
Sbjct:  207 ILGLDLEWCTKVYRDASPRKNVSVIQLATPSNIGV-FHVAVFPGNDLVSP-TFQALMGNPDVKKVGVNILGDCTRLKRHLGVKVRGIFELSHLHKLVKYVAAGTPQLITRSVTPLAVQVEEHLHLPLYKGDVRTGDWLMPLSMEQIDYAASDAYAGPQLFHVLDAKRRKLDPIPPMPHPAELGLPI 390
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BLAST of mRNA_F-serratus_M_contig996.21247.1 vs. uniprot
Match: A0A0G4IXN0_PLABS (SANT domain-containing protein n=2 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4IXN0_PLABS)

HSP 1 Score: 68.6 bits (166), Expect = 3.210e-8
Identity = 115/494 (23.28%), Postives = 191/494 (38.66%), Query Frame = 1 
Query:  223 SLPSLEFPAHVSPILVRVTSENCEHCTRICFGLLKRARESTPAVLGIDIEWSVRPSE-------PRRQVSLLQLSARDGYTVLFHLKHDERRPGIMPKALKELLINDTVQLAGVSVRGDLKHILNSYGVQGTNPVDVGQLAGTHLGVKIGARSLQALTATLLRRRLAKGT-VRTS-NWEMDLSKEQVKYAGLDSYADVLLFCHIWARMDPIFTE*RPDVLSLPVNTP---LRL-YTSTNSRCVAEGTLVDYPQGSTWGSTGLTIGRVTGGATRMVIKLTARHIPGAFTLHPREDGGQVQALDELELGDLVLWNAINSRLPADPGPVSSLGVVGAGDV---AGVTGTSSTSTLEPGG*VEGSASALGTTGVGGVTSAAGATYGPFCAALRDAFTIPDPEAMDRVRRVWKQRYPSWSNQEIAADMRAKL--SSHLLKHVPRIVPRPEILLPRYDNVIETFKVVRDGATGDTLFTDRMHKAAALLRVHIDKGCLSDP 1650
            S+PS  +P     +L    SE  +    +   LL  A ++   V+G D EW V  S         R +V  +Q++  +G   L  +         +P+AL+ LL +  +   G  ++ D   +   +GV   N VDV  L      +     SL+ L + +    L K   +R S +W   LS  Q++YA  D++A + L+ + ++R     T        +PV+     LR+     NS+ VA GT+V+    S        +         +++++     PG   +  R      Q + EL +   V   +I       P    S  VV   D+          +T+  +P                             F AA+RDA  + DPE    VRR  ++        ++  D  A +  S      + R   RP  +      V++ ++  +D  T + L T+   K    +RVH+ KGCLSDP
Sbjct:  244 SVPSFSWPPSDGRVL-STPSEINDVLDAVYRTLLSEAPDNR--VIGYDQEWDVVMSRVGGRFVSSRSRVRTIQMAMTNGEMYLVQVSDGMTN---LPRALRTLLSDARIAKVGRQIQHDAAKLFKDFGVPLNNCVDVAVLGKRRGKLSTSKLSLERLMSLVFHVALEKPAHIRVSEHWSGPLSPAQIRYANRDAFAGLALYQY-FSRFQDCSTP-------IPVSDAAPGLRVDIVIGNSKRVASGTIVENSGTSRDARASQHV---------LLVEVDELSAPG-LRIATRNGLPAFQTIKELPVRLPVRLESIRRARECLPLESQSDDVVVLKDIFHWLNDLPVKATNAYQP----------------------------AFLAAMRDAILVVDPEDKAMVRRKLEE------TGQLPDDFEAFVHNSRWARARIKRATRRPVEMDEAVQAVVDAYRSAKDPMTNEPLLTEAGLKKIEAMRVHVRKGCLSDP 679
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BLAST of mRNA_F-serratus_M_contig996.21247.1 vs. uniprot
Match: A0A3P3YH56_PLABS (SANT domain-containing protein n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A3P3YH56_PLABS)

HSP 1 Score: 68.6 bits (166), Expect = 3.670e-8
Identity = 115/494 (23.28%), Postives = 191/494 (38.66%), Query Frame = 1 
Query:  223 SLPSLEFPAHVSPILVRVTSENCEHCTRICFGLLKRARESTPAVLGIDIEWSVRPSE-------PRRQVSLLQLSARDGYTVLFHLKHDERRPGIMPKALKELLINDTVQLAGVSVRGDLKHILNSYGVQGTNPVDVGQLAGTHLGVKIGARSLQALTATLLRRRLAKGT-VRTS-NWEMDLSKEQVKYAGLDSYADVLLFCHIWARMDPIFTE*RPDVLSLPVNTP---LRL-YTSTNSRCVAEGTLVDYPQGSTWGSTGLTIGRVTGGATRMVIKLTARHIPGAFTLHPREDGGQVQALDELELGDLVLWNAINSRLPADPGPVSSLGVVGAGDV---AGVTGTSSTSTLEPGG*VEGSASALGTTGVGGVTSAAGATYGPFCAALRDAFTIPDPEAMDRVRRVWKQRYPSWSNQEIAADMRAKL--SSHLLKHVPRIVPRPEILLPRYDNVIETFKVVRDGATGDTLFTDRMHKAAALLRVHIDKGCLSDP 1650
            S+PS  +P     +L    SE  +    +   LL  A ++   V+G D EW V  S         R +V  +Q++  +G   L  +         +P+AL+ LL +  +   G  ++ D   +   +GV   N VDV  L      +     SL+ L + +    L K   +R S +W   LS  Q++YA  D++A + L+ + ++R     T        +PV+     LR+     NS+ VA GT+V+    S        +         +++++     PG   +  R      Q + EL +   V   +I       P    S  VV   D+          +T+  +P                             F AA+RDA  + DPE    VRR  ++        ++  D  A +  S      + R   RP  +      V++ ++  +D  T + L T+   K    +RVH+ KGCLSDP
Sbjct:  587 SVPSFSWPPSDGRVL-STPSEINDVLDAVYRTLLSEAPDNR--VIGYDQEWDVVMSRVGGRFVSSRSRVRTIQMAMTNGEMYLVQVSDGMTN---LPRALRTLLSDARIAKVGRQIQHDAAKLFKDFGVPLNNCVDVAVLGKRRGKLSTSKLSLERLMSLVFHVALEKPAHIRVSEHWSGPLSPAQIRYANRDAFAGLALYQY-FSRFQDCSTP-------IPVSDAAPGLRVDIVIGNSKRVASGTIVENSGTSRDARASQHV---------LLVEVDELSAPG-LRIATRNGLPAFQTIKELPVRLPVRLESIRRARECLPLESQSDDVVVLKDIFHWLNDLPVKATNAYQP----------------------------AFLAAMRDAILVVDPEDKAMVRRKLEE------TGQLPDDFEAFVHNSRWARARIKRATRRPVEMDEAVQAVVDAYRSAKDPMTNEPLLTEAGLKKIEAMRVHVRKGCLSDP 1022
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BLAST of mRNA_F-serratus_M_contig996.21247.1 vs. uniprot
Match: A0A8H5E0F0_9HYPO (3'-5' exonuclease domain-containing protein n=4 Tax=Fusarium fujikuroi species complex TaxID=171627 RepID=A0A8H5E0F0_9HYPO)

HSP 1 Score: 67.4 bits (163), Expect = 4.580e-8
Identity = 62/199 (31.16%), Postives = 94/199 (47.24%), Query Frame = 1 
Query:  340 STPAVLGIDIEWSVRP----SEPRRQVSLLQLSARDGYTVLFHLKHDERRPGIMPKALKELLINDTVQLAGVSVRGDLKHILNSYGVQGTNPVDVGQL--------AGTHLGVKIGARSLQALTATLLRRRLAKGT-VRTSNWEMDLSKEQVKYAGLDSYADVLLFCHI-WARMDPIFTE*RPDVLSLPVNTPLRLYTS 894
            S   V+G D+EW V      S PRR VSL+Q+ A      LFH+    R   + P   K ++ +++V   GV+++GD   + N+ G+     +++  L        AG    +     SL   T  +L   L KG  VR+SNW M LS +QV Y+  D+Y  + L+  +   RM    T  RP  +    N P+R  T+
Sbjct:  181 SDEKVIGFDLEWLVARGPANSNPRRNVSLIQI-ASPSRVGLFHVALFPRDDFVAP-TFKRIMEDESVTKVGVAIKGDCTRLKNNLGINSRGILELSHLYKLVKYSKAGELDRINKVMVSLAVQTKEMLGLPLFKGDDVRSSNWMMRLSADQVTYSASDAYVGLQLYYVLEQERMKLQPTPPRPAFVEQ--NLPIRFLTA 375
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BLAST of mRNA_F-serratus_M_contig996.21247.1 vs. uniprot
Match: A0A4Y9ZZU0_9AGAM (3'-5' exonuclease domain-containing protein n=1 Tax=Hericium alpestre TaxID=135208 RepID=A0A4Y9ZZU0_9AGAM)

HSP 1 Score: 67.4 bits (163), Expect = 4.860e-8
Identity = 53/159 (33.33%), Postives = 82/159 (51.57%), Query Frame = 1 
Query:  355 LGIDIEWSV------RPSEPRRQVSLLQLSARDGYTVLFHLKHDERRPGIMPKALKELLINDTVQLAGVSVRGDLKHILNSYGVQGTNPVDVGQLA--GTHLGVKIGARSLQALTATL---LRRRLAKGTVRTSNWEMDLSKEQVKYAGLDSYADVLLF 798
            +G D+EW V      R +E  R+ +L+QL   D   +L       +R    P+ LKEL+ +  V   G ++R D   +   +G+   N V++G LA        K  +RS+ +L   +   LRR L KG VRTSNWE  L++EQ++YA  D Y  + ++
Sbjct:  196 VGFDLEWRVFIRRGARMTE--RRTALVQLC--DSTMILLLQVSSMQR---FPQKLKELIESPHVAKMGANIRNDGMKLYRDFGILARNLVELGGLARQADERFQKAYSRSIVSLAKVIAFYLRRSLDKGPVRTSNWEAQLTREQMEYAANDVYCSLTVY 347
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BLAST of mRNA_F-serratus_M_contig996.21247.1 vs. uniprot
Match: A0A166BV87_EXIGL (Ribonuclease H-like protein n=1 Tax=Exidia glandulosa HHB12029 TaxID=1314781 RepID=A0A166BV87_EXIGL)

HSP 1 Score: 66.6 bits (161), Expect = 7.420e-8
Identity = 66/224 (29.46%), Postives = 103/224 (45.98%), Query Frame = 1 
Query:  157 GPASEAVPDFTSSTYFGGEAERSLPSLEFPAHVSPILVRVTSENCEHCTRICFGLLKRARESTPAVLGIDIEWSVRP-SEPRRQVSLLQLSARDGYTVLFHLKHDERRPGIMPKALKELLINDTVQLAGVSVRGDLKHILNSYGVQGTNPVDVGQLAGTHLGV---------KIGARSLQALTATLLRRRLAKGTVRTSNWEMDLSKEQVKYAGLDSYADVLLF 798
            GPAS A    T S Y   E +R  P    P  +S +    T E+            +  +   P  +  D+EW   P ++   +++L+Q++ R    ++   + DE     +P  L  LL + T+   GV++RGD + +   YGV    PV + +L+   L V         K    SLQ LTA  L   LAK   + S+WE +L+ EQ+ YA  D+ A +L+F
Sbjct:   44 GPASGAGVQRTGSRYTLEELQRLAP-FRVPTAISVVQCH-THEDAN----------RELKHLEPGYVSFDMEWHWNPQTKITGRIALVQVADRKRAVLVRTTRMDE-----LPPVLVSLLQDPTLLKVGVNIRGDGRKVFEDYGVV---PVGLFELSRAALLVDVPFWSDRDKSRLISLQHLTAKYLNAYLAKDE-QQSDWEQELTPEQLSYAAADAVAGMLIF 246
[Close]
BLAST of mRNA_F-serratus_M_contig996.21247.1 vs. uniprot
Match: W7M8M6_GIBM7 (3'-5' exonuclease domain-containing protein n=42 Tax=Fusarium TaxID=5506 RepID=W7M8M6_GIBM7)

HSP 1 Score: 66.2 bits (160), Expect = 1.250e-7
Identity = 53/166 (31.93%), Postives = 81/166 (48.80%), Query Frame = 1 
Query:  340 STPAVLGIDIEWSVRP----SEPRRQVSLLQLSARDGYTVLFHLKHDERRPGIMPKALKELLINDTVQLAGVSVRGDLKHILNSYGVQGTNPVDVGQL--------AGTHLGVKIGARSLQALTATLLRRRLAKGT-VRTSNWEMDLSKEQVKYAGLDSYADVLLF 798
            S   V+G D+EW V      S PRR VSL+Q+ A      LFH+    R   + P   K ++ +++V   GV+++GD   + N+ G+     +++  L        AG    +     SL   T  +L   L KG  VR+SNW M LS +QV Y+  D+Y  + L+
Sbjct:  235 SDEKVIGFDLEWLVARGPANSNPRRNVSLIQI-ASPSRIGLFHVALFPRDDFVAP-TFKRIMEDESVTKVGVAIKGDCTRLKNNLGINSKGILELSHLYKLVKYSKAGELDRINKVMVSLAVQTQEMLGLPLFKGDDVRSSNWMMRLSADQVAYSASDAYVGLQLY 398
[Close]
BLAST of mRNA_F-serratus_M_contig996.21247.1 vs. uniprot
Match: I1RRT1_GIBZE (3'-5' exonuclease domain-containing protein n=6 Tax=Fusarium sambucinum species complex TaxID=569360 RepID=I1RRT1_GIBZE)

HSP 1 Score: 65.9 bits (159), Expect = 1.530e-7
Identity = 47/160 (29.38%), Postives = 83/160 (51.88%), Query Frame = 1 
Query:  352 VLGIDIEWSVRP--SEPRRQVSLLQLSARDGYTVLFHLKHDERRPGIMPKALKELLINDTVQLAGVSVRGDLKHILNSYGVQGTNPVDVGQLAGTHLGVKIGAR--------SLQALTATLLRRRLAKGT-VRTSNWEMDLSKEQVKYAGLDSYADVLLF 798
            V+G D+EW +R   ++PR  VSL+Q+ A      LFH+    +   + P   K+++ +++V   GV ++GD   + N+ G++    +++  L       K G          +L A T  +L   L KG  VR+SNW + LS++Q+ Y+  D+Y  + L+
Sbjct:  187 VIGFDLEWLIRHRNTDPRVNVSLIQI-ASPSRVALFHVALYPKDDFVAP-TFKKIMEDESVTKVGVCIKGDCTRLKNNLGIESRGVLELSHLFKLVKYSKSGELKRINKIMVNLAAQTQEVLGLPLFKGNDVRSSNWMLPLSEQQISYSASDAYVGLQLY 344
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig996.21247.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A367L189_9HYPO7.180e-932.093'-5' exonuclease domain-containing protein n=1 Ta... [more]
A0A1U7LXB9_NEOID8.570e-933.76Werner syndrome ATP-dependent helicase n=1 Tax=Neo... [more]
A0A369HFC6_9HYPO1.270e-831.183'-5' exonuclease domain-containing protein n=1 Ta... [more]
A0A0G4IXN0_PLABS3.210e-823.28SANT domain-containing protein n=2 Tax=Plasmodioph... [more]
A0A3P3YH56_PLABS3.670e-823.28SANT domain-containing protein n=1 Tax=Plasmodioph... [more]
A0A8H5E0F0_9HYPO4.580e-831.163'-5' exonuclease domain-containing protein n=4 Ta... [more]
A0A4Y9ZZU0_9AGAM4.860e-833.333'-5' exonuclease domain-containing protein n=1 Ta... [more]
A0A166BV87_EXIGL7.420e-829.46Ribonuclease H-like protein n=1 Tax=Exidia glandul... [more]
W7M8M6_GIBM71.250e-731.933'-5' exonuclease domain-containing protein n=42 T... [more]
I1RRT1_GIBZE1.530e-729.383'-5' exonuclease domain-containing protein n=6 Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig996contigF-serratus_M_contig996:196200..199356 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score297.7
Seed ortholog evalue3.9e-78
Seed eggNOG ortholog2880.D7G0J2
Preferred nameWRN
KEGG koko:K10900,ko:K20777
Hectar predicted targeting categoryother localisation
GOsGO:0000018,GO:0000019,GO:0000217,GO:0000287,GO:0000400,GO:0000403,GO:0000405,GO:0000723,GO:0000724,GO:0000725,GO:0000731,GO:0000738,GO:0000781,GO:0001302,GO:0001325,GO:0003674,GO:0003676,GO:0003677,GO:0003678,GO:0003682,GO:0003684,GO:0003824,GO:0004003,GO:0004386,GO:0004518,GO:0004527,GO:0004529,GO:0004536,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005657,GO:0005694,GO:0005730,GO:0005737,GO:0005813,GO:0005815,GO:0005856,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006275,GO:0006281,GO:0006284,GO:0006302,GO:0006308,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006979,GO:0006996,GO:0007154,GO:0007275,GO:0007568,GO:0007569,GO:0008026,GO:0008094,GO:0008104,GO:0008150,GO:0008152,GO:0008156,GO:0008296,GO:0008297,GO:0008309,GO:0008310,GO:0008311,GO:0008408,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009267,GO:0009314,GO:0009378,GO:0009411,GO:0009416,GO:0009605,GO:0009628,GO:0009889,GO:0009890,GO:0009892,GO:0009893,GO:0009987,GO:0009991,GO:0010212,GO:0010225,GO:0010259,GO:0010332,GO:0010556,GO:0010558,GO:0010604,GO:0010605,GO:0010941,GO:0015630,GO:0016043,GO:0016462,GO:0016604,GO:0016607,GO:0016787,GO:0016788,GO:0016796,GO:0016817,GO:0016818,GO:0016887,GO:0016895,GO:0017111,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0019439,GO:0022607,GO:0030145,GO:0031297,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031667,GO:0031668,GO:0031669,GO:0031974,GO:0031981,GO:0032200,GO:0032356,GO:0032357,GO:0032392,GO:0032501,GO:0032502,GO:0032508,GO:0033036,GO:0033365,GO:0033554,GO:0034504,GO:0034613,GO:0034641,GO:0034645,GO:0034654,GO:0034655,GO:0040008,GO:0040009,GO:0042162,GO:0042592,GO:0042594,GO:0042623,GO:0042802,GO:0042803,GO:0042981,GO:0042995,GO:0043005,GO:0043067,GO:0043085,GO:0043138,GO:0043140,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043565,GO:0044085,GO:0044093,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0044271,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044430,GO:0044446,GO:0044451,GO:0044464,GO:0044806,GO:0044877,GO:0045005,GO:0045910,GO:0045911,GO:0045934,GO:0045935,GO:0045950,GO:0046483,GO:0046700,GO:0046872,GO:0046914,GO:0046983,GO:0048478,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048856,GO:0048869,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051052,GO:0051053,GO:0051054,GO:0051171,GO:0051172,GO:0051173,GO:0051179,GO:0051276,GO:0051336,GO:0051345,GO:0051641,GO:0051716,GO:0051880,GO:0060249,GO:0060255,GO:0060542,GO:0061749,GO:0061820,GO:0061821,GO:0061849,GO:0062037,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070035,GO:0070336,GO:0070337,GO:0070727,GO:0071103,GO:0071214,GO:0071478,GO:0071479,GO:0071480,GO:0071496,GO:0071704,GO:0071840,GO:0071897,GO:0080090,GO:0090304,GO:0090305,GO:0090329,GO:0090656,GO:0090657,GO:0090737,GO:0097159,GO:0097458,GO:0098530,GO:0098687,GO:0104004,GO:0120025,GO:0140097,GO:1901360,GO:1901361,GO:1901362,GO:1901363,GO:1901575,GO:1901576,GO:1902570,GO:1905773,GO:2000104,GO:2000112,GO:2000113
EggNOG free text desc.3'-5' exonuclease activity
EggNOG OGsKOG4373@1,KOG4373@2759
EC3.1.11.1,3.6.4.12
COG Functional cat.C
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03032,ko03400
Exons8
Model size1965
Cds size594
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932794.0545492-CDS-F-serratus_M_contig996:196199..1963121622932794.0545492-CDS-F-serratus_M_contig996:196199..196312Fucus serratus maleCDSF-serratus_M_contig996 196200..196312 -
1690964478.7689776-CDS-F-serratus_M_contig996:196199..1963121690964478.7689776-CDS-F-serratus_M_contig996:196199..196312Fucus serratus maleCDSF-serratus_M_contig996 196200..196312 -
1622932794.0727265-CDS-F-serratus_M_contig996:196453..1967381622932794.0727265-CDS-F-serratus_M_contig996:196453..196738Fucus serratus maleCDSF-serratus_M_contig996 196454..196738 -
1690964478.7919762-CDS-F-serratus_M_contig996:196453..1967381690964478.7919762-CDS-F-serratus_M_contig996:196453..196738Fucus serratus maleCDSF-serratus_M_contig996 196454..196738 -
1622932794.0954623-CDS-F-serratus_M_contig996:196911..1971071622932794.0954623-CDS-F-serratus_M_contig996:196911..197107Fucus serratus maleCDSF-serratus_M_contig996 196912..197107 -
1690964478.8053546-CDS-F-serratus_M_contig996:196911..1971071690964478.8053546-CDS-F-serratus_M_contig996:196911..197107Fucus serratus maleCDSF-serratus_M_contig996 196912..197107 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932794.1119158-UTR-F-serratus_M_contig996:197107..1971661622932794.1119158-UTR-F-serratus_M_contig996:197107..197166Fucus serratus maleUTRF-serratus_M_contig996 197108..197166 -
1690964478.8207188-UTR-F-serratus_M_contig996:197107..1971661690964478.8207188-UTR-F-serratus_M_contig996:197107..197166Fucus serratus maleUTRF-serratus_M_contig996 197108..197166 -
1622932794.1312866-UTR-F-serratus_M_contig996:197259..1974461622932794.1312866-UTR-F-serratus_M_contig996:197259..197446Fucus serratus maleUTRF-serratus_M_contig996 197260..197446 -
1690964478.8319921-UTR-F-serratus_M_contig996:197259..1974461690964478.8319921-UTR-F-serratus_M_contig996:197259..197446Fucus serratus maleUTRF-serratus_M_contig996 197260..197446 -
1622932794.150199-UTR-F-serratus_M_contig996:197630..1980021622932794.150199-UTR-F-serratus_M_contig996:197630..198002Fucus serratus maleUTRF-serratus_M_contig996 197631..198002 -
1690964478.8430688-UTR-F-serratus_M_contig996:197630..1980021690964478.8430688-UTR-F-serratus_M_contig996:197630..198002Fucus serratus maleUTRF-serratus_M_contig996 197631..198002 -
1622932794.1691961-UTR-F-serratus_M_contig996:198189..1984081622932794.1691961-UTR-F-serratus_M_contig996:198189..198408Fucus serratus maleUTRF-serratus_M_contig996 198190..198408 -
1690964478.853889-UTR-F-serratus_M_contig996:198189..1984081690964478.853889-UTR-F-serratus_M_contig996:198189..198408Fucus serratus maleUTRF-serratus_M_contig996 198190..198408 -
1622932794.1951451-UTR-F-serratus_M_contig996:198614..1990461622932794.1951451-UTR-F-serratus_M_contig996:198614..199046Fucus serratus maleUTRF-serratus_M_contig996 198615..199046 -
1690964478.8651066-UTR-F-serratus_M_contig996:198614..1990461690964478.8651066-UTR-F-serratus_M_contig996:198614..199046Fucus serratus maleUTRF-serratus_M_contig996 198615..199046 -
1622932794.2151117-UTR-F-serratus_M_contig996:199254..1993561622932794.2151117-UTR-F-serratus_M_contig996:199254..199356Fucus serratus maleUTRF-serratus_M_contig996 199255..199356 -
1690964478.8759212-UTR-F-serratus_M_contig996:199254..1993561690964478.8759212-UTR-F-serratus_M_contig996:199254..199356Fucus serratus maleUTRF-serratus_M_contig996 199255..199356 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig996.21247.1prot_F-serratus_M_contig996.21247.1Fucus serratus malepolypeptideF-serratus_M_contig996 196200..197107 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig996.21247.1

>prot_F-serratus_M_contig996.21247.1 ID=prot_F-serratus_M_contig996.21247.1|Name=mRNA_F-serratus_M_contig996.21247.1|organism=Fucus serratus male|type=polypeptide|length=198bp
MDRVRRVWKQRYPSWSNQEIAADMRAKLSSHLLKHVPRIVPRPEILLPRY
DNVIETFKVVRDGATGDTLFTDRMHKAAALLRVHIDKGCLSDPNPDLVPL
LQITGRTKDGLDLIRSLKGTNRVENYHQLLRQLMGSYRASAIMAHYTMLL
HNYRWNHRMAGLHRGMDPDLLGYYSHWEVEDIQAITKGWYDDVPLYPG
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mRNA from alignment at F-serratus_M_contig996:196200..199356-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig996.21247.1 ID=mRNA_F-serratus_M_contig996.21247.1|Name=mRNA_F-serratus_M_contig996.21247.1|organism=Fucus serratus male|type=mRNA|length=3157bp|location=Sequence derived from alignment at F-serratus_M_contig996:196200..199356- (Fucus serratus male)
CGCCCCAAGCGGCAAGTCGGCGTCGCATCTCTGGGTGAGATCGTTCCTCA
TCTAAAGGCGCTCGCCAACCGGTACCTGACTCAGGGGTTCCGCCCCATCC
AGGTGGGTCGAAAGAGTGAGTTTTGCTTCGAGTGTTGTTTGGTCGGCGAT
CTGAAACCCCGGCCTTTGTAACCGGATACATGGCAACATATATGCTTTTG
TTTAGTACCAAAGCCGTTAATATATGTCCACCCGAAAGCCAAAAAATAGT
CGCTGAACCGATCACAACACACTCAACATGTAAACATTTTTTTCCGGCAT
TCTTTCGAAGGTATACTGGACAGACTTGTGCTGCGGGGATAGGAGCGCTG
TCCAATCAACGCTTGGACCGGCATCTGAGGCTGTACCGGATTTTACGTCG
TCCACATACTTCGGCGGCGAAGCTGAGCGGTCGCTCCCGAGTCTCGAGTT
CCCTGCCCATGTCTCACCAATTTTAGTGCGCGTGACCAGCGAGAATTGCG
AGCACTGTACCAGAATTTGCTTCGGGCTGTTGAAGCGCGCGCGAGAATCA
ACTCCTGCGGTGCTCGGCATCGACATTGAGTGGAGTGTGCGCCCATCCGA
GCCTCGTCGCCAAGTTTCACTTTTACAGTTGTCAGCACGCGACGGCTATA
CGGTCCTCTTCCACCTTAAGCATGACGAGCGCCGACCAGGAATCATGCCC
AAAGCTTTAAAAGAGCTGCTGATCAACGACACCGTTCAACTAGTAAGTTT
GGTTTACTGTTTTAAAGCTCGAAGCGTGGCACGAAAACGTATAATTTGCC
CCGACGACGTAAACAACACAAAAGAGAGCACGGACGTCAGCAAACGCAGT
ATGTCGATGTTTTTTCTATCTTTCAACTTGTCAATGCCAATGTCTTATTC
TGTCTACGATACTTCCCTGCGGTCTTCGTTGTCGTTGGTACTCTCCAGGC
AGGAGTTTCGGTTCGTGGCGACCTCAAACACATTTTGAACAGCTACGGTG
TTCAGGGCACAAACCCGGTCGATGTCGGTCAGTTGGCAGGGACGCATCTC
GGTGTCAAGATCGGGGCACGCTCGCTCCAAGCCCTGACGGCAACACTACT
CCGCCGACGACTTGCGAAGGGCACAGTTCGTACCAGCAATTGGGAGATGG
ATCTATCGAAGGAGCAGGTATGCTGATATTTTTCCGCTACTTCCCATGTA
GTATCGAGAAGCGGGATGATTCATGAGACGCGCTCAATTTTTTTCTTCTT
ATTTCAAGGCCTTACCGTCCAGTCAGCTCTTGTTGCACTCCCTCTCTGTT
GTTTTTGAATGCTCCCTGAAAAAACTATCTGTCCCAATGGTCTTGTCGTC
GCAGGTGAAATATGCAGGGCTTGATTCTTACGCCGACGTTCTCCTCTTTT
GCCATATTTGGGCACGAATGGACCCCATCTTCACGGAATGACGGCCGGAT
GTGCTATCGCTTCCTGTCAACACCCCTCTGCGCCTGTACACGAGTACAAA
TTCCCGCTGTGTGGCGGAGGGGACCCTTGTAGACTATCCTCAGGGATCCA
CTTGGGGAAGCACTGGCCTGACGATTGGGCGCGTGACGGGGGGTGCTACA
CGTATGGTGATAAAGTTGACGGCGAGGCATATCCCCGGAGCCTTCACGCT
ACACCCTCGTGAGGATGGCGGCCAAGTACAAGCACTGGACGAGCTTGAGC
TTGGGGATCTCGTTCTGTGGAATGCGGTAAGTTGGGATTGCTTTTGTGGG
CCTGTTTCTCCTGACTTGACTTCAAAACACAAGACTAAGTGCCGCGGGTT
GAGCATGATTCGCGATTGTGGAGCCAAAGGACGCTTTGCCGTGACCCATA
ACCCTAATCTATAACCCTAATCTGCGACGTGCACTGACCTCTTTTTGTTT
TCTTGGCCAGATTAATTCGAGACTACCGGCAGACCCTGGGCCAGTATCAT
CTTTGGGTGTCGTGGGGGCGGGTGACGTTGCTGGCGTTACAGGAACTAGT
TCGACGTCGACACTTGAGCCTGGAGGGTAAGTGGAAGGGTCGGCGTCCGC
GTTGGGTACGACAGGGGTGGGTGGCGTCACTAGCGCCGCCGGAGCCAGTC
CTTCAAATGACGGAGGCAAGCCAGTGACCAAGCTTGACATTTGGCACGGC
GAGCATCGGGTCATCGTCTGTGCGTCGAAAAAAAACGGAGCGTATGGCCC
TTTTTGCGCTGCTCTACGGGATGCTTTCACAATACCTGATCCTGAAGCCA
TGGACCGCGTGAGGAGAGTATGGAAGCAGCGGTATCCTTCGTGGAGTAAC
CAGGAGATCGCGGCGGACATGAGGGCGAAACTCTCGAGTCACCTCTTGAA
ACATGTCCCACGGATAGTGCCTCGTCCGGAGATTCTTCTACCGCGATATG
ACAACGTCATCGAGACTTTCAAGGTTGTTCGTGACGGCGCGACAGGTAAT
ACTTGAGTTGGTTGTTCTTAATCGACCCGCTGGCTGTATTTCTTTCTTCA
ATCGAGCGCCTGGCTGAGTTCTTGGCTTTCGTATTACGACCTGTTTCATA
GTGGCATATTCAAACAATTAAACTCTTCTTCTCGTTTTTTTTTCGCGCGT
TGATGTTTTCCTGATCAGGCGACACGCTTTTCACGGACCGCATGCACAAG
GCCGCGGCTCTCCTCCGCGTCCACATCGACAAAGGGTGCTTGTCGGACCC
AAATCCGGACCTCGTTCCGTTACTCCAGATCACGGGGCGCACGAAGGACG
GTCTAGATTTGATTCGGTCACTAAAAGGCACCAACCGTGTGGAAAACTAC
CACCAACTGCTGCGCCAGCTGATGGGATCCTATCGTGCTTCTGCCATCAT
GGCACATTACACCATGCTCCTACATAACTACAGGTGGAACCATCGCATGG
CCGGTACATCAAAGTTGTGAGGTCGCGCAGACGTTCTTCTGTTGTTGTTT
TTTTAGCCAGAGCAGGCGGGAAGGTCTGCGAGGACGATTGCAGGAATGTA
AAGTAACGTGGATTCCGTTACTATATTTTTGCTTCGATCTATAGGTTTGC
ACAGGGGTATGGACCCCGACTTGCTCGGCTACTACAGCCACTGGGAAGTT
GAGGACATCCAAGCTATCACCAAGGGGTGGTACGACGACGTGCCTCTCTA
TCCTGGC
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Coding sequence (CDS) from alignment at F-serratus_M_contig996:196200..199356-

>mRNA_F-serratus_M_contig996.21247.1 ID=mRNA_F-serratus_M_contig996.21247.1|Name=mRNA_F-serratus_M_contig996.21247.1|organism=Fucus serratus male|type=CDS|length=1188bp|location=Sequence derived from alignment at F-serratus_M_contig996:196200..199356- (Fucus serratus male)
ATGGACCGCGTGAGGAGAGTATGGAAGCAGCGGTATCCTTCGTGGAGTAA
CCAGGAGATCGCGGCGGACATGAGGGCGAAACTCTCGAGTCACCTCTTGA
AACATGTCCCACGGATAGTGCCTCGTCCGGAGATTCTTCTACCGCGATAT
GACAACGTCATCGAGACTTTCAAGGTTGTTCGTGACGGCGCGACAGATGG
ACCGCGTGAGGAGAGTATGGAAGCAGCGGTATCCTTCGTGGAGTAACCAG
GAGATCGCGGCGGACATGAGGGCGAAACTCTCGAGTCACCTCTTGAAACA
TGTCCCACGGATAGTGCCTCGTCCGGAGATTCTTCTACCGCGATATGACA
ACGTCATCGAGACTTTCAAGGTTGTTCGTGACGGCGCGACAGGCGACACG
CTTTTCACGGACCGCATGCACAAGGCCGCGGCTCTCCTCCGCGTCCACAT
CGACAAAGGGTGCTTGTCGGACCCAAATCCGGACCTCGTTCCGTTACTCC
AGATCACGGGGCGCACGAAGGACGGTCTAGATTTGATTCGGTCACTAAAA
GGCACCAACCGTGTGGAAAACTACCACCAACTGCTGCGCCAGCTGATGGG
ATCCTATCGTGCTTCTGCCATCATGGCACATTACACCATGCTCCTACATA
ACTACAGGTGGAACCATCGCATGGCCGGCGACACGCTTTTCACGGACCGC
ATGCACAAGGCCGCGGCTCTCCTCCGCGTCCACATCGACAAAGGGTGCTT
GTCGGACCCAAATCCGGACCTCGTTCCGTTACTCCAGATCACGGGGCGCA
CGAAGGACGGTCTAGATTTGATTCGGTCACTAAAAGGCACCAACCGTGTG
GAAAACTACCACCAACTGCTGCGCCAGCTGATGGGATCCTATCGTGCTTC
TGCCATCATGGCACATTACACCATGCTCCTACATAACTACAGGTGGAACC
ATCGCATGGCCGGTTTGCACAGGGGTATGGACCCCGACTTGCTCGGCTAC
TACAGCCACTGGGAAGTTGAGGACATCCAAGCTATCACCAAGGGGTGGTA
CGACGACGTGCCTCTCTATCCTGGCGTTTGCACAGGGGTATGGACCCCGA
CTTGCTCGGCTACTACAGCCACTGGGAAGTTGAGGACATCCAAGCTATCA
CCAAGGGGTGGTACGACGACGTGCCTCTCTATCCTGGC
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